MOLECULE: [GraphModel] [Vertices] 0 9R:G 0 1 10R:A 0 2 11R:U 0 3 12R:U 0 4 13R:A 0 5 14R:C 0 [Edges] 0 {9R:G -> 10R:A: adjacent_5p upward } 0 1 {10R:A -> 9R:G: adjacent_3p downward } 0 2 {9R:G -> 14R:C: pairing antiparallel cis Ww/Ww } 0 3 {14R:C -> 9R:G: pairing antiparallel cis Ww/Ww } 0 4 {10R:A -> 11R:U: adjacent_5p upward } 0 5 {11R:U -> 10R:A: adjacent_3p downward } 0 6 {11R:U -> 12R:U: adjacent_5p } 0 7 {12R:U -> 11R:U: adjacent_3p } 0 8 {12R:U -> 13R:A: adjacent_5p } 0 9 {13R:A -> 12R:U: adjacent_3p } 0 10 {13R:A -> 14R:C: adjacent_5p } 0 11 {14R:C -> 13R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 6R:C 0 1 7R:U 0 2 8R:C 0 3 9R:A 0 4 10R:A 0 5 11R:C 0 [Edges] 0 {6R:C -> 7R:U: adjacent_5p } 0 1 {7R:U -> 6R:C: adjacent_3p } 0 2 {6R:C -> 11R:C: pairing antiparallel cis one_hbond 131 Ww/Wh } 0 3 {11R:C -> 6R:C: pairing antiparallel cis one_hbond 131 Wh/Ww } 0 4 {7R:U -> 8R:C: adjacent_5p } 0 5 {8R:C -> 7R:U: adjacent_3p } 0 6 {8R:C -> 9R:A: adjacent_5p } 0 7 {9R:A -> 8R:C: adjacent_3p } 0 8 {9R:A -> 10R:A: adjacent_5p upward } 0 9 {10R:A -> 9R:A: adjacent_3p downward } 0 10 {10R:A -> 11R:C: adjacent_5p upward } 0 11 {11R:C -> 10R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 30R:G 0 1 31R:G 0 2 32R:G 0 3 33R:U 0 4 34R:C 0 5 35R:A 0 [Edges] 0 {30R:G -> 31R:G: adjacent_5p upward } 0 1 {31R:G -> 30R:G: adjacent_3p downward } 0 2 {30R:G -> 35R:A: pairing antiparallel cis one_hbond Bs/Ww } 0 3 {35R:A -> 30R:G: pairing antiparallel cis one_hbond Ww/Bs } 0 4 {31R:G -> 32R:G: adjacent_5p upward } 0 5 {32R:G -> 31R:G: adjacent_3p downward } 0 6 {32R:G -> 33R:U: adjacent_5p } 0 7 {33R:U -> 32R:G: adjacent_3p } 0 8 {33R:U -> 34R:C: adjacent_5p } 0 9 {34R:C -> 33R:U: adjacent_3p } 0 10 {34R:C -> 35R:A: adjacent_5p } 0 11 {35R:A -> 34R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 4R:G 0 1 5R:U 0 2 6R:G 0 3 7R:A 0 4 8R:A 0 5 9R:C 0 [Edges] 0 {4R:G -> 5R:U: adjacent_5p upward } 0 1 {5R:U -> 4R:G: adjacent_3p downward } 0 2 {4R:G -> 9R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {9R:C -> 4R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {5R:U -> 6R:G: adjacent_5p inward } 0 5 {6R:G -> 5R:U: adjacent_3p inward } 0 6 {6R:G -> 7R:A: adjacent_5p } 0 7 {7R:A -> 6R:G: adjacent_3p } 0 8 {7R:A -> 8R:A: adjacent_5p upward } 0 9 {8R:A -> 7R:A: adjacent_3p downward } 0 10 {8R:A -> 9R:C: adjacent_5p upward } 0 11 {9R:C -> 8R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 7R:G 0 1 8R:G 0 2 9R:A 0 3 10R:A 0 4 11R:A 0 5 12R:C 0 [Edges] 0 {7R:G -> 8R:G: adjacent_5p upward } 0 1 {8R:G -> 7R:G: adjacent_3p downward } 0 2 {7R:G -> 12R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {12R:C -> 7R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {8R:G -> 9R:A: adjacent_5p } 0 5 {9R:A -> 8R:G: adjacent_3p } 0 6 {8R:G -> 11R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {11R:A -> 8R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {9R:A -> 10R:A: adjacent_5p upward } 0 9 {10R:A -> 9R:A: adjacent_3p downward } 0 10 {10R:A -> 11R:A: adjacent_5p upward } 0 11 {11R:A -> 10R:A: adjacent_3p downward } 0 12 {11R:A -> 12R:C: adjacent_5p upward } 0 13 {12R:C -> 11R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 6R:C 0 1 7R:A 0 2 8R:G 0 3 9R:A 0 4 10R:A 0 5 11R:G 0 [Edges] 0 {6R:C -> 7R:A: adjacent_5p } 0 1 {7R:A -> 6R:C: adjacent_3p } 0 2 {6R:C -> 11R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {11R:G -> 6R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {7R:A -> 8R:G: adjacent_5p } 0 5 {8R:G -> 7R:A: adjacent_3p } 0 6 {7R:A -> 10R:A: pairing antiparallel cis one_hbond 40 Ss/Wh } 0 7 {10R:A -> 7R:A: pairing antiparallel cis one_hbond 40 Wh/Ss } 0 8 {8R:G -> 9R:A: adjacent_5p } 0 9 {9R:A -> 8R:G: adjacent_3p } 0 10 {9R:A -> 10R:A: adjacent_5p upward } 0 11 {10R:A -> 9R:A: adjacent_3p downward } 0 12 {10R:A -> 11R:G: adjacent_5p upward } 0 13 {11R:G -> 10R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 5R:C 0 1 6R:A 0 2 7R:G 0 3 8R:A 0 4 9R:U 0 5 10R:G 0 [Edges] 0 {5R:C -> 6R:A: adjacent_5p } 0 1 {6R:A -> 5R:C: adjacent_3p } 0 2 {5R:C -> 10R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {10R:G -> 5R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {6R:A -> 7R:G: adjacent_5p } 0 5 {7R:G -> 6R:A: adjacent_3p } 0 6 {7R:G -> 8R:A: adjacent_5p } 0 7 {8R:A -> 7R:G: adjacent_3p } 0 8 {8R:A -> 9R:U: adjacent_5p upward } 0 9 {9R:U -> 8R:A: adjacent_3p downward } 0 10 {9R:U -> 10R:G: adjacent_5p } 0 11 {10R:G -> 9R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 B28R:C 0 1 B29R:U 0 2 B30R:U 0 3 B33R:C 0 4 B34R:G 0 5 B35R:G 0 [Edges] 0 {B28R:C -> B29R:U: adjacent_5p upward } 0 1 {B29R:U -> B28R:C: adjacent_3p downward } 0 2 {B28R:C -> B35R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {B35R:G -> B28R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {B29R:U -> B30R:U: adjacent_5p } 0 5 {B30R:U -> B29R:U: adjacent_3p } 0 6 {B30R:U -> B33R:C: adjacent_5p } 0 7 {B33R:C -> B30R:U: adjacent_3p } 0 8 {B33R:C -> B34R:G: adjacent_5p } 0 9 {B34R:G -> B33R:C: adjacent_3p } 0 10 {B34R:G -> B35R:G: adjacent_5p outward } 0 11 {B35R:G -> B34R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A16R:C 0 1 A17R:U 0 2 A18R:U 0 3 A19R:C 0 4 A20R:G 0 5 A21R:G 0 [Edges] 0 {A16R:C -> A17R:U: adjacent_5p upward } 0 1 {A17R:U -> A16R:C: adjacent_3p downward } 0 2 {A16R:C -> A21R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A21R:G -> A16R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A17R:U -> A18R:U: adjacent_5p } 0 5 {A18R:U -> A17R:U: adjacent_3p } 0 6 {A17R:U -> A19R:C: upward } 0 7 {A19R:C -> A17R:U: downward } 0 8 {A17R:U -> A20R:G: pairing parallel trans one_hbond 87 Bs/Ww } 0 9 {A20R:G -> A17R:U: pairing parallel trans one_hbond 87 Ww/Bs } 0 10 {A18R:U -> A19R:C: adjacent_5p } 0 11 {A19R:C -> A18R:U: adjacent_3p } 0 12 {A19R:C -> A20R:G: adjacent_5p } 0 13 {A20R:G -> A19R:C: adjacent_3p } 0 14 {A20R:G -> A21R:G: adjacent_5p outward } 0 15 {A21R:G -> A20R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 . 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . 9 . 13 . 14 5 3 . . . 15 . MOLECULE: [GraphModel] [Vertices] 0 10R:C 0 1 11R:U 0 2 12R:U 0 3 13R:C 0 4 14R:G 0 5 15R:G 0 [Edges] 0 {10R:C -> 11R:U: adjacent_5p upward } 0 1 {11R:U -> 10R:C: adjacent_3p downward } 0 2 {10R:C -> 15R:G: pairing antiparallel cis one_hbond 130 Ws/Ww } 0 3 {15R:G -> 10R:C: pairing antiparallel cis one_hbond 130 Ww/Ws } 0 4 {11R:U -> 12R:U: adjacent_5p } 0 5 {12R:U -> 11R:U: adjacent_3p } 0 6 {12R:U -> 13R:C: adjacent_5p } 0 7 {13R:C -> 12R:U: adjacent_3p } 0 8 {13R:C -> 14R:G: adjacent_5p } 0 9 {14R:G -> 13R:C: adjacent_3p } 0 10 {14R:G -> 15R:G: adjacent_5p outward } 0 11 {15R:G -> 14R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 8R:C 0 1 9R:G 0 2 10R:G 0 3 11R:A 0 4 12R:G 0 5 13R:G 0 [Edges] 0 {8R:C -> 9R:G: adjacent_5p } 0 1 {9R:G -> 8R:C: adjacent_3p } 0 2 {8R:C -> 13R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {13R:G -> 8R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {9R:G -> 10R:G: adjacent_5p } 0 5 {10R:G -> 9R:G: adjacent_3p } 0 6 {9R:G -> 11R:A: pairing parallel cis one_hbond Wh/Hw } 0 7 {11R:A -> 9R:G: pairing parallel cis one_hbond Hw/Wh } 0 8 {10R:G -> 11R:A: adjacent_5p } 0 9 {11R:A -> 10R:G: adjacent_3p } 0 10 {11R:A -> 12R:G: adjacent_5p } 0 11 {12R:G -> 11R:A: adjacent_3p } 0 12 {12R:G -> 13R:G: adjacent_5p } 0 13 {13R:G -> 12R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A10R:G 0 1 A11R:U 0 2 A12R:A 0 3 A13R:A 0 4 A14R:A 0 5 A15R:A 0 [Edges] 0 {A10R:G -> A11R:U: adjacent_5p upward } 0 1 {A11R:U -> A10R:G: adjacent_3p downward } 0 2 {A10R:G -> A15R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A15R:A -> A10R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A11R:U -> A12R:A: adjacent_5p } 0 5 {A12R:A -> A11R:U: adjacent_3p } 0 6 {A12R:A -> A13R:A: adjacent_5p upward } 0 7 {A13R:A -> A12R:A: adjacent_3p downward } 0 8 {A13R:A -> A14R:A: adjacent_5p upward } 0 9 {A14R:A -> A13R:A: adjacent_3p downward } 0 10 {A14R:A -> A15R:A: adjacent_5p upward } 0 11 {A15R:A -> A14R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A11R:C 0 1 A12R:U 0 2 A13R:U 0 3 A14R:C 0 4 A15R:G 0 5 A16R:G 0 [Edges] 0 {A11R:C -> A12R:U: adjacent_5p upward } 0 1 {A12R:U -> A11R:C: adjacent_3p downward } 0 2 {A11R:C -> A16R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A16R:G -> A11R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A12R:U -> A13R:U: adjacent_5p } 0 5 {A13R:U -> A12R:U: adjacent_3p } 0 6 {A12R:U -> A14R:C: upward } 0 7 {A14R:C -> A12R:U: downward } 0 8 {A12R:U -> A15R:G: pairing parallel trans 87 Bs/Ww } 0 9 {A15R:G -> A12R:U: pairing parallel trans 87 Ww/Bs } 0 10 {A13R:U -> A14R:C: adjacent_5p } 0 11 {A14R:C -> A13R:U: adjacent_3p } 0 12 {A14R:C -> A15R:G: adjacent_5p } 0 13 {A15R:G -> A14R:C: adjacent_3p } 0 14 {A15R:G -> A16R:G: adjacent_5p outward } 0 15 {A16R:G -> A15R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 . 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . 9 . 13 . 14 5 3 . . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A5R:C 0 1 A6R:U 0 2 A7R:U 0 3 A8R:C 0 4 A9R:G 0 5 A10R:G 0 [Edges] 0 {A5R:C -> A6R:U: adjacent_5p upward } 0 1 {A6R:U -> A5R:C: adjacent_3p downward } 0 2 {A5R:C -> A10R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A10R:G -> A5R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A6R:U -> A7R:U: adjacent_5p } 0 5 {A7R:U -> A6R:U: adjacent_3p } 0 6 {A7R:U -> A8R:C: adjacent_5p } 0 7 {A8R:C -> A7R:U: adjacent_3p } 0 8 {A8R:C -> A9R:G: adjacent_5p } 0 9 {A9R:G -> A8R:C: adjacent_3p } 0 10 {A9R:G -> A10R:G: adjacent_5p outward } 0 11 {A10R:G -> A9R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A17R:C 0 1 A18R:G 0 2 A19R:C 0 3 A20R:A 0 4 A21R:A 0 5 A50R:G 0 [Edges] 0 {A17R:C -> A18R:G: adjacent_5p upward } 0 1 {A18R:G -> A17R:C: adjacent_3p downward } 0 2 {A17R:C -> A50R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A50R:G -> A17R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A18R:G -> A19R:C: adjacent_5p } 0 5 {A19R:C -> A18R:G: adjacent_3p } 0 6 {A18R:G -> A21R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A21R:A -> A18R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A18R:G -> A50R:G: outward } 0 9 {A50R:G -> A18R:G: outward } 0 10 {A19R:C -> A20R:A: adjacent_5p } 0 11 {A20R:A -> A19R:C: adjacent_3p } 0 12 {A20R:A -> A21R:A: adjacent_5p upward } 0 13 {A21R:A -> A20R:A: adjacent_3p downward } 0 14 {A21R:A -> A50R:G: adjacent_5p } 0 15 {A50R:G -> A21R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A21R:C 0 1 A22R:G 0 2 A23R:G 0 3 A24R:A 0 4 A25R:A 0 5 A26R:G 0 [Edges] 0 {A21R:C -> A22R:G: adjacent_5p upward } 0 1 {A22R:G -> A21R:C: adjacent_3p downward } 0 2 {A21R:C -> A26R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A26R:G -> A21R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A22R:G -> A23R:G: adjacent_5p } 0 5 {A23R:G -> A22R:G: adjacent_3p } 0 6 {A22R:G -> A25R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A25R:A -> A22R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A23R:G -> A24R:A: adjacent_5p upward } 0 9 {A24R:A -> A23R:G: adjacent_3p downward } 0 10 {A24R:A -> A25R:A: adjacent_5p upward } 0 11 {A25R:A -> A24R:A: adjacent_3p downward } 0 12 {A25R:A -> A26R:G: adjacent_5p upward } 0 13 {A26R:G -> A25R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A9R:C 0 1 A10R:A 0 2 A11R:U 0 3 A12R:U 0 4 A13R:A 0 5 A14R:G 0 [Edges] 0 {A9R:C -> A10R:A: adjacent_5p upward } 0 1 {A10R:A -> A9R:C: adjacent_3p downward } 0 2 {A9R:C -> A14R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A14R:G -> A9R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A10R:A -> A11R:U: adjacent_5p upward } 0 5 {A11R:U -> A10R:A: adjacent_3p downward } 0 6 {A11R:U -> A12R:U: adjacent_5p } 0 7 {A12R:U -> A11R:U: adjacent_3p } 0 8 {A12R:U -> A13R:A: adjacent_5p } 0 9 {A13R:A -> A12R:U: adjacent_3p } 0 10 {A13R:A -> A14R:G: adjacent_5p } 0 11 {A14R:G -> A13R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 B283R:C 0 1 B284R:U 0 2 B285R:U 0 3 B291R:C 0 4 B292R:G 0 5 B293R:G 0 [Edges] 0 {B283R:C -> B284R:U: adjacent_5p upward } 0 1 {B284R:U -> B283R:C: adjacent_3p downward } 0 2 {B283R:C -> B293R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {B293R:G -> B283R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {B284R:U -> B285R:U: adjacent_5p } 0 5 {B285R:U -> B284R:U: adjacent_3p } 0 6 {B284R:U -> B292R:G: pairing parallel trans one_hbond Ss/Ws } 0 7 {B292R:G -> B284R:U: pairing parallel trans one_hbond Ws/Ss } 0 8 {B285R:U -> B291R:C: adjacent_5p } 0 9 {B291R:C -> B285R:U: adjacent_3p } 0 10 {B291R:C -> B292R:G: adjacent_5p } 0 11 {B292R:G -> B291R:C: adjacent_3p } 0 12 {B292R:G -> B293R:G: adjacent_5p } 0 13 {B293R:G -> B292R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 B153R:C 0 1 B154R:G 0 2 B155R:A 0 3 B156R:A 0 4 B157R:A 0 5 B158R:G 0 [Edges] 0 {B153R:C -> B154R:G: adjacent_5p upward } 0 1 {B154R:G -> B153R:C: adjacent_3p downward } 0 2 {B153R:C -> B158R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {B158R:G -> B153R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {B154R:G -> B155R:A: adjacent_5p } 0 5 {B155R:A -> B154R:G: adjacent_3p } 0 6 {B154R:G -> B157R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 7 {B157R:A -> B154R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 8 {B154R:G -> B158R:G: outward } 0 9 {B158R:G -> B154R:G: outward } 0 10 {B155R:A -> B156R:A: adjacent_5p upward } 0 11 {B156R:A -> B155R:A: adjacent_3p downward } 0 12 {B156R:A -> B157R:A: adjacent_5p upward } 0 13 {B157R:A -> B156R:A: adjacent_3p downward } 0 14 {B157R:A -> B158R:G: adjacent_5p } 0 15 {B158R:G -> B157R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A10R:C 0 1 A11R:G 0 2 A12R:A 0 3 A13R:A 0 4 A14R:A 0 5 A15R:G 0 [Edges] 0 {A10R:C -> A11R:G: adjacent_5p upward } 0 1 {A11R:G -> A10R:C: adjacent_3p downward } 0 2 {A10R:C -> A15R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A15R:G -> A10R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A11R:G -> A12R:A: adjacent_5p } 0 5 {A12R:A -> A11R:G: adjacent_3p } 0 6 {A12R:A -> A13R:A: adjacent_5p upward } 0 7 {A13R:A -> A12R:A: adjacent_3p downward } 0 8 {A13R:A -> A14R:A: adjacent_5p upward } 0 9 {A14R:A -> A13R:A: adjacent_3p downward } 0 10 {A14R:A -> A15R:G: adjacent_5p upward } 0 11 {A15R:G -> A14R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 12R:C 0 1 13R:U 0 2 14R:U 0 3 15R:C 0 4 16R:G 0 5 17R:G 0 [Edges] 0 {12R:C -> 13R:U: adjacent_5p upward } 0 1 {13R:U -> 12R:C: adjacent_3p downward } 0 2 {12R:C -> 17R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {17R:G -> 12R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {13R:U -> 14R:U: adjacent_5p } 0 5 {14R:U -> 13R:U: adjacent_3p } 0 6 {13R:U -> 15R:C: upward } 0 7 {15R:C -> 13R:U: downward } 0 8 {13R:U -> 16R:G: pairing parallel trans one_hbond Bs/Ww } 0 9 {16R:G -> 13R:U: pairing parallel trans one_hbond Ww/Bs } 0 10 {14R:U -> 15R:C: adjacent_5p } 0 11 {15R:C -> 14R:U: adjacent_3p } 0 12 {15R:C -> 16R:G: adjacent_5p } 0 13 {16R:G -> 15R:C: adjacent_3p } 0 14 {16R:G -> 17R:G: adjacent_5p outward } 0 15 {17R:G -> 16R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 . 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . 9 . 13 . 14 5 3 . . . 15 . MOLECULE: [GraphModel] [Vertices] 0 B13R:C 0 1 B14R:U 0 2 B15R:U 0 3 B16R:C 0 4 B17R:G 0 5 B18R:G 0 [Edges] 0 {B13R:C -> B14R:U: adjacent_5p upward } 0 1 {B14R:U -> B13R:C: adjacent_3p downward } 0 2 {B13R:C -> B18R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {B18R:G -> B13R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {B14R:U -> B15R:U: adjacent_5p } 0 5 {B15R:U -> B14R:U: adjacent_3p } 0 6 {B14R:U -> B17R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 7 {B17R:G -> B14R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 8 {B15R:U -> B16R:C: adjacent_5p } 0 9 {B16R:C -> B15R:U: adjacent_3p } 0 10 {B16R:C -> B17R:G: adjacent_5p upward } 0 11 {B17R:G -> B16R:C: adjacent_3p downward } 0 12 {B17R:G -> B18R:G: adjacent_5p upward } 0 13 {B18R:G -> B17R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A12R:C 0 1 A13R:G 0 2 A14R:C 0 3 A15R:A 0 4 A16R:A 0 5 A17R:G 0 [Edges] 0 {A12R:C -> A13R:G: adjacent_5p upward } 0 1 {A13R:G -> A12R:C: adjacent_3p downward } 0 2 {A12R:C -> A17R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A17R:G -> A12R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A13R:G -> A14R:C: adjacent_5p } 0 5 {A14R:C -> A13R:G: adjacent_3p } 0 6 {A14R:C -> A15R:A: adjacent_5p } 0 7 {A15R:A -> A14R:C: adjacent_3p } 0 8 {A15R:A -> A16R:A: adjacent_5p upward } 0 9 {A16R:A -> A15R:A: adjacent_3p downward } 0 10 {A16R:A -> A17R:G: adjacent_5p upward } 0 11 {A17R:G -> A16R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A7R:A 0 1 A8R:G 0 2 A9R:A 0 3 A10R:C 0 4 A11R:G 0 5 A12R:U 0 [Edges] 0 {A7R:A -> A8R:G: adjacent_5p upward } 0 1 {A8R:G -> A7R:A: adjacent_3p downward } 0 2 {A7R:A -> A12R:U: pairing antiparallel cis XX Ww/Ww } 0 3 {A12R:U -> A7R:A: pairing antiparallel cis XX Ww/Ww } 0 4 {A8R:G -> A9R:A: adjacent_5p } 0 5 {A9R:A -> A8R:G: adjacent_3p } 0 6 {A8R:G -> A11R:G: pairing antiparallel trans one_hbond 108 Sw/Hh } 0 7 {A11R:G -> A8R:G: pairing antiparallel trans one_hbond 108 Hh/Sw } 0 8 {A9R:A -> A10R:C: adjacent_5p upward } 0 9 {A10R:C -> A9R:A: adjacent_3p downward } 0 10 {A10R:C -> A11R:G: adjacent_5p upward } 0 11 {A11R:G -> A10R:C: adjacent_3p downward } 0 12 {A11R:G -> A12R:U: adjacent_5p } 0 13 {A12R:U -> A11R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 B7R:A 0 1 B8R:G 0 2 B9R:A 0 3 B10R:C 0 4 B11R:G 0 5 B12R:U 0 [Edges] 0 {B7R:A -> B8R:G: adjacent_5p upward } 0 1 {B8R:G -> B7R:A: adjacent_3p downward } 0 2 {B7R:A -> B12R:U: pairing antiparallel cis XX Ww/Ww } 0 3 {B12R:U -> B7R:A: pairing antiparallel cis XX Ww/Ww } 0 4 {B8R:G -> B9R:A: adjacent_5p } 0 5 {B9R:A -> B8R:G: adjacent_3p } 0 6 {B8R:G -> B10R:C: pairing antiparallel trans one_hbond Ss/Hh } 0 7 {B10R:C -> B8R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 8 {B8R:G -> B11R:G: pairing antiparallel trans one_hbond 108 Sw/Hh } 0 9 {B11R:G -> B8R:G: pairing antiparallel trans one_hbond 108 Hh/Sw } 0 10 {B9R:A -> B10R:C: adjacent_5p upward } 0 11 {B10R:C -> B9R:A: adjacent_3p downward } 0 12 {B10R:C -> B11R:G: adjacent_5p upward } 0 13 {B11R:G -> B10R:C: adjacent_3p downward } 0 14 {B11R:G -> B12R:U: adjacent_5p } 0 15 {B12R:U -> B11R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 . 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . 9 . 13 . 14 5 3 . . . 15 . MOLECULE: [GraphModel] [Vertices] 0 B207R:U 0 1 B208R:G 0 2 B209R:G 0 3 B210R:U 0 4 B211R:G 0 5 B212R:A 0 [Edges] 0 {B207R:U -> B208R:G: adjacent_5p upward } 0 1 {B208R:G -> B207R:U: adjacent_3p downward } 0 2 {B207R:U -> B212R:A: pairing antiparallel cis XX Ww/Ww } 0 3 {B212R:A -> B207R:U: pairing antiparallel cis XX Ww/Ww } 0 4 {B208R:G -> B209R:G: adjacent_5p } 0 5 {B209R:G -> B208R:G: adjacent_3p } 0 6 {B209R:G -> B210R:U: adjacent_5p } 0 7 {B210R:U -> B209R:G: adjacent_3p } 0 8 {B210R:U -> B211R:G: adjacent_5p } 0 9 {B211R:G -> B210R:U: adjacent_3p } 0 10 {B211R:G -> B212R:A: adjacent_5p } 0 11 {B212R:A -> B211R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A12R:C 0 1 A13R:U 0 2 A14R:U 0 3 A15R:C 0 4 A16R:G 0 5 A17R:G 0 [Edges] 0 {A12R:C -> A13R:U: adjacent_5p upward } 0 1 {A13R:U -> A12R:C: adjacent_3p downward } 0 2 {A12R:C -> A17R:G: pairing antiparallel cis Ww/Ww } 0 3 {A17R:G -> A12R:C: pairing antiparallel cis Ww/Ww } 0 4 {A13R:U -> A14R:U: adjacent_5p } 0 5 {A14R:U -> A13R:U: adjacent_3p } 0 6 {A14R:U -> A15R:C: adjacent_5p } 0 7 {A15R:C -> A14R:U: adjacent_3p } 0 8 {A15R:C -> A16R:G: adjacent_5p inward } 0 9 {A16R:G -> A15R:C: adjacent_3p inward } 0 10 {A16R:G -> A17R:G: adjacent_5p outward } 0 11 {A17R:G -> A16R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A12R:C 0 1 A13R:U 0 2 A14R:U 0 3 A15R:C 0 4 A16R:G 0 5 A17R:G 0 [Edges] 0 {A12R:C -> A13R:U: adjacent_5p upward } 0 1 {A13R:U -> A12R:C: adjacent_3p downward } 0 2 {A12R:C -> A17R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A17R:G -> A12R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A13R:U -> A14R:U: adjacent_5p } 0 5 {A14R:U -> A13R:U: adjacent_3p } 0 6 {A13R:U -> A16R:G: pairing parallel trans one_hbond Ss/Ww } 0 7 {A16R:G -> A13R:U: pairing parallel trans one_hbond Ww/Ss } 0 8 {A14R:U -> A15R:C: adjacent_5p } 0 9 {A15R:C -> A14R:U: adjacent_3p } 0 10 {A14R:U -> A17R:G: pairing parallel trans one_hbond 89 Hw/Sw } 0 11 {A17R:G -> A14R:U: pairing parallel trans one_hbond 89 Sw/Hw } 0 12 {A15R:C -> A16R:G: adjacent_5p } 0 13 {A16R:G -> A15R:C: adjacent_3p } 0 14 {A16R:G -> A17R:G: adjacent_5p } 0 15 {A17R:G -> A16R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . 10 3 . . 9 . 12 . 4 . 7 . 13 . 14 5 3 . 11 . 15 . MOLECULE: [GraphModel] [Vertices] 0 A5R:U 0 1 A6R:G 0 2 A7R:A 0 3 A8R:U 0 4 A9R:A 0 5 A10R:G 0 [Edges] 0 {A5R:U -> A6R:G: adjacent_5p upward } 0 1 {A6R:G -> A5R:U: adjacent_3p downward } 0 2 {A5R:U -> A10R:G: pairing antiparallel cis one_hbond Bs/Ww } 0 3 {A10R:G -> A5R:U: pairing antiparallel cis one_hbond Ww/Bs } 0 4 {A6R:G -> A7R:A: adjacent_5p upward } 0 5 {A7R:A -> A6R:G: adjacent_3p downward } 0 6 {A6R:G -> A9R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A9R:A -> A6R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A7R:A -> A8R:U: adjacent_5p } 0 9 {A8R:U -> A7R:A: adjacent_3p } 0 10 {A8R:U -> A9R:A: adjacent_5p } 0 11 {A9R:A -> A8R:U: adjacent_3p } 0 12 {A9R:A -> A10R:G: adjacent_5p upward } 0 13 {A10R:G -> A9R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A9R:C 0 1 A10R:G 0 2 A11R:A 0 3 A12R:A 0 4 A13R:A 0 5 A14R:G 0 [Edges] 0 {A9R:C -> A10R:G: adjacent_5p } 0 1 {A10R:G -> A9R:C: adjacent_3p } 0 2 {A9R:C -> A14R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A14R:G -> A9R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A10R:G -> A11R:A: adjacent_5p } 0 5 {A11R:A -> A10R:G: adjacent_3p } 0 6 {A11R:A -> A12R:A: adjacent_5p upward } 0 7 {A12R:A -> A11R:A: adjacent_3p downward } 0 8 {A12R:A -> A13R:A: adjacent_5p upward } 0 9 {A13R:A -> A12R:A: adjacent_3p downward } 0 10 {A13R:A -> A14R:G: adjacent_5p } 0 11 {A14R:G -> A13R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A2069R:U 0 1 A2070R:G 0 2 A2071R:C 0 3 A2072R:G 0 4 A2073R:G 0 5 A2074R:A 0 [Edges] 0 {A2069R:U -> A2070R:G: adjacent_5p upward } 0 1 {A2070R:G -> A2069R:U: adjacent_3p downward } 0 2 {A2069R:U -> A2074R:A: pairing antiparallel trans XXIV Ws/Hh } 0 3 {A2074R:A -> A2069R:U: pairing antiparallel trans XXIV Hh/Ws } 0 4 {A2070R:G -> A2071R:C: adjacent_5p } 0 5 {A2071R:C -> A2070R:G: adjacent_3p } 0 6 {A2071R:C -> A2072R:G: adjacent_5p } 0 7 {A2072R:G -> A2071R:C: adjacent_3p } 0 8 {A2072R:G -> A2073R:G: adjacent_5p } 0 9 {A2073R:G -> A2072R:G: adjacent_3p } 0 10 {A2073R:G -> A2074R:A: adjacent_5p } 0 11 {A2074R:A -> A2073R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A2248R:C 0 1 A2249R:G 0 2 A2250R:G 0 3 A2251R:G 0 4 A2252R:A 0 5 A2253R:G 0 [Edges] 0 {A2248R:C -> A2249R:G: adjacent_5p upward } 0 1 {A2249R:G -> A2248R:C: adjacent_3p downward } 0 2 {A2248R:C -> A2253R:G: pairing antiparallel cis one_hbond Ww/Ww } 0 3 {A2253R:G -> A2248R:C: pairing antiparallel cis one_hbond Ww/Ww } 0 4 {A2249R:G -> A2250R:G: adjacent_5p } 0 5 {A2250R:G -> A2249R:G: adjacent_3p } 0 6 {A2249R:G -> A2252R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A2252R:A -> A2249R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A2249R:G -> A2253R:G: outward } 0 9 {A2253R:G -> A2249R:G: outward } 0 10 {A2250R:G -> A2251R:G: adjacent_5p upward } 0 11 {A2251R:G -> A2250R:G: adjacent_3p downward } 0 12 {A2251R:G -> A2252R:A: adjacent_5p upward } 0 13 {A2252R:A -> A2251R:G: adjacent_3p downward } 0 14 {A2252R:A -> A2253R:G: adjacent_5p upward } 0 15 {A2253R:G -> A2252R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 A2301R:A 0 1 A2302R:A 0 2 A2303R:A 0 3 A2304R:G 0 4 A2305R:A 0 5 A2306R:U 0 [Edges] 0 {A2301R:A -> A2302R:A: adjacent_5p } 0 1 {A2302R:A -> A2301R:A: adjacent_3p } 0 2 {A2301R:A -> A2306R:U: pairing parallel trans XXI Ww/Ws } 0 3 {A2306R:U -> A2301R:A: pairing parallel trans XXI Ws/Ww } 0 4 {A2302R:A -> A2303R:A: adjacent_5p } 0 5 {A2303R:A -> A2302R:A: adjacent_3p } 0 6 {A2303R:A -> A2304R:G: adjacent_5p upward } 0 7 {A2304R:G -> A2303R:A: adjacent_3p downward } 0 8 {A2304R:G -> A2305R:A: adjacent_5p upward } 0 9 {A2305R:A -> A2304R:G: adjacent_3p downward } 0 10 {A2305R:A -> A2306R:U: adjacent_5p upward } 0 11 {A2306R:U -> A2305R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A2365R:G 0 1 A2366R:C 0 2 A2367R:A 0 3 A2368R:A 0 4 A2369R:A 0 5 A2370R:A 0 [Edges] 0 {A2365R:G -> A2366R:C: adjacent_5p upward } 0 1 {A2366R:C -> A2365R:G: adjacent_3p downward } 0 2 {A2365R:G -> A2370R:A: pairing parallel trans 57 Ss/Ss } 0 3 {A2370R:A -> A2365R:G: pairing parallel trans 57 Ss/Ss } 0 4 {A2366R:C -> A2367R:A: adjacent_5p } 0 5 {A2367R:A -> A2366R:C: adjacent_3p } 0 6 {A2367R:A -> A2368R:A: adjacent_5p } 0 7 {A2368R:A -> A2367R:A: adjacent_3p } 0 8 {A2367R:A -> A2369R:A: outward } 0 9 {A2369R:A -> A2367R:A: outward } 0 10 {A2368R:A -> A2369R:A: adjacent_5p } 0 11 {A2369R:A -> A2368R:A: adjacent_3p } 0 12 {A2369R:A -> A2370R:A: adjacent_5p } 0 13 {A2370R:A -> A2369R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 8 . 3 . . 7 . 10 . 4 . . 9 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 A2411R:C 0 1 A2412R:G 0 2 A2413R:A 0 3 A2414R:A 0 4 A2415R:A 0 5 A2416R:G 0 [Edges] 0 {A2411R:C -> A2412R:G: adjacent_5p upward } 0 1 {A2412R:G -> A2411R:C: adjacent_3p downward } 0 2 {A2411R:C -> A2416R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A2416R:G -> A2411R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A2412R:G -> A2413R:A: adjacent_5p } 0 5 {A2413R:A -> A2412R:G: adjacent_3p } 0 6 {A2412R:G -> A2415R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A2415R:A -> A2412R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A2412R:G -> A2416R:G: outward } 0 9 {A2416R:G -> A2412R:G: outward } 0 10 {A2413R:A -> A2414R:A: adjacent_5p upward } 0 11 {A2414R:A -> A2413R:A: adjacent_3p downward } 0 12 {A2414R:A -> A2415R:A: adjacent_5p upward } 0 13 {A2415R:A -> A2414R:A: adjacent_3p downward } 0 14 {A2415R:A -> A2416R:G: adjacent_5p } 0 15 {A2416R:G -> A2415R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 A2611R:G 0 1 A2612R:A 0 2 A2613R:G 0 3 A2614R:C 0 4 A2615R:U 0 5 A2616R:G 0 [Edges] 0 {A2611R:G -> A2612R:A: adjacent_5p } 0 1 {A2612R:A -> A2611R:G: adjacent_3p } 0 2 {A2611R:G -> A2616R:G: pairing antiparallel trans Hh/Ww } 0 3 {A2616R:G -> A2611R:G: pairing antiparallel trans Ww/Hh } 0 4 {A2612R:A -> A2613R:G: adjacent_5p } 0 5 {A2613R:G -> A2612R:A: adjacent_3p } 0 6 {A2613R:G -> A2614R:C: adjacent_5p upward } 0 7 {A2614R:C -> A2613R:G: adjacent_3p downward } 0 8 {A2614R:C -> A2615R:U: adjacent_5p upward } 0 9 {A2615R:U -> A2614R:C: adjacent_3p downward } 0 10 {A2615R:U -> A2616R:G: adjacent_5p upward } 0 11 {A2616R:G -> A2615R:U: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A5R:G 0 1 A6R:U 0 2 A7R:G 0 3 A8R:A 0 4 A9R:A 0 5 A10R:A 0 [Edges] 0 {A5R:G -> A6R:U: adjacent_5p upward } 0 1 {A6R:U -> A5R:G: adjacent_3p downward } 0 2 {A5R:G -> A10R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 3 {A10R:A -> A5R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 4 {A6R:U -> A7R:G: adjacent_5p } 0 5 {A7R:G -> A6R:U: adjacent_3p } 0 6 {A7R:G -> A8R:A: adjacent_5p upward } 0 7 {A8R:A -> A7R:G: adjacent_3p downward } 0 8 {A8R:A -> A9R:A: adjacent_5p upward } 0 9 {A9R:A -> A8R:A: adjacent_3p downward } 0 10 {A9R:A -> A10R:A: adjacent_5p upward } 0 11 {A10R:A -> A9R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 16R:C 0 1 17R:U 0 2 18R:U 0 3 19R:C 0 4 20R:G 0 5 21R:G 0 [Edges] 0 {16R:C -> 17R:U: adjacent_5p upward } 0 1 {17R:U -> 16R:C: adjacent_3p downward } 0 2 {16R:C -> 21R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {21R:G -> 16R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {17R:U -> 18R:U: adjacent_5p } 0 5 {18R:U -> 17R:U: adjacent_3p } 0 6 {18R:U -> 19R:C: adjacent_5p } 0 7 {19R:C -> 18R:U: adjacent_3p } 0 8 {19R:C -> 20R:G: adjacent_5p } 0 9 {20R:G -> 19R:C: adjacent_3p } 0 10 {20R:G -> 21R:G: adjacent_5p outward } 0 11 {21R:G -> 20R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A11R:C 0 1 A12R:U 0 2 A13R:U 0 3 A14R:C 0 4 A15R:G 0 5 A16R:G 0 [Edges] 0 {A11R:C -> A12R:U: adjacent_5p upward } 0 1 {A12R:U -> A11R:C: adjacent_3p downward } 0 2 {A11R:C -> A16R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A16R:G -> A11R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A12R:U -> A13R:U: adjacent_5p } 0 5 {A13R:U -> A12R:U: adjacent_3p } 0 6 {A13R:U -> A14R:C: adjacent_5p } 0 7 {A14R:C -> A13R:U: adjacent_3p } 0 8 {A14R:C -> A15R:G: adjacent_5p } 0 9 {A15R:G -> A14R:C: adjacent_3p } 0 10 {A15R:G -> A16R:G: adjacent_5p outward } 0 11 {A16R:G -> A15R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 D590R:C 0 1 D591R:G 0 2 D592R:A 0 3 D593R:A 0 4 D594R:A 0 5 D649R:G 0 [Edges] 0 {D590R:C -> D591R:G: adjacent_5p upward } 0 1 {D591R:G -> D590R:C: adjacent_3p downward } 0 2 {D590R:C -> D649R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {D649R:G -> D590R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {D591R:G -> D592R:A: adjacent_5p } 0 5 {D592R:A -> D591R:G: adjacent_3p } 0 6 {D591R:G -> D594R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {D594R:A -> D591R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {D591R:G -> D649R:G: outward } 0 9 {D649R:G -> D591R:G: outward } 0 10 {D592R:A -> D593R:A: adjacent_5p upward } 0 11 {D593R:A -> D592R:A: adjacent_3p downward } 0 12 {D593R:A -> D594R:A: adjacent_5p upward } 0 13 {D594R:A -> D593R:A: adjacent_3p downward } 0 14 {D594R:A -> D649R:G: adjacent_5p upward } 0 15 {D649R:G -> D594R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 E726R:C 0 1 E727R:G 0 2 E728R:A 0 3 E729R:A 0 4 E730R:G 0 5 E731R:G 0 [Edges] 0 {E726R:C -> E727R:G: adjacent_5p upward } 0 1 {E727R:G -> E726R:C: adjacent_3p downward } 0 2 {E726R:C -> E731R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {E731R:G -> E726R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {E727R:G -> E728R:A: adjacent_5p } 0 5 {E728R:A -> E727R:G: adjacent_3p } 0 6 {E727R:G -> E730R:G: pairing antiparallel trans one_hbond 108 Sw/Hh } 0 7 {E730R:G -> E727R:G: pairing antiparallel trans one_hbond 108 Hh/Sw } 0 8 {E727R:G -> E731R:G: outward } 0 9 {E731R:G -> E727R:G: outward } 0 10 {E728R:A -> E729R:A: adjacent_5p upward } 0 11 {E729R:A -> E728R:A: adjacent_3p downward } 0 12 {E729R:A -> E730R:G: adjacent_5p upward } 0 13 {E730R:G -> E729R:A: adjacent_3p downward } 0 14 {E730R:G -> E731R:G: adjacent_5p } 0 15 {E731R:G -> E730R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 I590R:C 0 1 I591R:G 0 2 I592R:A 0 3 I593R:A 0 4 I594R:A 0 5 I649R:G 0 [Edges] 0 {I590R:C -> I591R:G: adjacent_5p upward } 0 1 {I591R:G -> I590R:C: adjacent_3p downward } 0 2 {I590R:C -> I649R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {I649R:G -> I590R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {I591R:G -> I592R:A: adjacent_5p } 0 5 {I592R:A -> I591R:G: adjacent_3p } 0 6 {I591R:G -> I649R:G: outward } 0 7 {I649R:G -> I591R:G: outward } 0 8 {I592R:A -> I593R:A: adjacent_5p upward } 0 9 {I593R:A -> I592R:A: adjacent_3p downward } 0 10 {I593R:A -> I594R:A: adjacent_5p upward } 0 11 {I594R:A -> I593R:A: adjacent_3p downward } 0 12 {I594R:A -> I649R:G: adjacent_5p upward } 0 13 {I649R:G -> I594R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . [GraphModel] [Vertices] 0 J726R:C 0 1 J727R:G 0 2 J728R:A 0 3 J729R:A 0 4 J730R:G 0 5 J731R:G 0 [Edges] 0 {J726R:C -> J727R:G: adjacent_5p } 0 1 {J727R:G -> J726R:C: adjacent_3p } 0 2 {J726R:C -> J731R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {J731R:G -> J726R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {J727R:G -> J728R:A: adjacent_5p } 0 5 {J728R:A -> J727R:G: adjacent_3p } 0 6 {J727R:G -> J730R:G: pairing antiparallel trans one_hbond 108 Sw/Hh } 0 7 {J730R:G -> J727R:G: pairing antiparallel trans one_hbond 108 Hh/Sw } 0 8 {J727R:G -> J731R:G: outward } 0 9 {J731R:G -> J727R:G: outward } 0 10 {J728R:A -> J729R:A: adjacent_5p upward } 0 11 {J729R:A -> J728R:A: adjacent_3p downward } 0 12 {J729R:A -> J730R:G: adjacent_5p upward } 0 13 {J730R:G -> J729R:A: adjacent_3p downward } 0 14 {J730R:G -> J731R:G: adjacent_5p } 0 15 {J731R:G -> J730R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A54R:C 0 1 A60R:U 0 2 A61R:U 0 3 A62R:C 0 4 A63R:G 0 5 A64R:G 0 [Edges] 0 {A54R:C -> A60R:U: adjacent_5p upward } 0 1 {A60R:U -> A54R:C: adjacent_3p downward } 0 2 {A54R:C -> A64R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A64R:G -> A54R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A60R:U -> A61R:U: adjacent_5p } 0 5 {A61R:U -> A60R:U: adjacent_3p } 0 6 {A61R:U -> A62R:C: adjacent_5p } 0 7 {A62R:C -> A61R:U: adjacent_3p } 0 8 {A61R:U -> A63R:G: pairing antiparallel cis one_hbond Hh/Hw } 0 9 {A63R:G -> A61R:U: pairing antiparallel cis one_hbond Hw/Hh } 0 10 {A62R:C -> A63R:G: adjacent_5p } 0 11 {A63R:G -> A62R:C: adjacent_3p } 0 12 {A63R:G -> A64R:G: adjacent_5p outward } 0 13 {A64R:G -> A63R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 8 . 3 . . 7 . 10 . 4 . . 9 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 R8R:G 0 1 R9R:A 0 2 R10R:U 0 3 R11R:U 0 4 R12R:A 0 5 R13R:C 0 [Edges] 0 {R8R:G -> R9R:A: adjacent_5p upward } 0 1 {R9R:A -> R8R:G: adjacent_3p downward } 0 2 {R8R:G -> R13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {R13R:C -> R8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {R9R:A -> R10R:U: adjacent_5p } 0 5 {R10R:U -> R9R:A: adjacent_3p } 0 6 {R9R:A -> R11R:U: upward } 0 7 {R11R:U -> R9R:A: downward } 0 8 {R10R:U -> R11R:U: adjacent_5p } 0 9 {R11R:U -> R10R:U: adjacent_3p } 0 10 {R11R:U -> R12R:A: adjacent_5p } 0 11 {R12R:A -> R11R:U: adjacent_3p } 0 12 {R12R:A -> R13R:C: adjacent_5p } 0 13 {R13R:C -> R12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 S8R:G 0 1 S9R:A 0 2 S10R:U 0 3 S11R:U 0 4 S12R:A 0 5 S13R:C 0 [Edges] 0 {S8R:G -> S9R:A: adjacent_5p upward } 0 1 {S9R:A -> S8R:G: adjacent_3p downward } 0 2 {S8R:G -> S13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {S13R:C -> S8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {S9R:A -> S10R:U: adjacent_5p } 0 5 {S10R:U -> S9R:A: adjacent_3p } 0 6 {S9R:A -> S11R:U: upward } 0 7 {S11R:U -> S9R:A: downward } 0 8 {S10R:U -> S11R:U: adjacent_5p } 0 9 {S11R:U -> S10R:U: adjacent_3p } 0 10 {S11R:U -> S12R:A: adjacent_5p } 0 11 {S12R:A -> S11R:U: adjacent_3p } 0 12 {S12R:A -> S13R:C: adjacent_5p } 0 13 {S13R:C -> S12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 C143R:G 0 1 C144R:U 0 2 C145R:A 0 3 C146R:A 0 4 C147R:U 0 5 C148R:A 0 [Edges] 0 {C143R:G -> C144R:U: adjacent_5p upward } 0 1 {C144R:U -> C143R:G: adjacent_3p downward } 0 2 {C143R:G -> C148R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {C148R:A -> C143R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {C144R:U -> C145R:A: adjacent_5p } 0 5 {C145R:A -> C144R:U: adjacent_3p } 0 6 {C145R:A -> C146R:A: adjacent_5p upward } 0 7 {C146R:A -> C145R:A: adjacent_3p downward } 0 8 {C146R:A -> C147R:U: adjacent_5p upward } 0 9 {C147R:U -> C146R:A: adjacent_3p downward } 0 10 {C147R:U -> C148R:A: adjacent_5p upward } 0 11 {C148R:A -> C147R:U: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 D343R:G 0 1 D344R:U 0 2 D345R:A 0 3 D346R:A 0 4 D347R:U 0 5 D348R:A 0 [Edges] 0 {D343R:G -> D344R:U: adjacent_5p upward } 0 1 {D344R:U -> D343R:G: adjacent_3p downward } 0 2 {D343R:G -> D348R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {D348R:A -> D343R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {D344R:U -> D345R:A: adjacent_5p } 0 5 {D345R:A -> D344R:U: adjacent_3p } 0 6 {D345R:A -> D346R:A: adjacent_5p upward } 0 7 {D346R:A -> D345R:A: adjacent_3p downward } 0 8 {D346R:A -> D347R:U: adjacent_5p upward } 0 9 {D347R:U -> D346R:A: adjacent_3p downward } 0 10 {D347R:U -> D348R:A: adjacent_5p upward } 0 11 {D348R:A -> D347R:U: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A104R:C 0 1 A21.LR:G 0 2 A22.LR:A 0 3 A23.LR:A 0 4 A24.LR:A 0 5 A114R:G 0 [Edges] 0 {A21.LR:G -> A22.LR:A: adjacent_5p } 0 1 {A22.LR:A -> A21.LR:G: adjacent_3p } 0 2 {A21.LR:G -> A24.LR:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A24.LR:A -> A21.LR:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A21.LR:G -> A104R:C: adjacent_3p downward } 0 5 {A104R:C -> A21.LR:G: adjacent_5p upward } 0 6 {A21.LR:G -> A114R:G: outward } 0 7 {A114R:G -> A21.LR:G: outward } 0 8 {A22.LR:A -> A23.LR:A: adjacent_5p upward } 0 9 {A23.LR:A -> A22.LR:A: adjacent_3p downward } 0 10 {A23.LR:A -> A24.LR:A: adjacent_5p upward } 0 11 {A24.LR:A -> A23.LR:A: adjacent_3p downward } 0 12 {A24.LR:A -> A114R:G: adjacent_5p upward } 0 13 {A114R:G -> A24.LR:A: adjacent_3p downward } 0 14 {A104R:C -> A114R:G: pairing antiparallel cis XIX Ww/Ww } 0 15 {A114R:G -> A104R:C: pairing antiparallel cis XIX Ww/Ww } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 5 . . . 14 1 4 . 0 . 2 6 2 . 1 . 8 . . 3 . . 9 . 10 . 4 . 3 . 11 . 12 5 15 7 . . 13 . [GraphModel] [Vertices] 0 C104R:C 0 1 C21.LR:G 0 2 C22.LR:A 0 3 C23.LR:A 0 4 C24.LR:A 0 5 C114R:G 0 [Edges] 0 {C21.LR:G -> C22.LR:A: adjacent_5p } 0 1 {C22.LR:A -> C21.LR:G: adjacent_3p } 0 2 {C21.LR:G -> C24.LR:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {C24.LR:A -> C21.LR:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {C21.LR:G -> C104R:C: adjacent_3p downward } 0 5 {C104R:C -> C21.LR:G: adjacent_5p upward } 0 6 {C21.LR:G -> C114R:G: outward } 0 7 {C114R:G -> C21.LR:G: outward } 0 8 {C22.LR:A -> C23.LR:A: adjacent_5p upward } 0 9 {C23.LR:A -> C22.LR:A: adjacent_3p downward } 0 10 {C23.LR:A -> C24.LR:A: adjacent_5p upward } 0 11 {C24.LR:A -> C23.LR:A: adjacent_3p downward } 0 12 {C24.LR:A -> C114R:G: adjacent_5p upward } 0 13 {C114R:G -> C24.LR:A: adjacent_3p downward } 0 14 {C104R:C -> C114R:G: pairing antiparallel cis XIX Ww/Ww } 0 15 {C114R:G -> C104R:C: pairing antiparallel cis XIX Ww/Ww } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 5 . . . 14 1 4 . 0 . 2 6 2 . 1 . 8 . . 3 . . 9 . 10 . 4 . 3 . 11 . 12 5 15 7 . . 13 . [GraphModel] [Vertices] 0 E104R:C 0 1 E21.LR:G 0 2 E22.LR:A 0 3 E23.LR:A 0 4 E24.LR:A 0 5 E114R:G 0 [Edges] 0 {E21.LR:G -> E22.LR:A: adjacent_5p } 0 1 {E22.LR:A -> E21.LR:G: adjacent_3p } 0 2 {E21.LR:G -> E24.LR:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {E24.LR:A -> E21.LR:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {E21.LR:G -> E104R:C: adjacent_3p downward } 0 5 {E104R:C -> E21.LR:G: adjacent_5p upward } 0 6 {E21.LR:G -> E114R:G: outward } 0 7 {E114R:G -> E21.LR:G: outward } 0 8 {E22.LR:A -> E23.LR:A: adjacent_5p upward } 0 9 {E23.LR:A -> E22.LR:A: adjacent_3p downward } 0 10 {E23.LR:A -> E24.LR:A: adjacent_5p upward } 0 11 {E24.LR:A -> E23.LR:A: adjacent_3p downward } 0 12 {E24.LR:A -> E114R:G: adjacent_5p } 0 13 {E114R:G -> E24.LR:A: adjacent_3p } 0 14 {E104R:C -> E114R:G: pairing antiparallel cis XIX Ww/Ww } 0 15 {E114R:G -> E104R:C: pairing antiparallel cis XIX Ww/Ww } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 5 . . . 14 1 4 . 0 . 2 6 2 . 1 . 8 . . 3 . . 9 . 10 . 4 . 3 . 11 . 12 5 15 7 . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A4R:U 0 1 A5R:U 0 2 A6R:A 0 3 A7R:A 0 4 A8R:C 0 5 A9R:U 0 [Edges] 0 {A4R:U -> A5R:U: adjacent_5p } 0 1 {A5R:U -> A4R:U: adjacent_3p } 0 2 {A4R:U -> A9R:U: pairing antiparallel cis XVI Ws/Ww } 0 3 {A9R:U -> A4R:U: pairing antiparallel cis XVI Ww/Ws } 0 4 {A5R:U -> A6R:A: adjacent_5p } 0 5 {A6R:A -> A5R:U: adjacent_3p } 0 6 {A6R:A -> A7R:A: adjacent_5p upward } 0 7 {A7R:A -> A6R:A: adjacent_3p downward } 0 8 {A7R:A -> A8R:C: adjacent_5p } 0 9 {A8R:C -> A7R:A: adjacent_3p } 0 10 {A8R:C -> A9R:U: adjacent_5p } 0 11 {A9R:U -> A8R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A4R:U 0 1 A5R:U 0 2 A6R:A 0 3 A7R:A 0 4 A8R:G 0 5 A9R:U 0 [Edges] 0 {A4R:U -> A5R:U: adjacent_5p } 0 1 {A5R:U -> A4R:U: adjacent_3p } 0 2 {A4R:U -> A9R:U: pairing antiparallel cis XVI Ws/Ww } 0 3 {A9R:U -> A4R:U: pairing antiparallel cis XVI Ww/Ws } 0 4 {A5R:U -> A6R:A: adjacent_5p } 0 5 {A6R:A -> A5R:U: adjacent_3p } 0 6 {A6R:A -> A7R:A: adjacent_5p upward } 0 7 {A7R:A -> A6R:A: adjacent_3p downward } 0 8 {A7R:A -> A8R:G: adjacent_5p } 0 9 {A8R:G -> A7R:A: adjacent_3p } 0 10 {A8R:G -> A9R:U: adjacent_5p } 0 11 {A9R:U -> A8R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A4R:U 0 1 A5R:U 0 2 A6R:A 0 3 A7R:A 0 4 A8R:U 0 5 A9R:U 0 [Edges] 0 {A4R:U -> A5R:U: adjacent_5p } 0 1 {A5R:U -> A4R:U: adjacent_3p } 0 2 {A4R:U -> A9R:U: pairing antiparallel cis XVI Ws/Ww } 0 3 {A9R:U -> A4R:U: pairing antiparallel cis XVI Ww/Ws } 0 4 {A5R:U -> A6R:A: adjacent_5p } 0 5 {A6R:A -> A5R:U: adjacent_3p } 0 6 {A5R:U -> A9R:U: outward } 0 7 {A9R:U -> A5R:U: outward } 0 8 {A6R:A -> A7R:A: adjacent_5p upward } 0 9 {A7R:A -> A6R:A: adjacent_3p downward } 0 10 {A7R:A -> A8R:U: adjacent_5p } 0 11 {A8R:U -> A7R:A: adjacent_3p } 0 12 {A8R:U -> A9R:U: adjacent_5p } 0 13 {A9R:U -> A8R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A4R:U 0 1 A5R:U 0 2 A6R:A 0 3 A7R:A 0 4 A8R:A 0 5 A9R:U 0 [Edges] 0 {A4R:U -> A5R:U: adjacent_5p } 0 1 {A5R:U -> A4R:U: adjacent_3p } 0 2 {A4R:U -> A9R:U: pairing antiparallel cis XVI Ws/Ww } 0 3 {A9R:U -> A4R:U: pairing antiparallel cis XVI Ww/Ws } 0 4 {A5R:U -> A6R:A: adjacent_5p } 0 5 {A6R:A -> A5R:U: adjacent_3p } 0 6 {A5R:U -> A9R:U: outward } 0 7 {A9R:U -> A5R:U: outward } 0 8 {A6R:A -> A7R:A: adjacent_5p upward } 0 9 {A7R:A -> A6R:A: adjacent_3p downward } 0 10 {A7R:A -> A8R:A: adjacent_5p } 0 11 {A8R:A -> A7R:A: adjacent_3p } 0 12 {A8R:A -> A9R:U: adjacent_5p } 0 13 {A9R:U -> A8R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A4R:U 0 1 A5R:C 0 2 A6R:A 0 3 A7R:A 0 4 A8R:U 0 5 A9R:U 0 [Edges] 0 {A4R:U -> A5R:C: adjacent_5p } 0 1 {A5R:C -> A4R:U: adjacent_3p } 0 2 {A4R:U -> A9R:U: pairing antiparallel cis XVI Ws/Ww } 0 3 {A9R:U -> A4R:U: pairing antiparallel cis XVI Ww/Ws } 0 4 {A5R:C -> A6R:A: adjacent_5p } 0 5 {A6R:A -> A5R:C: adjacent_3p } 0 6 {A6R:A -> A7R:A: adjacent_5p upward } 0 7 {A7R:A -> A6R:A: adjacent_3p downward } 0 8 {A7R:A -> A8R:U: adjacent_5p } 0 9 {A8R:U -> A7R:A: adjacent_3p } 0 10 {A8R:U -> A9R:U: adjacent_5p } 0 11 {A9R:U -> A8R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 C16R:C 0 1 C17R:U 0 2 C18R:U 0 3 C19R:C 0 4 C20R:G 0 5 C21R:G 0 [Edges] 0 {C16R:C -> C17R:U: adjacent_5p upward } 0 1 {C17R:U -> C16R:C: adjacent_3p downward } 0 2 {C16R:C -> C21R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {C21R:G -> C16R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {C17R:U -> C18R:U: adjacent_5p } 0 5 {C18R:U -> C17R:U: adjacent_3p } 0 6 {C17R:U -> C19R:C: upward } 0 7 {C19R:C -> C17R:U: downward } 0 8 {C18R:U -> C19R:C: adjacent_5p } 0 9 {C19R:C -> C18R:U: adjacent_3p } 0 10 {C19R:C -> C20R:G: adjacent_5p } 0 11 {C20R:G -> C19R:C: adjacent_3p } 0 12 {C20R:G -> C21R:G: adjacent_5p outward } 0 13 {C21R:G -> C20R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 D16R:C 0 1 D17R:U 0 2 D18R:U 0 3 D19R:C 0 4 D20R:G 0 5 D21R:G 0 [Edges] 0 {D16R:C -> D17R:U: adjacent_5p upward } 0 1 {D17R:U -> D16R:C: adjacent_3p downward } 0 2 {D16R:C -> D21R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {D21R:G -> D16R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {D17R:U -> D18R:U: adjacent_5p } 0 5 {D18R:U -> D17R:U: adjacent_3p } 0 6 {D17R:U -> D19R:C: upward } 0 7 {D19R:C -> D17R:U: downward } 0 8 {D18R:U -> D19R:C: adjacent_5p } 0 9 {D19R:C -> D18R:U: adjacent_3p } 0 10 {D19R:C -> D20R:G: adjacent_5p } 0 11 {D20R:G -> D19R:C: adjacent_3p } 0 12 {D20R:G -> D21R:G: adjacent_5p outward } 0 13 {D21R:G -> D20R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A14R:C 0 1 A15R:G 0 2 A16R:C 0 3 A17R:A 0 4 A18R:A 0 5 A19R:G 0 [Edges] 0 {A14R:C -> A15R:G: adjacent_5p } 0 1 {A15R:G -> A14R:C: adjacent_3p } 0 2 {A14R:C -> A19R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A19R:G -> A14R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A15R:G -> A16R:C: adjacent_5p } 0 5 {A16R:C -> A15R:G: adjacent_3p } 0 6 {A15R:G -> A18R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 7 {A18R:A -> A15R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 8 {A16R:C -> A17R:A: adjacent_5p } 0 9 {A17R:A -> A16R:C: adjacent_3p } 0 10 {A17R:A -> A18R:A: adjacent_5p upward } 0 11 {A18R:A -> A17R:A: adjacent_3p downward } 0 12 {A18R:A -> A19R:G: adjacent_5p } 0 13 {A19R:G -> A18R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A3R:G 0 1 A4R:C 0 2 A5R:G 0 3 A6R:U 0 4 A7R:G 0 5 A8R:C 0 [Edges] 0 {A3R:G -> A4R:C: adjacent_5p } 0 1 {A4R:C -> A3R:G: adjacent_3p } 0 2 {A3R:G -> A8R:C: pairing antiparallel cis one_hbond Ws/Ww } 0 3 {A8R:C -> A3R:G: pairing antiparallel cis one_hbond Ww/Ws } 0 4 {A4R:C -> A5R:G: adjacent_5p } 0 5 {A5R:G -> A4R:C: adjacent_3p } 0 6 {A4R:C -> A7R:G: pairing antiparallel cis one_hbond Hw/Hw } 0 7 {A7R:G -> A4R:C: pairing antiparallel cis one_hbond Hw/Hw } 0 8 {A5R:G -> A6R:U: adjacent_5p upward } 0 9 {A6R:U -> A5R:G: adjacent_3p downward } 0 10 {A6R:U -> A7R:G: adjacent_5p upward } 0 11 {A7R:G -> A6R:U: adjacent_3p downward } 0 12 {A7R:G -> A8R:C: adjacent_5p upward } 0 13 {A8R:C -> A7R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A9R:U 0 1 A10R:C 0 2 A11R:C 0 3 A12R:C 0 4 A13R:G 0 5 A14R:A 0 [Edges] 0 {A9R:U -> A10R:C: adjacent_5p } 0 1 {A10R:C -> A9R:U: adjacent_3p } 0 2 {A9R:U -> A14R:A: pairing antiparallel cis one_hbond Ww/Ww } 0 3 {A14R:A -> A9R:U: pairing antiparallel cis one_hbond Ww/Ww } 0 4 {A10R:C -> A11R:C: adjacent_5p } 0 5 {A11R:C -> A10R:C: adjacent_3p } 0 6 {A11R:C -> A12R:C: adjacent_5p } 0 7 {A12R:C -> A11R:C: adjacent_3p } 0 8 {A12R:C -> A13R:G: adjacent_5p } 0 9 {A13R:G -> A12R:C: adjacent_3p } 0 10 {A13R:G -> A14R:A: adjacent_5p } 0 11 {A14R:A -> A13R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 7R:C 0 1 8R:U 0 2 9R:U 0 3 10R:C 0 4 11R:G 0 5 12R:G 0 [Edges] 0 {7R:C -> 8R:U: adjacent_5p upward } 0 1 {8R:U -> 7R:C: adjacent_3p downward } 0 2 {7R:C -> 12R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {12R:G -> 7R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {8R:U -> 9R:U: adjacent_5p } 0 5 {9R:U -> 8R:U: adjacent_3p } 0 6 {9R:U -> 10R:C: adjacent_5p } 0 7 {10R:C -> 9R:U: adjacent_3p } 0 8 {10R:C -> 11R:G: adjacent_5p } 0 9 {11R:G -> 10R:C: adjacent_3p } 0 10 {11R:G -> 12R:G: adjacent_5p outward } 0 11 {12R:G -> 11R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 D13R:C 0 1 D14R:G 0 2 D15R:A 0 3 D16R:G 0 4 D17R:A 0 5 D18R:G 0 [Edges] 0 {D13R:C -> D14R:G: adjacent_5p } 0 1 {D14R:G -> D13R:C: adjacent_3p } 0 2 {D13R:C -> D18R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {D18R:G -> D13R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {D14R:G -> D15R:A: adjacent_5p upward } 0 5 {D15R:A -> D14R:G: adjacent_3p downward } 0 6 {D14R:G -> D18R:G: outward } 0 7 {D18R:G -> D14R:G: outward } 0 8 {D15R:A -> D16R:G: adjacent_5p } 0 9 {D16R:G -> D15R:A: adjacent_3p } 0 10 {D16R:G -> D17R:A: adjacent_5p } 0 11 {D17R:A -> D16R:G: adjacent_3p } 0 12 {D17R:A -> D18R:G: adjacent_5p } 0 13 {D18R:G -> D17R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . MOLECULE: [GraphModel] [Vertices] 0 C13R:C 0 1 C14R:G 0 2 C15R:A 0 3 C16R:G 0 4 C17R:A 0 5 C18R:G 0 [Edges] 0 {C13R:C -> C14R:G: adjacent_5p upward } 0 1 {C14R:G -> C13R:C: adjacent_3p downward } 0 2 {C13R:C -> C18R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {C18R:G -> C13R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {C14R:G -> C15R:A: adjacent_5p upward } 0 5 {C15R:A -> C14R:G: adjacent_3p downward } 0 6 {C14R:G -> C18R:G: outward } 0 7 {C18R:G -> C14R:G: outward } 0 8 {C15R:A -> C16R:G: adjacent_5p } 0 9 {C16R:G -> C15R:A: adjacent_3p } 0 10 {C16R:G -> C17R:A: adjacent_5p } 0 11 {C17R:A -> C16R:G: adjacent_3p } 0 12 {C17R:A -> C18R:G: adjacent_5p } 0 13 {C18R:G -> C17R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . [GraphModel] [Vertices] 0 D13R:C 0 1 D14R:G 0 2 D15R:A 0 3 D16R:G 0 4 D17R:A 0 5 D18R:G 0 [Edges] 0 {D13R:C -> D14R:G: adjacent_5p upward } 0 1 {D14R:G -> D13R:C: adjacent_3p downward } 0 2 {D13R:C -> D18R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {D18R:G -> D13R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {D14R:G -> D15R:A: adjacent_5p upward } 0 5 {D15R:A -> D14R:G: adjacent_3p downward } 0 6 {D14R:G -> D18R:G: outward } 0 7 {D18R:G -> D14R:G: outward } 0 8 {D15R:A -> D16R:G: adjacent_5p } 0 9 {D16R:G -> D15R:A: adjacent_3p } 0 10 {D16R:G -> D17R:A: adjacent_5p upward } 0 11 {D17R:A -> D16R:G: adjacent_3p downward } 0 12 {D17R:A -> D18R:G: adjacent_5p } 0 13 {D18R:G -> D17R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . MOLECULE: [GraphModel] [Vertices] 0 B146R:G 0 1 B147R:G 0 2 B148R:G 0 3 B149R:A 0 4 B150R:G 0 5 B151R:C 0 [Edges] 0 {B146R:G -> B147R:G: adjacent_5p upward } 0 1 {B147R:G -> B146R:G: adjacent_3p downward } 0 2 {B146R:G -> B151R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {B151R:C -> B146R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {B147R:G -> B148R:G: adjacent_5p } 0 5 {B148R:G -> B147R:G: adjacent_3p } 0 6 {B148R:G -> B149R:A: adjacent_5p upward } 0 7 {B149R:A -> B148R:G: adjacent_3p downward } 0 8 {B149R:A -> B150R:G: adjacent_5p upward } 0 9 {B150R:G -> B149R:A: adjacent_3p downward } 0 10 {B150R:G -> B151R:C: adjacent_5p } 0 11 {B151R:C -> B150R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A14R:C 0 1 A15R:U 0 2 A16R:U 0 3 A17R:C 0 4 A18R:G 0 5 A19R:G 0 [Edges] 0 {A14R:C -> A15R:U: adjacent_5p upward } 0 1 {A15R:U -> A14R:C: adjacent_3p downward } 0 2 {A14R:C -> A19R:G: pairing antiparallel cis Ww/Ww } 0 3 {A19R:G -> A14R:C: pairing antiparallel cis Ww/Ww } 0 4 {A15R:U -> A16R:U: adjacent_5p } 0 5 {A16R:U -> A15R:U: adjacent_3p } 0 6 {A15R:U -> A17R:C: upward } 0 7 {A17R:C -> A15R:U: downward } 0 8 {A16R:U -> A17R:C: adjacent_5p } 0 9 {A17R:C -> A16R:U: adjacent_3p } 0 10 {A17R:C -> A18R:G: adjacent_5p } 0 11 {A18R:G -> A17R:C: adjacent_3p } 0 12 {A18R:G -> A19R:G: adjacent_5p } 0 13 {A19R:G -> A18R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A6R:C 0 1 A7R:G 0 2 A8R:A 0 3 A9R:G 0 4 A10R:A 0 5 A11R:G 0 [Edges] 0 {A6R:C -> A7R:G: adjacent_5p upward } 0 1 {A7R:G -> A6R:C: adjacent_3p downward } 0 2 {A6R:C -> A11R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A11R:G -> A6R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A7R:G -> A8R:A: adjacent_5p } 0 5 {A8R:A -> A7R:G: adjacent_3p } 0 6 {A7R:G -> A10R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A10R:A -> A7R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A7R:G -> A11R:G: outward } 0 9 {A11R:G -> A7R:G: outward } 0 10 {A8R:A -> A9R:G: adjacent_5p upward } 0 11 {A9R:G -> A8R:A: adjacent_3p downward } 0 12 {A9R:G -> A10R:A: adjacent_5p upward } 0 13 {A10R:A -> A9R:G: adjacent_3p downward } 0 14 {A10R:A -> A11R:G: adjacent_5p } 0 15 {A11R:G -> A10R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A6R:U 0 1 A7R:U 0 2 A8R:U 0 3 A9R:U 0 4 A10R:C 0 5 A11R:A 0 [Edges] 0 {A6R:U -> A7R:U: adjacent_5p upward } 0 1 {A7R:U -> A6R:U: adjacent_3p downward } 0 2 {A6R:U -> A11R:A: pairing antiparallel cis one_hbond Wh/Wh } 0 3 {A11R:A -> A6R:U: pairing antiparallel cis one_hbond Wh/Wh } 0 4 {A7R:U -> A8R:U: adjacent_5p upward } 0 5 {A8R:U -> A7R:U: adjacent_3p downward } 0 6 {A7R:U -> A9R:U: pairing parallel cis one_hbond Ws/Hh } 0 7 {A9R:U -> A7R:U: pairing parallel cis one_hbond Hh/Ws } 0 8 {A8R:U -> A9R:U: adjacent_5p } 0 9 {A9R:U -> A8R:U: adjacent_3p } 0 10 {A9R:U -> A10R:C: adjacent_5p } 0 11 {A10R:C -> A9R:U: adjacent_3p } 0 12 {A9R:U -> A11R:A: outward } 0 13 {A11R:A -> A9R:U: outward } 0 14 {A10R:C -> A11R:A: adjacent_5p } 0 15 {A11R:A -> A10R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 12 4 . . . 11 . 14 5 3 . . 13 15 . MOLECULE: [GraphModel] [Vertices] 0 A8R:G 0 1 A9R:G 0 2 A10R:A 0 3 A11R:G 0 4 A12R:A 0 5 A13R:C 0 [Edges] 0 {A8R:G -> A9R:G: adjacent_5p } 0 1 {A9R:G -> A8R:G: adjacent_3p } 0 2 {A8R:G -> A13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A13R:C -> A8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A9R:G -> A10R:A: adjacent_5p } 0 5 {A10R:A -> A9R:G: adjacent_3p } 0 6 {A10R:A -> A11R:G: adjacent_5p upward } 0 7 {A11R:G -> A10R:A: adjacent_3p downward } 0 8 {A11R:G -> A12R:A: adjacent_5p upward } 0 9 {A12R:A -> A11R:G: adjacent_3p downward } 0 10 {A12R:A -> A13R:C: adjacent_5p upward } 0 11 {A13R:C -> A12R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A5R:C 0 1 A6R:U 0 2 A7R:U 0 3 A8R:C 0 4 A9R:G 0 5 A10R:G 0 [Edges] 0 {A5R:C -> A6R:U: adjacent_5p upward } 0 1 {A6R:U -> A5R:C: adjacent_3p downward } 0 2 {A5R:C -> A10R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A10R:G -> A5R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A6R:U -> A7R:U: adjacent_5p } 0 5 {A7R:U -> A6R:U: adjacent_3p } 0 6 {A7R:U -> A8R:C: adjacent_5p } 0 7 {A8R:C -> A7R:U: adjacent_3p } 0 8 {A8R:C -> A9R:G: adjacent_5p } 0 9 {A9R:G -> A8R:C: adjacent_3p } 0 10 {A9R:G -> A10R:G: adjacent_5p outward } 0 11 {A10R:G -> A9R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A15R:A 0 1 A16R:G 0 2 A17R:A 0 3 A18R:G 0 4 A19R:A 0 5 A20R:U 0 [Edges] 0 {A15R:A -> A16R:G: adjacent_5p upward } 0 1 {A16R:G -> A15R:A: adjacent_3p downward } 0 2 {A15R:A -> A20R:U: pairing antiparallel cis XX Ww/Ww } 0 3 {A20R:U -> A15R:A: pairing antiparallel cis XX Ww/Ww } 0 4 {A16R:G -> A17R:A: adjacent_5p } 0 5 {A17R:A -> A16R:G: adjacent_3p } 0 6 {A16R:G -> A19R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A19R:A -> A16R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A17R:A -> A18R:G: adjacent_5p upward } 0 9 {A18R:G -> A17R:A: adjacent_3p downward } 0 10 {A18R:G -> A19R:A: adjacent_5p upward } 0 11 {A19R:A -> A18R:G: adjacent_3p downward } 0 12 {A19R:A -> A20R:U: adjacent_5p } 0 13 {A20R:U -> A19R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A5R:C 0 1 A6R:A 0 2 A7R:G 0 3 A8R:A 0 4 A9R:A 0 5 A10R:G 0 [Edges] 0 {A5R:C -> A6R:A: adjacent_5p upward } 0 1 {A6R:A -> A5R:C: adjacent_3p downward } 0 2 {A5R:C -> A10R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A10R:G -> A5R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A6R:A -> A7R:G: adjacent_5p inward } 0 5 {A7R:G -> A6R:A: adjacent_3p inward } 0 6 {A6R:A -> A9R:A: pairing antiparallel trans 41 Ss/Hh } 0 7 {A9R:A -> A6R:A: pairing antiparallel trans 41 Hh/Ss } 0 8 {A7R:G -> A8R:A: adjacent_5p } 0 9 {A8R:A -> A7R:G: adjacent_3p } 0 10 {A8R:A -> A9R:A: adjacent_5p } 0 11 {A9R:A -> A8R:A: adjacent_3p } 0 12 {A9R:A -> A10R:G: adjacent_5p upward } 0 13 {A10R:G -> A9R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A5R:C 0 1 A6R:A 0 2 A7R:G 0 3 A8R:U 0 4 A9R:U 0 5 A10R:G 0 [Edges] 0 {A5R:C -> A6R:A: adjacent_5p upward } 0 1 {A6R:A -> A5R:C: adjacent_3p downward } 0 2 {A5R:C -> A10R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A10R:G -> A5R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A6R:A -> A7R:G: adjacent_5p } 0 5 {A7R:G -> A6R:A: adjacent_3p } 0 6 {A7R:G -> A8R:U: adjacent_5p } 0 7 {A8R:U -> A7R:G: adjacent_3p } 0 8 {A8R:U -> A9R:U: adjacent_5p } 0 9 {A9R:U -> A8R:U: adjacent_3p } 0 10 {A9R:U -> A10R:G: adjacent_5p } 0 11 {A10R:G -> A9R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A9R:G 0 1 A10R:A 0 2 A11R:G 0 3 A12R:U 0 4 A13R:C 0 5 A14R:C 0 [Edges] 0 {A9R:G -> A10R:A: adjacent_5p upward } 0 1 {A10R:A -> A9R:G: adjacent_3p downward } 0 2 {A9R:G -> A14R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A14R:C -> A9R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A10R:A -> A11R:G: adjacent_5p inward } 0 5 {A11R:G -> A10R:A: adjacent_3p inward } 0 6 {A10R:A -> A13R:C: pairing antiparallel trans one_hbond 72 Ss/Hw } 0 7 {A13R:C -> A10R:A: pairing antiparallel trans one_hbond 72 Hw/Ss } 0 8 {A11R:G -> A12R:U: adjacent_5p } 0 9 {A12R:U -> A11R:G: adjacent_3p } 0 10 {A12R:U -> A13R:C: adjacent_5p } 0 11 {A13R:C -> A12R:U: adjacent_3p } 0 12 {A13R:C -> A14R:C: adjacent_5p upward } 0 13 {A14R:C -> A13R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A9R:C 0 1 A10R:A 0 2 A11R:G 0 3 A12R:A 0 4 A13R:A 0 5 A14R:G 0 [Edges] 0 {A9R:C -> A10R:A: adjacent_5p upward } 0 1 {A10R:A -> A9R:C: adjacent_3p downward } 0 2 {A9R:C -> A14R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A14R:G -> A9R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A10R:A -> A11R:G: adjacent_5p inward } 0 5 {A11R:G -> A10R:A: adjacent_3p inward } 0 6 {A10R:A -> A13R:A: pairing antiparallel trans one_hbond 40 Ss/Wh } 0 7 {A13R:A -> A10R:A: pairing antiparallel trans one_hbond 40 Wh/Ss } 0 8 {A11R:G -> A12R:A: adjacent_5p } 0 9 {A12R:A -> A11R:G: adjacent_3p } 0 10 {A12R:A -> A13R:A: adjacent_5p upward } 0 11 {A13R:A -> A12R:A: adjacent_3p downward } 0 12 {A13R:A -> A14R:G: adjacent_5p upward } 0 13 {A14R:G -> A13R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A28R:C 0 1 A29R:G 0 2 A30R:A 0 3 A31R:A 0 4 A32R:A 0 5 A33R:G 0 [Edges] 0 {A28R:C -> A29R:G: adjacent_5p upward } 0 1 {A29R:G -> A28R:C: adjacent_3p downward } 0 2 {A28R:C -> A33R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A33R:G -> A28R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A29R:G -> A30R:A: adjacent_5p } 0 5 {A30R:A -> A29R:G: adjacent_3p } 0 6 {A30R:A -> A31R:A: adjacent_5p upward } 0 7 {A31R:A -> A30R:A: adjacent_3p downward } 0 8 {A31R:A -> A32R:A: adjacent_5p upward } 0 9 {A32R:A -> A31R:A: adjacent_3p downward } 0 10 {A32R:A -> A33R:G: adjacent_5p upward } 0 11 {A33R:G -> A32R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A10R:U 0 1 A11R:U 0 2 A12R:U 0 3 A13R:U 0 4 A14R:C 0 5 A15R:A 0 [Edges] 0 {A10R:U -> A11R:U: adjacent_5p } 0 1 {A11R:U -> A10R:U: adjacent_3p } 0 2 {A10R:U -> A15R:A: pairing antiparallel cis XX Ww/Ww } 0 3 {A15R:A -> A10R:U: pairing antiparallel cis XX Ww/Ww } 0 4 {A11R:U -> A12R:U: adjacent_5p } 0 5 {A12R:U -> A11R:U: adjacent_3p } 0 6 {A11R:U -> A13R:U: downward } 0 7 {A13R:U -> A11R:U: upward } 0 8 {A12R:U -> A13R:U: adjacent_5p } 0 9 {A13R:U -> A12R:U: adjacent_3p } 0 10 {A13R:U -> A14R:C: adjacent_5p } 0 11 {A14R:C -> A13R:U: adjacent_3p } 0 12 {A13R:U -> A15R:A: outward } 0 13 {A15R:A -> A13R:U: outward } 0 14 {A14R:C -> A15R:A: adjacent_5p } 0 15 {A15R:A -> A14R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 12 4 . . . 11 . 14 5 3 . . 13 15 . MOLECULE: [GraphModel] [Vertices] 0 A14R:C 0 1 A15R:U 0 2 A16R:U 0 3 A17R:C 0 4 A18R:G 0 5 A19R:G 0 [Edges] 0 {A14R:C -> A15R:U: adjacent_5p upward } 0 1 {A15R:U -> A14R:C: adjacent_3p downward } 0 2 {A14R:C -> A19R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A19R:G -> A14R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A15R:U -> A16R:U: adjacent_5p } 0 5 {A16R:U -> A15R:U: adjacent_3p } 0 6 {A15R:U -> A17R:C: upward } 0 7 {A17R:C -> A15R:U: downward } 0 8 {A15R:U -> A18R:G: pairing parallel trans one_hbond Bs/Ww } 0 9 {A18R:G -> A15R:U: pairing parallel trans one_hbond Ww/Bs } 0 10 {A16R:U -> A17R:C: adjacent_5p } 0 11 {A17R:C -> A16R:U: adjacent_3p } 0 12 {A17R:C -> A18R:G: adjacent_5p } 0 13 {A18R:G -> A17R:C: adjacent_3p } 0 14 {A18R:G -> A19R:G: adjacent_5p outward } 0 15 {A19R:G -> A18R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 . 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . 9 . 13 . 14 5 3 . . . 15 . MOLECULE: [GraphModel] [Vertices] 0 R8R:G 0 1 R9R:A 0 2 R10R:U 0 3 R11R:C 0 4 R12R:A 0 5 R13R:C 0 [Edges] 0 {R8R:G -> R9R:A: adjacent_5p upward } 0 1 {R9R:A -> R8R:G: adjacent_3p downward } 0 2 {R8R:G -> R13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {R13R:C -> R8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {R9R:A -> R10R:U: adjacent_5p } 0 5 {R10R:U -> R9R:A: adjacent_3p } 0 6 {R9R:A -> R11R:C: upward } 0 7 {R11R:C -> R9R:A: downward } 0 8 {R10R:U -> R11R:C: adjacent_5p } 0 9 {R11R:C -> R10R:U: adjacent_3p } 0 10 {R11R:C -> R12R:A: adjacent_5p } 0 11 {R12R:A -> R11R:C: adjacent_3p } 0 12 {R12R:A -> R13R:C: adjacent_5p } 0 13 {R13R:C -> R12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 S8R:G 0 1 S9R:A 0 2 S10R:U 0 3 S11R:C 0 4 S12R:A 0 5 S13R:C 0 [Edges] 0 {S8R:G -> S9R:A: adjacent_5p upward } 0 1 {S9R:A -> S8R:G: adjacent_3p downward } 0 2 {S8R:G -> S13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {S13R:C -> S8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {S9R:A -> S10R:U: adjacent_5p } 0 5 {S10R:U -> S9R:A: adjacent_3p } 0 6 {S9R:A -> S11R:C: upward } 0 7 {S11R:C -> S9R:A: downward } 0 8 {S10R:U -> S11R:C: adjacent_5p } 0 9 {S11R:C -> S10R:U: adjacent_3p } 0 10 {S11R:C -> S12R:A: adjacent_5p } 0 11 {S12R:A -> S11R:C: adjacent_3p } 0 12 {S12R:A -> S13R:C: adjacent_5p } 0 13 {S13R:C -> S12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 B8R:C 0 1 B9R:U 0 2 B10R:U 0 3 B11R:C 0 4 B12R:G 0 5 B13R:G 0 [Edges] 0 {B8R:C -> B9R:U: adjacent_5p upward } 0 1 {B9R:U -> B8R:C: adjacent_3p downward } 0 2 {B8R:C -> B13R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {B13R:G -> B8R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {B9R:U -> B10R:U: adjacent_5p } 0 5 {B10R:U -> B9R:U: adjacent_3p } 0 6 {B9R:U -> B11R:C: upward } 0 7 {B11R:C -> B9R:U: downward } 0 8 {B9R:U -> B12R:G: pairing parallel trans 87 Bs/Ww } 0 9 {B12R:G -> B9R:U: pairing parallel trans 87 Ww/Bs } 0 10 {B10R:U -> B11R:C: adjacent_5p } 0 11 {B11R:C -> B10R:U: adjacent_3p } 0 12 {B11R:C -> B12R:G: adjacent_5p } 0 13 {B12R:G -> B11R:C: adjacent_3p } 0 14 {B12R:G -> B13R:G: adjacent_5p } 0 15 {B13R:G -> B12R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 . 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . 9 . 13 . 14 5 3 . . . 15 . [GraphModel] [Vertices] 0 B32R:C 0 1 B33R:U 0 2 B34R:U 0 3 B35R:C 0 4 B36R:G 0 5 B37R:G 0 [Edges] 0 {B32R:C -> B33R:U: adjacent_5p upward } 0 1 {B33R:U -> B32R:C: adjacent_3p downward } 0 2 {B32R:C -> B37R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {B37R:G -> B32R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {B33R:U -> B34R:U: adjacent_5p } 0 5 {B34R:U -> B33R:U: adjacent_3p } 0 6 {B34R:U -> B35R:C: adjacent_5p } 0 7 {B35R:C -> B34R:U: adjacent_3p } 0 8 {B35R:C -> B36R:G: adjacent_5p } 0 9 {B36R:G -> B35R:C: adjacent_3p } 0 10 {B36R:G -> B37R:G: adjacent_5p } 0 11 {B37R:G -> B36R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A33R:U 0 1 A34R:G 0 2 A35R:A 0 3 A36R:A 0 4 A37R:A 0 5 A38R:G 0 [Edges] 0 {A33R:U -> A34R:G: adjacent_5p upward } 0 1 {A34R:G -> A33R:U: adjacent_3p downward } 0 2 {A33R:U -> A38R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {A38R:G -> A33R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {A34R:G -> A35R:A: adjacent_5p } 0 5 {A35R:A -> A34R:G: adjacent_3p } 0 6 {A34R:G -> A37R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A37R:A -> A34R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A35R:A -> A36R:A: adjacent_5p upward } 0 9 {A36R:A -> A35R:A: adjacent_3p downward } 0 10 {A36R:A -> A37R:A: adjacent_5p upward } 0 11 {A37R:A -> A36R:A: adjacent_3p downward } 0 12 {A37R:A -> A38R:G: adjacent_5p upward } 0 13 {A38R:G -> A37R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 C13R:C 0 1 C14R:U 0 2 C15R:A 0 3 C16R:C 0 4 C17R:G 0 5 C18R:G 0 [Edges] 0 {C13R:C -> C14R:U: adjacent_5p upward } 0 1 {C14R:U -> C13R:C: adjacent_3p downward } 0 2 {C13R:C -> C18R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {C18R:G -> C13R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {C14R:U -> C15R:A: adjacent_5p } 0 5 {C15R:A -> C14R:U: adjacent_3p } 0 6 {C14R:U -> C16R:C: upward } 0 7 {C16R:C -> C14R:U: downward } 0 8 {C14R:U -> C17R:G: pairing parallel trans 87 Bs/Ww } 0 9 {C17R:G -> C14R:U: pairing parallel trans 87 Ww/Bs } 0 10 {C15R:A -> C16R:C: adjacent_5p } 0 11 {C16R:C -> C15R:A: adjacent_3p } 0 12 {C16R:C -> C17R:G: adjacent_5p } 0 13 {C17R:G -> C16R:C: adjacent_3p } 0 14 {C17R:G -> C18R:G: adjacent_5p } 0 15 {C18R:G -> C17R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 . 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . 9 . 13 . 14 5 3 . . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A12R:G 0 1 A13R:G 0 2 A14R:G 0 3 A15R:A 0 4 A16R:G 0 5 A17R:C 0 [Edges] 0 {A12R:G -> A13R:G: adjacent_5p upward } 0 1 {A13R:G -> A12R:G: adjacent_3p downward } 0 2 {A12R:G -> A17R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A17R:C -> A12R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A13R:G -> A14R:G: adjacent_5p } 0 5 {A14R:G -> A13R:G: adjacent_3p } 0 6 {A13R:G -> A16R:G: pairing antiparallel cis one_hbond 108 Sw/Hh } 0 7 {A16R:G -> A13R:G: pairing antiparallel cis one_hbond 108 Hh/Sw } 0 8 {A14R:G -> A15R:A: adjacent_5p upward } 0 9 {A15R:A -> A14R:G: adjacent_3p downward } 0 10 {A15R:A -> A16R:G: adjacent_5p upward } 0 11 {A16R:G -> A15R:A: adjacent_3p downward } 0 12 {A16R:G -> A17R:C: adjacent_5p upward } 0 13 {A17R:C -> A16R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A149R:G 0 1 A150R:G 0 2 A151R:A 0 3 A152R:A 0 4 A153R:A 0 5 A154R:C 0 [Edges] 0 {A149R:G -> A150R:G: adjacent_5p upward } 0 1 {A150R:G -> A149R:G: adjacent_3p downward } 0 2 {A149R:G -> A154R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A154R:C -> A149R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A150R:G -> A151R:A: adjacent_5p } 0 5 {A151R:A -> A150R:G: adjacent_3p } 0 6 {A150R:G -> A153R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A153R:A -> A150R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A151R:A -> A152R:A: adjacent_5p upward } 0 9 {A152R:A -> A151R:A: adjacent_3p downward } 0 10 {A152R:A -> A153R:A: adjacent_5p upward } 0 11 {A153R:A -> A152R:A: adjacent_3p downward } 0 12 {A153R:A -> A154R:C: adjacent_5p upward } 0 13 {A154R:C -> A153R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 A181R:G 0 1 A182R:U 0 2 A183R:A 0 3 A184R:A 0 4 A185R:U 0 5 A186R:A 0 [Edges] 0 {A181R:G -> A182R:U: adjacent_5p upward } 0 1 {A182R:U -> A181R:G: adjacent_3p downward } 0 2 {A181R:G -> A186R:A: pairing parallel trans 57 Ss/Ss } 0 3 {A186R:A -> A181R:G: pairing parallel trans 57 Ss/Ss } 0 4 {A182R:U -> A183R:A: adjacent_5p } 0 5 {A183R:A -> A182R:U: adjacent_3p } 0 6 {A183R:A -> A184R:A: adjacent_5p upward } 0 7 {A184R:A -> A183R:A: adjacent_3p downward } 0 8 {A184R:A -> A185R:U: adjacent_5p } 0 9 {A185R:U -> A184R:A: adjacent_3p } 0 10 {A185R:U -> A186R:A: adjacent_5p } 0 11 {A186R:A -> A185R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 B149R:G 0 1 B150R:G 0 2 B151R:A 0 3 B152R:A 0 4 B153R:A 0 5 B154R:C 0 [Edges] 0 {B149R:G -> B150R:G: adjacent_5p upward } 0 1 {B150R:G -> B149R:G: adjacent_3p downward } 0 2 {B149R:G -> B154R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {B154R:C -> B149R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {B150R:G -> B151R:A: adjacent_5p } 0 5 {B151R:A -> B150R:G: adjacent_3p } 0 6 {B150R:G -> B153R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {B153R:A -> B150R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {B151R:A -> B152R:A: adjacent_5p upward } 0 9 {B152R:A -> B151R:A: adjacent_3p downward } 0 10 {B152R:A -> B153R:A: adjacent_5p upward } 0 11 {B153R:A -> B152R:A: adjacent_3p downward } 0 12 {B153R:A -> B154R:C: adjacent_5p upward } 0 13 {B154R:C -> B153R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 B146R:G 0 1 B147R:G 0 2 B148R:G 0 3 B149R:A 0 4 B150R:G 0 5 B151R:C 0 [Edges] 0 {B146R:G -> B147R:G: adjacent_5p upward } 0 1 {B147R:G -> B146R:G: adjacent_3p downward } 0 2 {B146R:G -> B151R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {B151R:C -> B146R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {B147R:G -> B148R:G: adjacent_5p } 0 5 {B148R:G -> B147R:G: adjacent_3p } 0 6 {B148R:G -> B149R:A: adjacent_5p upward } 0 7 {B149R:A -> B148R:G: adjacent_3p downward } 0 8 {B149R:A -> B150R:G: adjacent_5p upward } 0 9 {B150R:G -> B149R:A: adjacent_3p downward } 0 10 {B150R:G -> B151R:C: adjacent_5p } 0 11 {B151R:C -> B150R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 B197R:G 0 1 B198R:G 0 2 B199R:A 0 3 B200R:A 0 4 B201R:A 0 5 B202R:C 0 [Edges] 0 {B197R:G -> B198R:G: adjacent_5p upward } 0 1 {B198R:G -> B197R:G: adjacent_3p downward } 0 2 {B197R:G -> B202R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {B202R:C -> B197R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {B198R:G -> B199R:A: adjacent_5p } 0 5 {B199R:A -> B198R:G: adjacent_3p } 0 6 {B199R:A -> B200R:A: adjacent_5p upward } 0 7 {B200R:A -> B199R:A: adjacent_3p downward } 0 8 {B200R:A -> B201R:A: adjacent_5p upward } 0 9 {B201R:A -> B200R:A: adjacent_3p downward } 0 10 {B201R:A -> B202R:C: adjacent_5p } 0 11 {B202R:C -> B201R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 14R:C 0 1 15R:G 0 2 16R:A 0 3 17R:A 0 4 18R:A 0 5 19R:G 0 [Edges] 0 {14R:C -> 15R:G: adjacent_5p } 0 1 {15R:G -> 14R:C: adjacent_3p } 0 2 {14R:C -> 19R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {19R:G -> 14R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {15R:G -> 16R:A: adjacent_5p } 0 5 {16R:A -> 15R:G: adjacent_3p } 0 6 {15R:G -> 19R:G: outward } 0 7 {19R:G -> 15R:G: outward } 0 8 {16R:A -> 17R:A: adjacent_5p upward } 0 9 {17R:A -> 16R:A: adjacent_3p downward } 0 10 {17R:A -> 18R:A: adjacent_5p upward } 0 11 {18R:A -> 17R:A: adjacent_3p downward } 0 12 {18R:A -> 19R:G: adjacent_5p upward } 0 13 {19R:G -> 18R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . MOLECULE: [GraphModel] [Vertices] 0 B74R:G 0 1 B75R:G 0 2 B76R:A 0 3 B77R:A 0 4 B78R:A 0 5 B79R:C 0 [Edges] 0 {B74R:G -> B75R:G: adjacent_5p upward } 0 1 {B75R:G -> B74R:G: adjacent_3p downward } 0 2 {B74R:G -> B79R:C: pairing antiparallel cis 130 Ww/Ws } 0 3 {B79R:C -> B74R:G: pairing antiparallel cis 130 Ws/Ww } 0 4 {B75R:G -> B76R:A: adjacent_5p } 0 5 {B76R:A -> B75R:G: adjacent_3p } 0 6 {B75R:G -> B78R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {B78R:A -> B75R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {B76R:A -> B77R:A: adjacent_5p outward } 0 9 {B77R:A -> B76R:A: adjacent_3p outward } 0 10 {B77R:A -> B78R:A: adjacent_5p upward } 0 11 {B78R:A -> B77R:A: adjacent_3p downward } 0 12 {B78R:A -> B79R:C: adjacent_5p } 0 13 {B79R:C -> B78R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 E74R:G 0 1 E75R:G 0 2 E76R:A 0 3 E77R:A 0 4 E78R:A 0 5 E79R:C 0 [Edges] 0 {E74R:G -> E75R:G: adjacent_5p upward } 0 1 {E75R:G -> E74R:G: adjacent_3p downward } 0 2 {E74R:G -> E79R:C: pairing antiparallel cis one_hbond Ww/Ww } 0 3 {E79R:C -> E74R:G: pairing antiparallel cis one_hbond Ww/Ww } 0 4 {E75R:G -> E76R:A: adjacent_5p } 0 5 {E76R:A -> E75R:G: adjacent_3p } 0 6 {E75R:G -> E78R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {E78R:A -> E75R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {E75R:G -> E79R:C: outward } 0 9 {E79R:C -> E75R:G: outward } 0 10 {E76R:A -> E77R:A: adjacent_5p upward } 0 11 {E77R:A -> E76R:A: adjacent_3p downward } 0 12 {E77R:A -> E78R:A: adjacent_5p upward } 0 13 {E78R:A -> E77R:A: adjacent_3p downward } 0 14 {E78R:A -> E79R:C: adjacent_5p } 0 15 {E79R:C -> E78R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A17R:C 0 1 A18R:U 0 2 A19R:U 0 3 A20R:C 0 4 A21R:G 0 5 A22R:G 0 [Edges] 0 {A17R:C -> A18R:U: adjacent_5p upward } 0 1 {A18R:U -> A17R:C: adjacent_3p downward } 0 2 {A17R:C -> A22R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A22R:G -> A17R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A18R:U -> A19R:U: adjacent_5p } 0 5 {A19R:U -> A18R:U: adjacent_3p } 0 6 {A18R:U -> A20R:C: upward } 0 7 {A20R:C -> A18R:U: downward } 0 8 {A18R:U -> A21R:G: pairing parallel trans one_hbond 87 Bs/Ww } 0 9 {A21R:G -> A18R:U: pairing parallel trans one_hbond 87 Ww/Bs } 0 10 {A19R:U -> A20R:C: adjacent_5p } 0 11 {A20R:C -> A19R:U: adjacent_3p } 0 12 {A20R:C -> A21R:G: adjacent_5p } 0 13 {A21R:G -> A20R:C: adjacent_3p } 0 14 {A21R:G -> A22R:G: adjacent_5p outward } 0 15 {A22R:G -> A21R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 . 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . 9 . 13 . 14 5 3 . . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A10R:C 0 1 A11R:U 0 2 A12R:U 0 3 A13R:C 0 4 A14R:G 0 5 A15R:G 0 [Edges] 0 {A10R:C -> A11R:U: adjacent_5p upward } 0 1 {A11R:U -> A10R:C: adjacent_3p downward } 0 2 {A10R:C -> A15R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A15R:G -> A10R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A11R:U -> A12R:U: adjacent_5p } 0 5 {A12R:U -> A11R:U: adjacent_3p } 0 6 {A11R:U -> A13R:C: upward } 0 7 {A13R:C -> A11R:U: downward } 0 8 {A11R:U -> A14R:G: pairing parallel trans one_hbond Ws/Ww } 0 9 {A14R:G -> A11R:U: pairing parallel trans one_hbond Ww/Ws } 0 10 {A12R:U -> A13R:C: adjacent_5p } 0 11 {A13R:C -> A12R:U: adjacent_3p } 0 12 {A13R:C -> A14R:G: adjacent_5p } 0 13 {A14R:G -> A13R:C: adjacent_3p } 0 14 {A14R:G -> A15R:G: adjacent_5p outward } 0 15 {A15R:G -> A14R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 . 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . 9 . 13 . 14 5 3 . . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A9R:C 0 1 A10R:U 0 2 A11R:A 0 3 A12R:C 0 4 A13R:G 0 5 A14R:G 0 [Edges] 0 {A9R:C -> A10R:U: adjacent_5p upward } 0 1 {A10R:U -> A9R:C: adjacent_3p downward } 0 2 {A9R:C -> A14R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A14R:G -> A9R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A10R:U -> A11R:A: adjacent_5p } 0 5 {A11R:A -> A10R:U: adjacent_3p } 0 6 {A10R:U -> A12R:C: upward } 0 7 {A12R:C -> A10R:U: downward } 0 8 {A10R:U -> A13R:G: pairing parallel trans one_hbond Bs/Ww } 0 9 {A13R:G -> A10R:U: pairing parallel trans one_hbond Ww/Bs } 0 10 {A10R:U -> A14R:G: pairing antiparallel cis one_hbond Ww/Wh } 0 11 {A14R:G -> A10R:U: pairing antiparallel cis one_hbond Wh/Ww } 0 12 {A11R:A -> A12R:C: adjacent_5p } 0 13 {A12R:C -> A11R:A: adjacent_3p } 0 14 {A12R:C -> A13R:G: adjacent_5p } 0 15 {A13R:G -> A12R:C: adjacent_3p } 0 16 {A13R:G -> A14R:G: adjacent_5p } 0 17 {A14R:G -> A13R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 10 2 . 5 . 12 . . 3 . 7 13 . 14 . 4 . 9 . 15 . 16 5 3 11 . . 17 . MOLECULE: [GraphModel] [Vertices] 0 A10R:A 0 1 A11R:G 0 2 A12R:G 0 3 A13R:U 0 4 A14R:C 0 5 A15R:U 0 [Edges] 0 {A10R:A -> A11R:G: adjacent_5p upward } 0 1 {A11R:G -> A10R:A: adjacent_3p downward } 0 2 {A10R:A -> A15R:U: pairing antiparallel cis XX Ww/Ww } 0 3 {A15R:U -> A10R:A: pairing antiparallel cis XX Ww/Ww } 0 4 {A11R:G -> A12R:G: adjacent_5p inward } 0 5 {A12R:G -> A11R:G: adjacent_3p inward } 0 6 {A12R:G -> A13R:U: adjacent_5p } 0 7 {A13R:U -> A12R:G: adjacent_3p } 0 8 {A13R:U -> A14R:C: adjacent_5p } 0 9 {A14R:C -> A13R:U: adjacent_3p } 0 10 {A14R:C -> A15R:U: adjacent_5p upward } 0 11 {A15R:U -> A14R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A14R:C 0 1 A15R:U 0 2 A16R:U 0 3 A17R:C 0 4 A18R:G 0 5 A19R:G 0 [Edges] 0 {A14R:C -> A15R:U: adjacent_5p upward } 0 1 {A15R:U -> A14R:C: adjacent_3p downward } 0 2 {A14R:C -> A19R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A19R:G -> A14R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A15R:U -> A16R:U: adjacent_5p } 0 5 {A16R:U -> A15R:U: adjacent_3p } 0 6 {A15R:U -> A17R:C: upward } 0 7 {A17R:C -> A15R:U: downward } 0 8 {A16R:U -> A17R:C: adjacent_5p } 0 9 {A17R:C -> A16R:U: adjacent_3p } 0 10 {A17R:C -> A18R:G: adjacent_5p } 0 11 {A18R:G -> A17R:C: adjacent_3p } 0 12 {A18R:G -> A19R:G: adjacent_5p } 0 13 {A19R:G -> A18R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 C40R:U 0 1 C41R:G 0 2 C42R:C 0 3 C43R:C 0 4 C44R:G 0 5 C45R:A 0 [Edges] 0 {C40R:U -> C41R:G: adjacent_5p } 0 1 {C41R:G -> C40R:U: adjacent_3p } 0 2 {C40R:U -> C45R:A: pairing antiparallel trans one_hbond 45 Ss/Hw } 0 3 {C45R:A -> C40R:U: pairing antiparallel trans one_hbond 45 Hw/Ss } 0 4 {C41R:G -> C42R:C: adjacent_5p } 0 5 {C42R:C -> C41R:G: adjacent_3p } 0 6 {C42R:C -> C43R:C: adjacent_5p upward } 0 7 {C43R:C -> C42R:C: adjacent_3p downward } 0 8 {C43R:C -> C44R:G: adjacent_5p } 0 9 {C44R:G -> C43R:C: adjacent_3p } 0 10 {C43R:C -> C45R:A: upward } 0 11 {C45R:A -> C43R:C: downward } 0 12 {C44R:G -> C45R:A: adjacent_5p } 0 13 {C45R:A -> C44R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 10 4 . . . 9 . 12 5 3 . . 11 13 . [GraphModel] [Vertices] 0 D40R:U 0 1 D41R:G 0 2 D42R:C 0 3 D43R:C 0 4 D44R:G 0 5 D45R:A 0 [Edges] 0 {D40R:U -> D41R:G: adjacent_5p } 0 1 {D41R:G -> D40R:U: adjacent_3p } 0 2 {D40R:U -> D45R:A: pairing antiparallel trans one_hbond 45 Ss/Hw } 0 3 {D45R:A -> D40R:U: pairing antiparallel trans one_hbond 45 Hw/Ss } 0 4 {D41R:G -> D42R:C: adjacent_5p } 0 5 {D42R:C -> D41R:G: adjacent_3p } 0 6 {D42R:C -> D43R:C: adjacent_5p upward } 0 7 {D43R:C -> D42R:C: adjacent_3p downward } 0 8 {D43R:C -> D44R:G: adjacent_5p } 0 9 {D44R:G -> D43R:C: adjacent_3p } 0 10 {D43R:C -> D45R:A: upward } 0 11 {D45R:A -> D43R:C: downward } 0 12 {D44R:G -> D45R:A: adjacent_5p } 0 13 {D45R:A -> D44R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 10 4 . . . 9 . 12 5 3 . . 11 13 . MOLECULE: [GraphModel] [Vertices] 0 C1093R:G 0 1 C1094R:U 0 2 C1095R:A 0 3 C1096R:A 0 4 C1097R:C 0 5 C1098R:A 0 [Edges] 0 {C1093R:G -> C1094R:U: adjacent_5p upward } 0 1 {C1094R:U -> C1093R:G: adjacent_3p downward } 0 2 {C1093R:G -> C1098R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {C1098R:A -> C1093R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {C1094R:U -> C1095R:A: adjacent_5p } 0 5 {C1095R:A -> C1094R:U: adjacent_3p } 0 6 {C1095R:A -> C1096R:A: adjacent_5p upward } 0 7 {C1096R:A -> C1095R:A: adjacent_3p downward } 0 8 {C1096R:A -> C1097R:C: adjacent_5p upward } 0 9 {C1097R:C -> C1096R:A: adjacent_3p downward } 0 10 {C1097R:C -> C1098R:A: adjacent_5p upward } 0 11 {C1098R:A -> C1097R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 D1093R:G 0 1 D1094R:U 0 2 D1095R:A 0 3 D1096R:A 0 4 D1097R:C 0 5 D1098R:A 0 [Edges] 0 {D1093R:G -> D1094R:U: adjacent_5p upward } 0 1 {D1094R:U -> D1093R:G: adjacent_3p downward } 0 2 {D1093R:G -> D1098R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {D1098R:A -> D1093R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {D1094R:U -> D1095R:A: adjacent_5p } 0 5 {D1095R:A -> D1094R:U: adjacent_3p } 0 6 {D1095R:A -> D1096R:A: adjacent_5p upward } 0 7 {D1096R:A -> D1095R:A: adjacent_3p downward } 0 8 {D1096R:A -> D1097R:C: adjacent_5p upward } 0 9 {D1097R:C -> D1096R:A: adjacent_3p downward } 0 10 {D1097R:C -> D1098R:A: adjacent_5p upward } 0 11 {D1098R:A -> D1097R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A86R:C 0 1 A87R:G 0 2 A88.AR:A 0 3 A88.BR:G 0 4 A89R:A 0 5 A90R:G 0 [Edges] 0 {A86R:C -> A87R:G: adjacent_5p upward } 0 1 {A87R:G -> A86R:C: adjacent_3p downward } 0 2 {A86R:C -> A90R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A90R:G -> A86R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A87R:G -> A88.AR:A: adjacent_5p } 0 5 {A88.AR:A -> A87R:G: adjacent_3p } 0 6 {A87R:G -> A89R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A89R:A -> A87R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A88.AR:A -> A88.BR:G: adjacent_5p upward } 0 9 {A88.BR:G -> A88.AR:A: adjacent_3p downward } 0 10 {A88.BR:G -> A89R:A: adjacent_5p upward } 0 11 {A89R:A -> A88.BR:G: adjacent_3p downward } 0 12 {A89R:A -> A90R:G: adjacent_5p upward } 0 13 {A90R:G -> A89R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A2658R:C 0 1 A2659R:G 0 2 A2660R:U 0 3 A2661R:A 0 4 A2662R:A 0 5 A2663R:G 0 [Edges] 0 {A2658R:C -> A2659R:G: adjacent_5p upward } 0 1 {A2659R:G -> A2658R:C: adjacent_3p downward } 0 2 {A2658R:C -> A2663R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A2663R:G -> A2658R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A2659R:G -> A2660R:U: adjacent_5p } 0 5 {A2660R:U -> A2659R:G: adjacent_3p } 0 6 {A2659R:G -> A2662R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A2662R:A -> A2659R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A2659R:G -> A2663R:G: outward } 0 9 {A2663R:G -> A2659R:G: outward } 0 10 {A2660R:U -> A2661R:A: adjacent_5p upward } 0 11 {A2661R:A -> A2660R:U: adjacent_3p downward } 0 12 {A2661R:A -> A2662R:A: adjacent_5p upward } 0 13 {A2662R:A -> A2661R:A: adjacent_3p downward } 0 14 {A2662R:A -> A2663R:G: adjacent_5p } 0 15 {A2663R:G -> A2662R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 B10R:A 0 1 B11R:G 0 2 B12R:G 0 3 B13R:A 0 4 B14R:U 0 5 B15R:A 0 [Edges] 0 {B10R:A -> B11R:G: adjacent_5p upward } 0 1 {B11R:G -> B10R:A: adjacent_3p downward } 0 2 {B10R:A -> B15R:A: pairing antiparallel trans V Ww/Hh } 0 3 {B15R:A -> B10R:A: pairing antiparallel trans V Hh/Ww } 0 4 {B11R:G -> B12R:G: adjacent_5p } 0 5 {B12R:G -> B11R:G: adjacent_3p } 0 6 {B11R:G -> B13R:A: inward } 0 7 {B13R:A -> B11R:G: inward } 0 8 {B12R:G -> B13R:A: adjacent_5p } 0 9 {B13R:A -> B12R:G: adjacent_3p } 0 10 {B13R:A -> B14R:U: adjacent_5p } 0 11 {B14R:U -> B13R:A: adjacent_3p } 0 12 {B14R:U -> B15R:A: adjacent_5p } 0 13 {B15R:A -> B14R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 B25R:C 0 1 B26R:G 0 2 B27R:C 0 3 B28R:A 0 4 B29R:A 0 5 B30R:G 0 [Edges] 0 {B25R:C -> B26R:G: adjacent_5p upward } 0 1 {B26R:G -> B25R:C: adjacent_3p downward } 0 2 {B25R:C -> B30R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {B30R:G -> B25R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {B26R:G -> B27R:C: adjacent_5p } 0 5 {B27R:C -> B26R:G: adjacent_3p } 0 6 {B26R:G -> B29R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {B29R:A -> B26R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {B27R:C -> B28R:A: adjacent_5p upward } 0 9 {B28R:A -> B27R:C: adjacent_3p downward } 0 10 {B28R:A -> B29R:A: adjacent_5p upward } 0 11 {B29R:A -> B28R:A: adjacent_3p downward } 0 12 {B29R:A -> B30R:G: adjacent_5p upward } 0 13 {B30R:G -> B29R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A9R:C 0 1 A10R:G 0 2 A11R:A 0 3 A12R:A 0 4 A13R:A 0 5 A14R:G 0 [Edges] 0 {A9R:C -> A10R:G: adjacent_5p upward } 0 1 {A10R:G -> A9R:C: adjacent_3p downward } 0 2 {A9R:C -> A14R:G: pairing antiparallel cis Ww/Ww } 0 3 {A14R:G -> A9R:C: pairing antiparallel cis Ww/Ww } 0 4 {A10R:G -> A11R:A: adjacent_5p } 0 5 {A11R:A -> A10R:G: adjacent_3p } 0 6 {A10R:G -> A13R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A13R:A -> A10R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A10R:G -> A14R:G: outward } 0 9 {A14R:G -> A10R:G: outward } 0 10 {A11R:A -> A12R:A: adjacent_5p upward } 0 11 {A12R:A -> A11R:A: adjacent_3p downward } 0 12 {A12R:A -> A13R:A: adjacent_5p upward } 0 13 {A13R:A -> A12R:A: adjacent_3p downward } 0 14 {A13R:A -> A14R:G: adjacent_5p upward } 0 15 {A14R:G -> A13R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A15R:G 0 1 A16R:G 0 2 A17R:A 0 3 A18R:G 0 4 A19R:A 0 5 A20R:C 0 [Edges] 0 {A15R:G -> A16R:G: adjacent_5p upward } 0 1 {A16R:G -> A15R:G: adjacent_3p downward } 0 2 {A15R:G -> A20R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A20R:C -> A15R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A16R:G -> A17R:A: adjacent_5p } 0 5 {A17R:A -> A16R:G: adjacent_3p } 0 6 {A16R:G -> A19R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A19R:A -> A16R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A17R:A -> A18R:G: adjacent_5p upward } 0 9 {A18R:G -> A17R:A: adjacent_3p downward } 0 10 {A18R:G -> A19R:A: adjacent_5p upward } 0 11 {A19R:A -> A18R:G: adjacent_3p downward } 0 12 {A19R:A -> A20R:C: adjacent_5p } 0 13 {A20R:C -> A19R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A15R:G 0 1 A16R:G 0 2 A17R:A 0 3 A18R:A 0 4 A19R:A 0 5 A20R:C 0 [Edges] 0 {A15R:G -> A16R:G: adjacent_5p } 0 1 {A16R:G -> A15R:G: adjacent_3p } 0 2 {A15R:G -> A20R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A20R:C -> A15R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A16R:G -> A17R:A: adjacent_5p } 0 5 {A17R:A -> A16R:G: adjacent_3p } 0 6 {A16R:G -> A19R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A19R:A -> A16R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A17R:A -> A18R:A: adjacent_5p upward } 0 9 {A18R:A -> A17R:A: adjacent_3p downward } 0 10 {A18R:A -> A19R:A: adjacent_5p upward } 0 11 {A19R:A -> A18R:A: adjacent_3p downward } 0 12 {A19R:A -> A20R:C: adjacent_5p } 0 13 {A20R:C -> A19R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 B10R:C 0 1 B11R:U 0 2 B12R:A 0 3 B13R:A 0 4 B14R:C 0 5 B15R:C 0 [Edges] 0 {B10R:C -> B11R:U: adjacent_5p upward } 0 1 {B11R:U -> B10R:C: adjacent_3p downward } 0 2 {B10R:C -> B15R:C: pairing antiparallel cis one_hbond 137 Ww/Wh } 0 3 {B15R:C -> B10R:C: pairing antiparallel cis one_hbond 137 Wh/Ww } 0 4 {B11R:U -> B12R:A: adjacent_5p } 0 5 {B12R:A -> B11R:U: adjacent_3p } 0 6 {B12R:A -> B13R:A: adjacent_5p upward } 0 7 {B13R:A -> B12R:A: adjacent_3p downward } 0 8 {B13R:A -> B14R:C: adjacent_5p upward } 0 9 {B14R:C -> B13R:A: adjacent_3p downward } 0 10 {B14R:C -> B15R:C: adjacent_5p upward } 0 11 {B15R:C -> B14R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A13R:C 0 1 A14R:G 0 2 A15R:A 0 3 A16R:A 0 4 A17R:A 0 5 A18R:G 0 [Edges] 0 {A13R:C -> A14R:G: adjacent_5p upward } 0 1 {A14R:G -> A13R:C: adjacent_3p downward } 0 2 {A13R:C -> A18R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A18R:G -> A13R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A14R:G -> A15R:A: adjacent_5p } 0 5 {A15R:A -> A14R:G: adjacent_3p } 0 6 {A14R:G -> A17R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A17R:A -> A14R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A14R:G -> A18R:G: outward } 0 9 {A18R:G -> A14R:G: outward } 0 10 {A15R:A -> A16R:A: adjacent_5p upward } 0 11 {A16R:A -> A15R:A: adjacent_3p downward } 0 12 {A16R:A -> A17R:A: adjacent_5p upward } 0 13 {A17R:A -> A16R:A: adjacent_3p downward } 0 14 {A17R:A -> A18R:G: adjacent_5p upward } 0 15 {A18R:G -> A17R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 A23R:U 0 1 A24R:U 0 2 A25R:G 0 3 A26R:G 0 4 A27R:C 0 5 A28R:A 0 [Edges] 0 {A23R:U -> A24R:U: adjacent_5p } 0 1 {A24R:U -> A23R:U: adjacent_3p } 0 2 {A23R:U -> A28R:A: pairing parallel cis XXIII Ww/Hh } 0 3 {A28R:A -> A23R:U: pairing parallel cis XXIII Hh/Ww } 0 4 {A24R:U -> A25R:G: adjacent_5p } 0 5 {A25R:G -> A24R:U: adjacent_3p } 0 6 {A24R:U -> A26R:G: inward } 0 7 {A26R:G -> A24R:U: inward } 0 8 {A25R:G -> A26R:G: adjacent_5p upward } 0 9 {A26R:G -> A25R:G: adjacent_3p downward } 0 10 {A26R:G -> A27R:C: adjacent_5p } 0 11 {A27R:C -> A26R:G: adjacent_3p } 0 12 {A27R:C -> A28R:A: adjacent_5p } 0 13 {A28R:A -> A27R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 C1093R:G 0 1 C1094R:U 0 2 C1095R:A 0 3 C1096R:A 0 4 C1097R:C 0 5 C1098R:A 0 [Edges] 0 {C1093R:G -> C1094R:U: adjacent_5p upward } 0 1 {C1094R:U -> C1093R:G: adjacent_3p downward } 0 2 {C1093R:G -> C1098R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {C1098R:A -> C1093R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {C1094R:U -> C1095R:A: adjacent_5p } 0 5 {C1095R:A -> C1094R:U: adjacent_3p } 0 6 {C1095R:A -> C1096R:A: adjacent_5p upward } 0 7 {C1096R:A -> C1095R:A: adjacent_3p downward } 0 8 {C1096R:A -> C1097R:C: adjacent_5p upward } 0 9 {C1097R:C -> C1096R:A: adjacent_3p downward } 0 10 {C1097R:C -> C1098R:A: adjacent_5p upward } 0 11 {C1098R:A -> C1097R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 C13R:U 0 1 C14R:G 0 2 C15R:U 0 3 C16R:A 0 4 C17R:A 0 5 C18R:G 0 [Edges] 0 {C13R:U -> C14R:G: adjacent_5p upward } 0 1 {C14R:G -> C13R:U: adjacent_3p downward } 0 2 {C13R:U -> C18R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {C18R:G -> C13R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {C14R:G -> C15R:U: adjacent_5p } 0 5 {C15R:U -> C14R:G: adjacent_3p } 0 6 {C14R:G -> C17R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {C17R:A -> C14R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {C15R:U -> C16R:A: adjacent_5p } 0 9 {C16R:A -> C15R:U: adjacent_3p } 0 10 {C15R:U -> C17R:A: outward } 0 11 {C17R:A -> C15R:U: outward } 0 12 {C16R:A -> C17R:A: adjacent_5p } 0 13 {C17R:A -> C16R:A: adjacent_3p } 0 14 {C17R:A -> C18R:G: adjacent_5p upward } 0 15 {C18R:G -> C17R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 10 . 3 . . 9 . 12 . 4 . 7 11 13 . 14 5 3 . . . 15 . [GraphModel] [Vertices] 0 D13R:U 0 1 D14R:G 0 2 D15R:U 0 3 D16R:A 0 4 D17R:A 0 5 D18R:G 0 [Edges] 0 {D13R:U -> D14R:G: adjacent_5p } 0 1 {D14R:G -> D13R:U: adjacent_3p } 0 2 {D13R:U -> D18R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {D18R:G -> D13R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {D14R:G -> D15R:U: adjacent_5p } 0 5 {D15R:U -> D14R:G: adjacent_3p } 0 6 {D15R:U -> D16R:A: adjacent_5p } 0 7 {D16R:A -> D15R:U: adjacent_3p } 0 8 {D16R:A -> D17R:A: adjacent_5p } 0 9 {D17R:A -> D16R:A: adjacent_3p } 0 10 {D17R:A -> D18R:G: adjacent_5p upward } 0 11 {D18R:G -> D17R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A8R:C 0 1 A9R:U 0 2 A10R:A 0 3 A11R:C 0 4 A12R:G 0 5 A13R:G 0 [Edges] 0 {A8R:C -> A9R:U: adjacent_5p upward } 0 1 {A9R:U -> A8R:C: adjacent_3p downward } 0 2 {A8R:C -> A13R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A13R:G -> A8R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A9R:U -> A10R:A: adjacent_5p } 0 5 {A10R:A -> A9R:U: adjacent_3p } 0 6 {A9R:U -> A12R:G: pairing parallel trans one_hbond 87 Ws/Ws } 0 7 {A12R:G -> A9R:U: pairing parallel trans one_hbond 87 Ws/Ws } 0 8 {A10R:A -> A11R:C: adjacent_5p } 0 9 {A11R:C -> A10R:A: adjacent_3p } 0 10 {A11R:C -> A12R:G: adjacent_5p } 0 11 {A12R:G -> A11R:C: adjacent_3p } 0 12 {A12R:G -> A13R:G: adjacent_5p } 0 13 {A13R:G -> A12R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A10R:C 0 1 A11R:G 0 2 A12R:A 0 3 A13R:A 0 4 A14R:A 0 5 A15R:G 0 [Edges] 0 {A10R:C -> A11R:G: adjacent_5p } 0 1 {A11R:G -> A10R:C: adjacent_3p } 0 2 {A10R:C -> A15R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A15R:G -> A10R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A11R:G -> A12R:A: adjacent_5p } 0 5 {A12R:A -> A11R:G: adjacent_3p } 0 6 {A11R:G -> A14R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A14R:A -> A11R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A12R:A -> A13R:A: adjacent_5p upward } 0 9 {A13R:A -> A12R:A: adjacent_3p downward } 0 10 {A13R:A -> A14R:A: adjacent_5p upward } 0 11 {A14R:A -> A13R:A: adjacent_3p downward } 0 12 {A14R:A -> A15R:G: adjacent_5p upward } 0 13 {A15R:G -> A14R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A28R:C 0 1 A29R:U 0 2 A30R:U 0 3 A31R:C 0 4 A32R:G 0 5 A33R:G 0 [Edges] 0 {A28R:C -> A29R:U: adjacent_5p upward } 0 1 {A29R:U -> A28R:C: adjacent_3p downward } 0 2 {A28R:C -> A33R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A33R:G -> A28R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A29R:U -> A30R:U: adjacent_5p } 0 5 {A30R:U -> A29R:U: adjacent_3p } 0 6 {A30R:U -> A31R:C: adjacent_5p } 0 7 {A31R:C -> A30R:U: adjacent_3p } 0 8 {A31R:C -> A32R:G: adjacent_5p } 0 9 {A32R:G -> A31R:C: adjacent_3p } 0 10 {A32R:G -> A33R:G: adjacent_5p outward } 0 11 {A33R:G -> A32R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A9R:C 0 1 A10R:A 0 2 A11R:C 0 3 A12R:A 0 4 A13R:A 0 5 A14R:G 0 [Edges] 0 {A9R:C -> A10R:A: adjacent_5p upward } 0 1 {A10R:A -> A9R:C: adjacent_3p downward } 0 2 {A9R:C -> A14R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A14R:G -> A9R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A10R:A -> A11R:C: adjacent_5p } 0 5 {A11R:C -> A10R:A: adjacent_3p } 0 6 {A10R:A -> A13R:A: pairing antiparallel trans one_hbond 41 Ss/Hw } 0 7 {A13R:A -> A10R:A: pairing antiparallel trans one_hbond 41 Hw/Ss } 0 8 {A11R:C -> A12R:A: adjacent_5p } 0 9 {A12R:A -> A11R:C: adjacent_3p } 0 10 {A12R:A -> A13R:A: adjacent_5p upward } 0 11 {A13R:A -> A12R:A: adjacent_3p downward } 0 12 {A13R:A -> A14R:G: adjacent_5p upward } 0 13 {A14R:G -> A13R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 B111R:C 0 1 B112R:G 0 2 B113R:U 0 3 B114R:A 0 4 B115R:A 0 5 B116R:G 0 [Edges] 0 {B111R:C -> B112R:G: adjacent_5p upward } 0 1 {B112R:G -> B111R:C: adjacent_3p downward } 0 2 {B111R:C -> B116R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {B116R:G -> B111R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {B112R:G -> B113R:U: adjacent_5p } 0 5 {B113R:U -> B112R:G: adjacent_3p } 0 6 {B112R:G -> B115R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {B115R:A -> B112R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {B112R:G -> B116R:G: outward } 0 9 {B116R:G -> B112R:G: outward } 0 10 {B113R:U -> B114R:A: adjacent_5p upward } 0 11 {B114R:A -> B113R:U: adjacent_3p downward } 0 12 {B114R:A -> B115R:A: adjacent_5p upward } 0 13 {B115R:A -> B114R:A: adjacent_3p downward } 0 14 {B115R:A -> B116R:G: adjacent_5p } 0 15 {B116R:G -> B115R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A14R:C 0 1 A15R:G 0 2 A16R:A 0 3 A17R:G 0 4 A18R:A 0 5 A19R:G 0 [Edges] 0 {A14R:C -> A15R:G: adjacent_5p upward } 0 1 {A15R:G -> A14R:C: adjacent_3p downward } 0 2 {A14R:C -> A19R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A19R:G -> A14R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A15R:G -> A16R:A: adjacent_5p } 0 5 {A16R:A -> A15R:G: adjacent_3p } 0 6 {A15R:G -> A18R:A: pairing antiparallel trans one_hbond 54 Ws/Hh } 0 7 {A18R:A -> A15R:G: pairing antiparallel trans one_hbond 54 Hh/Ws } 0 8 {A16R:A -> A17R:G: adjacent_5p } 0 9 {A17R:G -> A16R:A: adjacent_3p } 0 10 {A17R:G -> A18R:A: adjacent_5p upward } 0 11 {A18R:A -> A17R:G: adjacent_3p downward } 0 12 {A18R:A -> A19R:G: adjacent_5p upward } 0 13 {A19R:G -> A18R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 A24R:G 0 1 A25R:U 0 2 A26R:A 0 3 A27R:A 0 4 A28R:C 0 5 A29R:G 0 [Edges] 0 {A24R:G -> A25R:U: adjacent_5p } 0 1 {A25R:U -> A24R:G: adjacent_3p } 0 2 {A24R:G -> A29R:G: pairing antiparallel trans VII Ww/Hh } 0 3 {A29R:G -> A24R:G: pairing antiparallel trans VII Hh/Ww } 0 4 {A25R:U -> A26R:A: adjacent_5p } 0 5 {A26R:A -> A25R:U: adjacent_3p } 0 6 {A26R:A -> A27R:A: adjacent_5p upward } 0 7 {A27R:A -> A26R:A: adjacent_3p downward } 0 8 {A27R:A -> A28R:C: adjacent_5p upward } 0 9 {A28R:C -> A27R:A: adjacent_3p downward } 0 10 {A28R:C -> A29R:G: adjacent_5p } 0 11 {A29R:G -> A28R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A13R:G 0 1 A14R:G 0 2 A15R:A 0 3 A16R:G 0 4 A17R:A 0 5 A18R:C 0 [Edges] 0 {A13R:G -> A14R:G: adjacent_5p upward } 0 1 {A14R:G -> A13R:G: adjacent_3p downward } 0 2 {A13R:G -> A18R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A18R:C -> A13R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A14R:G -> A15R:A: adjacent_5p } 0 5 {A15R:A -> A14R:G: adjacent_3p } 0 6 {A14R:G -> A17R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A17R:A -> A14R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A15R:A -> A16R:G: adjacent_5p upward } 0 9 {A16R:G -> A15R:A: adjacent_3p downward } 0 10 {A16R:G -> A17R:A: adjacent_5p upward } 0 11 {A17R:A -> A16R:G: adjacent_3p downward } 0 12 {A17R:A -> A18R:C: adjacent_5p } 0 13 {A18R:C -> A17R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 B13R:G 0 1 B14R:G 0 2 B15R:A 0 3 B16R:G 0 4 B17R:A 0 5 B18R:C 0 [Edges] 0 {B13R:G -> B14R:G: adjacent_5p upward } 0 1 {B14R:G -> B13R:G: adjacent_3p downward } 0 2 {B13R:G -> B18R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {B18R:C -> B13R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {B14R:G -> B15R:A: adjacent_5p } 0 5 {B15R:A -> B14R:G: adjacent_3p } 0 6 {B15R:A -> B16R:G: adjacent_5p upward } 0 7 {B16R:G -> B15R:A: adjacent_3p downward } 0 8 {B16R:G -> B17R:A: adjacent_5p upward } 0 9 {B17R:A -> B16R:G: adjacent_3p downward } 0 10 {B17R:A -> B18R:C: adjacent_5p } 0 11 {B18R:C -> B17R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 C13R:G 0 1 C14R:G 0 2 C15R:A 0 3 C16R:G 0 4 C17R:A 0 5 C18R:C 0 [Edges] 0 {C13R:G -> C14R:G: adjacent_5p upward } 0 1 {C14R:G -> C13R:G: adjacent_3p downward } 0 2 {C13R:G -> C18R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {C18R:C -> C13R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {C14R:G -> C15R:A: adjacent_5p } 0 5 {C15R:A -> C14R:G: adjacent_3p } 0 6 {C14R:G -> C17R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {C17R:A -> C14R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {C15R:A -> C16R:G: adjacent_5p upward } 0 9 {C16R:G -> C15R:A: adjacent_3p downward } 0 10 {C16R:G -> C17R:A: adjacent_5p upward } 0 11 {C17R:A -> C16R:G: adjacent_3p downward } 0 12 {C17R:A -> C18R:C: adjacent_5p } 0 13 {C18R:C -> C17R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A13R:U 0 1 A14R:G 0 2 A15R:A 0 3 A16R:G 0 4 A17R:A 0 5 A18R:A 0 [Edges] 0 {A13R:U -> A14R:G: adjacent_5p upward } 0 1 {A14R:G -> A13R:U: adjacent_3p downward } 0 2 {A13R:U -> A18R:A: pairing antiparallel cis XX Ww/Ww } 0 3 {A18R:A -> A13R:U: pairing antiparallel cis XX Ww/Ww } 0 4 {A14R:G -> A15R:A: adjacent_5p } 0 5 {A15R:A -> A14R:G: adjacent_3p } 0 6 {A14R:G -> A17R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A17R:A -> A14R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A14R:G -> A18R:A: outward } 0 9 {A18R:A -> A14R:G: outward } 0 10 {A15R:A -> A16R:G: adjacent_5p upward } 0 11 {A16R:G -> A15R:A: adjacent_3p downward } 0 12 {A16R:G -> A17R:A: adjacent_5p upward } 0 13 {A17R:A -> A16R:G: adjacent_3p downward } 0 14 {A17R:A -> A18R:A: adjacent_5p } 0 15 {A18R:A -> A17R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 B13R:U 0 1 B14R:G 0 2 B15R:A 0 3 B16R:G 0 4 B17R:A 0 5 B18R:A 0 [Edges] 0 {B13R:U -> B14R:G: adjacent_5p upward } 0 1 {B14R:G -> B13R:U: adjacent_3p downward } 0 2 {B13R:U -> B18R:A: pairing antiparallel cis XX Ww/Ww } 0 3 {B18R:A -> B13R:U: pairing antiparallel cis XX Ww/Ww } 0 4 {B14R:G -> B15R:A: adjacent_5p } 0 5 {B15R:A -> B14R:G: adjacent_3p } 0 6 {B14R:G -> B17R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {B17R:A -> B14R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {B14R:G -> B18R:A: outward } 0 9 {B18R:A -> B14R:G: outward } 0 10 {B15R:A -> B16R:G: adjacent_5p upward } 0 11 {B16R:G -> B15R:A: adjacent_3p downward } 0 12 {B16R:G -> B17R:A: adjacent_5p upward } 0 13 {B17R:A -> B16R:G: adjacent_3p downward } 0 14 {B17R:A -> B18R:A: adjacent_5p } 0 15 {B18R:A -> B17R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 C13R:U 0 1 C14R:G 0 2 C15R:A 0 3 C16R:G 0 4 C17R:A 0 5 C18R:A 0 [Edges] 0 {C13R:U -> C14R:G: adjacent_5p upward } 0 1 {C14R:G -> C13R:U: adjacent_3p downward } 0 2 {C13R:U -> C18R:A: pairing antiparallel cis XX Ww/Ww } 0 3 {C18R:A -> C13R:U: pairing antiparallel cis XX Ww/Ww } 0 4 {C14R:G -> C15R:A: adjacent_5p } 0 5 {C15R:A -> C14R:G: adjacent_3p } 0 6 {C14R:G -> C17R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {C17R:A -> C14R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {C14R:G -> C18R:A: outward } 0 9 {C18R:A -> C14R:G: outward } 0 10 {C15R:A -> C16R:G: adjacent_5p upward } 0 11 {C16R:G -> C15R:A: adjacent_3p downward } 0 12 {C16R:G -> C17R:A: adjacent_5p upward } 0 13 {C17R:A -> C16R:G: adjacent_3p downward } 0 14 {C17R:A -> C18R:A: adjacent_5p } 0 15 {C18R:A -> C17R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A2658R:C 0 1 A2659R:G 0 2 A2660R:A 0 3 A2661R:G 0 4 A2662R:A 0 5 A2663R:G 0 [Edges] 0 {A2658R:C -> A2659R:G: adjacent_5p upward } 0 1 {A2659R:G -> A2658R:C: adjacent_3p downward } 0 2 {A2658R:C -> A2663R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A2663R:G -> A2658R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A2659R:G -> A2660R:A: adjacent_5p } 0 5 {A2660R:A -> A2659R:G: adjacent_3p } 0 6 {A2659R:G -> A2662R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A2662R:A -> A2659R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A2659R:G -> A2663R:G: outward } 0 9 {A2663R:G -> A2659R:G: outward } 0 10 {A2660R:A -> A2661R:G: adjacent_5p upward } 0 11 {A2661R:G -> A2660R:A: adjacent_3p downward } 0 12 {A2661R:G -> A2662R:A: adjacent_5p upward } 0 13 {A2662R:A -> A2661R:G: adjacent_3p downward } 0 14 {A2662R:A -> A2663R:G: adjacent_5p } 0 15 {A2663R:G -> A2662R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A14R:U 0 1 A15R:G 0 2 A16R:A 0 3 A17R:A 0 4 A18R:A 0 5 A19R:G 0 [Edges] 0 {A14R:U -> A15R:G: adjacent_5p upward } 0 1 {A15R:G -> A14R:U: adjacent_3p downward } 0 2 {A14R:U -> A19R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {A19R:G -> A14R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {A15R:G -> A16R:A: adjacent_5p } 0 5 {A16R:A -> A15R:G: adjacent_3p } 0 6 {A15R:G -> A18R:A: pairing antiparallel trans one_hbond Ss/Hw } 0 7 {A18R:A -> A15R:G: pairing antiparallel trans one_hbond Hw/Ss } 0 8 {A16R:A -> A17R:A: adjacent_5p upward } 0 9 {A17R:A -> A16R:A: adjacent_3p downward } 0 10 {A17R:A -> A18R:A: adjacent_5p upward } 0 11 {A18R:A -> A17R:A: adjacent_3p downward } 0 12 {A18R:A -> A19R:G: adjacent_5p } 0 13 {A19R:G -> A18R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A3R:G 0 1 A4R:C 0 2 A5R:A 0 3 A6R:A 0 4 A7R:G 0 5 A8R:C 0 [Edges] 0 {A3R:G -> A4R:C: adjacent_5p upward } 0 1 {A4R:C -> A3R:G: adjacent_3p downward } 0 2 {A3R:G -> A8R:C: pairing antiparallel cis Ww/Ww } 0 3 {A8R:C -> A3R:G: pairing antiparallel cis Ww/Ww } 0 4 {A4R:C -> A5R:A: adjacent_5p } 0 5 {A5R:A -> A4R:C: adjacent_3p } 0 6 {A4R:C -> A7R:G: pairing antiparallel cis one_hbond 122 Wh/Bh } 0 7 {A7R:G -> A4R:C: pairing antiparallel cis one_hbond 122 Bh/Wh } 0 8 {A5R:A -> A6R:A: adjacent_5p upward } 0 9 {A6R:A -> A5R:A: adjacent_3p downward } 0 10 {A6R:A -> A7R:G: adjacent_5p upward } 0 11 {A7R:G -> A6R:A: adjacent_3p downward } 0 12 {A7R:G -> A8R:C: adjacent_5p upward } 0 13 {A8R:C -> A7R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A18R:G 0 1 A19R:G 0 2 A20R:U 0 3 A21R:G 0 4 A22R:A 0 5 A23R:C 0 [Edges] 0 {A18R:G -> A19R:G: adjacent_5p upward } 0 1 {A19R:G -> A18R:G: adjacent_3p downward } 0 2 {A18R:G -> A23R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A23R:C -> A18R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A19R:G -> A20R:U: adjacent_5p } 0 5 {A20R:U -> A19R:G: adjacent_3p } 0 6 {A19R:G -> A22R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A22R:A -> A19R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A20R:U -> A21R:G: adjacent_5p upward } 0 9 {A21R:G -> A20R:U: adjacent_3p downward } 0 10 {A21R:G -> A22R:A: adjacent_5p upward } 0 11 {A22R:A -> A21R:G: adjacent_3p downward } 0 12 {A22R:A -> A23R:C: adjacent_5p } 0 13 {A23R:C -> A22R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A18R:G 0 1 A19R:G 0 2 A20R:U 0 3 A21R:G 0 4 A22R:A 0 5 A23R:C 0 [Edges] 0 {A18R:G -> A19R:G: adjacent_5p upward } 0 1 {A19R:G -> A18R:G: adjacent_3p downward } 0 2 {A18R:G -> A23R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A23R:C -> A18R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A19R:G -> A20R:U: adjacent_5p } 0 5 {A20R:U -> A19R:G: adjacent_3p } 0 6 {A19R:G -> A22R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A22R:A -> A19R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A20R:U -> A21R:G: adjacent_5p } 0 9 {A21R:G -> A20R:U: adjacent_3p } 0 10 {A21R:G -> A22R:A: adjacent_5p upward } 0 11 {A22R:A -> A21R:G: adjacent_3p downward } 0 12 {A22R:A -> A23R:C: adjacent_5p } 0 13 {A23R:C -> A22R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 21R:C 0 1 22R:U 0 2 23R:U 0 3 24R:C 0 4 25R:G 0 5 26R:G 0 [Edges] 0 {21R:C -> 22R:U: adjacent_5p upward } 0 1 {22R:U -> 21R:C: adjacent_3p downward } 0 2 {21R:C -> 26R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {26R:G -> 21R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {22R:U -> 23R:U: adjacent_5p inward } 0 5 {23R:U -> 22R:U: adjacent_3p inward } 0 6 {22R:U -> 25R:G: pairing parallel trans one_hbond Ws/Ww } 0 7 {25R:G -> 22R:U: pairing parallel trans one_hbond Ww/Ws } 0 8 {23R:U -> 24R:C: adjacent_5p } 0 9 {24R:C -> 23R:U: adjacent_3p } 0 10 {24R:C -> 25R:G: adjacent_5p } 0 11 {25R:G -> 24R:C: adjacent_3p } 0 12 {25R:G -> 26R:G: adjacent_5p } 0 13 {26R:G -> 25R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A13R:U 0 1 A14R:C 0 2 A15R:A 0 3 A16R:C 0 4 A17R:G 0 5 A18R:G 0 [Edges] 0 {A13R:U -> A14R:C: adjacent_5p upward } 0 1 {A14R:C -> A13R:U: adjacent_3p downward } 0 2 {A13R:U -> A18R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {A18R:G -> A13R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {A14R:C -> A15R:A: adjacent_5p } 0 5 {A15R:A -> A14R:C: adjacent_3p } 0 6 {A14R:C -> A16R:C: upward } 0 7 {A16R:C -> A14R:C: downward } 0 8 {A14R:C -> A17R:G: pairing parallel trans 129 Bs/Ww } 0 9 {A17R:G -> A14R:C: pairing parallel trans 129 Ww/Bs } 0 10 {A15R:A -> A16R:C: adjacent_5p } 0 11 {A16R:C -> A15R:A: adjacent_3p } 0 12 {A16R:C -> A17R:G: adjacent_5p } 0 13 {A17R:G -> A16R:C: adjacent_3p } 0 14 {A17R:G -> A18R:G: adjacent_5p } 0 15 {A18R:G -> A17R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 . 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . 9 . 13 . 14 5 3 . . . 15 . MOLECULE: [GraphModel] [Vertices] 0 C9R:C 0 1 C10R:G 0 2 C11R:A 0 3 C12R:A 0 4 C13R:A 0 5 C14R:G 0 [Edges] 0 {C9R:C -> C10R:G: adjacent_5p upward } 0 1 {C10R:G -> C9R:C: adjacent_3p downward } 0 2 {C9R:C -> C14R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {C14R:G -> C9R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {C10R:G -> C11R:A: adjacent_5p } 0 5 {C11R:A -> C10R:G: adjacent_3p } 0 6 {C10R:G -> C13R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {C13R:A -> C10R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {C10R:G -> C14R:G: outward } 0 9 {C14R:G -> C10R:G: outward } 0 10 {C11R:A -> C12R:A: adjacent_5p upward } 0 11 {C12R:A -> C11R:A: adjacent_3p downward } 0 12 {C12R:A -> C13R:A: adjacent_5p upward } 0 13 {C13R:A -> C12R:A: adjacent_3p downward } 0 14 {C13R:A -> C14R:G: adjacent_5p } 0 15 {C14R:G -> C13R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 D9R:C 0 1 D10R:G 0 2 D11R:A 0 3 D12R:A 0 4 D13R:A 0 5 D14R:G 0 [Edges] 0 {D9R:C -> D10R:G: adjacent_5p upward } 0 1 {D10R:G -> D9R:C: adjacent_3p downward } 0 2 {D9R:C -> D14R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {D14R:G -> D9R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {D10R:G -> D11R:A: adjacent_5p } 0 5 {D11R:A -> D10R:G: adjacent_3p } 0 6 {D10R:G -> D13R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 7 {D13R:A -> D10R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 8 {D10R:G -> D14R:G: outward } 0 9 {D14R:G -> D10R:G: outward } 0 10 {D11R:A -> D12R:A: adjacent_5p upward } 0 11 {D12R:A -> D11R:A: adjacent_3p downward } 0 12 {D12R:A -> D13R:A: adjacent_5p upward } 0 13 {D13R:A -> D12R:A: adjacent_3p downward } 0 14 {D13R:A -> D14R:G: adjacent_5p upward } 0 15 {D14R:G -> D13R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 4R:G 0 1 5R:C 0 2 6R:U 0 3 7R:U 0 4 8R:G 0 5 9R:C 0 [Edges] 0 {4R:G -> 5R:C: adjacent_5p upward } 0 1 {5R:C -> 4R:G: adjacent_3p downward } 0 2 {4R:G -> 6R:U: pairing antiparallel trans one_hbond Sw/Wh } 0 3 {6R:U -> 4R:G: pairing antiparallel trans one_hbond Wh/Sw } 0 4 {4R:G -> 9R:C: pairing antiparallel cis XIX Ww/Ww } 0 5 {9R:C -> 4R:G: pairing antiparallel cis XIX Ww/Ww } 0 6 {5R:C -> 6R:U: adjacent_5p } 0 7 {6R:U -> 5R:C: adjacent_3p } 0 8 {5R:C -> 8R:G: pairing antiparallel cis XIX Ww/Ww } 0 9 {8R:G -> 5R:C: pairing antiparallel cis XIX Ww/Ww } 0 10 {6R:U -> 7R:U: adjacent_5p } 0 11 {7R:U -> 6R:U: adjacent_3p } 0 12 {6R:U -> 9R:C: pairing antiparallel cis one_hbond 106 Ww/Bs } 0 13 {9R:C -> 6R:U: pairing antiparallel cis one_hbond 106 Bs/Ww } 0 14 {7R:U -> 8R:G: adjacent_5p upward } 0 15 {8R:G -> 7R:U: adjacent_3p downward } 0 16 {8R:G -> 9R:C: adjacent_5p } 0 17 {9R:C -> 8R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 2 . . 4 1 1 . 6 . 8 . 2 3 7 . 10 . 12 3 . . 11 . 14 . 4 . 9 . 15 . 16 5 5 . 13 . 17 . MOLECULE: [GraphModel] [Vertices] 0 A5R:U 0 1 A6R:C 0 2 A7R:A 0 3 A8R:C 0 4 A9R:G 0 5 A10R:G 0 [Edges] 0 {A5R:U -> A6R:C: adjacent_5p upward } 0 1 {A6R:C -> A5R:U: adjacent_3p downward } 0 2 {A5R:U -> A10R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {A10R:G -> A5R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {A6R:C -> A7R:A: adjacent_5p } 0 5 {A7R:A -> A6R:C: adjacent_3p } 0 6 {A7R:A -> A8R:C: adjacent_5p } 0 7 {A8R:C -> A7R:A: adjacent_3p } 0 8 {A8R:C -> A9R:G: adjacent_5p } 0 9 {A9R:G -> A8R:C: adjacent_3p } 0 10 {A9R:G -> A10R:G: adjacent_5p outward } 0 11 {A10R:G -> A9R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A916R:U 0 1 A917R:U 0 2 A918R:U 0 3 A919R:G 0 4 A920R:U 0 5 A921R:A 0 [Edges] 0 {A916R:U -> A917R:U: adjacent_5p upward } 0 1 {A917R:U -> A916R:U: adjacent_3p downward } 0 2 {A916R:U -> A921R:A: pairing antiparallel cis XX Ww/Ww } 0 3 {A921R:A -> A916R:U: pairing antiparallel cis XX Ww/Ww } 0 4 {A917R:U -> A918R:U: adjacent_5p } 0 5 {A918R:U -> A917R:U: adjacent_3p } 0 6 {A918R:U -> A919R:G: adjacent_5p } 0 7 {A919R:G -> A918R:U: adjacent_3p } 0 8 {A919R:G -> A920R:U: adjacent_5p } 0 9 {A920R:U -> A919R:G: adjacent_3p } 0 10 {A920R:U -> A921R:A: adjacent_5p } 0 11 {A921R:A -> A920R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 14R:A 0 1 15R:A 0 2 16R:G 0 3 17R:U 0 4 18R:U 0 5 19R:U 0 [Edges] 0 {14R:A -> 15R:A: adjacent_5p upward } 0 1 {15R:A -> 14R:A: adjacent_3p downward } 0 2 {14R:A -> 19R:U: pairing antiparallel cis XX Ww/Ww } 0 3 {19R:U -> 14R:A: pairing antiparallel cis XX Ww/Ww } 0 4 {15R:A -> 16R:G: adjacent_5p } 0 5 {16R:G -> 15R:A: adjacent_3p } 0 6 {16R:G -> 17R:U: adjacent_5p } 0 7 {17R:U -> 16R:G: adjacent_3p } 0 8 {17R:U -> 18R:U: adjacent_5p } 0 9 {18R:U -> 17R:U: adjacent_3p } 0 10 {18R:U -> 19R:U: adjacent_5p } 0 11 {19R:U -> 18R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A14R:C 0 1 A15R:A 0 2 A16R:G 0 3 A17R:A 0 4 A18R:A 0 5 A19R:G 0 [Edges] 0 {A14R:C -> A15R:A: adjacent_5p upward } 0 1 {A15R:A -> A14R:C: adjacent_3p downward } 0 2 {A14R:C -> A19R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A19R:G -> A14R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A15R:A -> A16R:G: adjacent_5p inward } 0 5 {A16R:G -> A15R:A: adjacent_3p inward } 0 6 {A16R:G -> A17R:A: adjacent_5p } 0 7 {A17R:A -> A16R:G: adjacent_3p } 0 8 {A17R:A -> A18R:A: adjacent_5p } 0 9 {A18R:A -> A17R:A: adjacent_3p } 0 10 {A18R:A -> A19R:G: adjacent_5p upward } 0 11 {A19R:G -> A18R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A13R:C 0 1 A14R:G 0 2 A15R:U 0 3 A16R:A 0 4 A17R:A 0 5 A18R:G 0 [Edges] 0 {A13R:C -> A14R:G: adjacent_5p upward } 0 1 {A14R:G -> A13R:C: adjacent_3p downward } 0 2 {A13R:C -> A18R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A18R:G -> A13R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A14R:G -> A15R:U: adjacent_5p } 0 5 {A15R:U -> A14R:G: adjacent_3p } 0 6 {A14R:G -> A17R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A17R:A -> A14R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A15R:U -> A16R:A: adjacent_5p } 0 9 {A16R:A -> A15R:U: adjacent_3p } 0 10 {A16R:A -> A17R:A: adjacent_5p upward } 0 11 {A17R:A -> A16R:A: adjacent_3p downward } 0 12 {A17R:A -> A18R:G: adjacent_5p upward } 0 13 {A18R:G -> A17R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 10R:C 0 1 11R:U 0 2 12R:U 0 3 13R:C 0 4 14R:G 0 5 15R:G 0 [Edges] 0 {10R:C -> 11R:U: adjacent_5p upward } 0 1 {11R:U -> 10R:C: adjacent_3p downward } 0 2 {10R:C -> 15R:G: pairing antiparallel cis Ww/Ww } 0 3 {15R:G -> 10R:C: pairing antiparallel cis Ww/Ww } 0 4 {11R:U -> 12R:U: adjacent_5p } 0 5 {12R:U -> 11R:U: adjacent_3p } 0 6 {11R:U -> 14R:G: pairing parallel trans one_hbond Bs/Ww } 0 7 {14R:G -> 11R:U: pairing parallel trans one_hbond Ww/Bs } 0 8 {12R:U -> 13R:C: adjacent_5p upward } 0 9 {13R:C -> 12R:U: adjacent_3p downward } 0 10 {13R:C -> 14R:G: adjacent_5p } 0 11 {14R:G -> 13R:C: adjacent_3p } 0 12 {14R:G -> 15R:G: adjacent_5p outward } 0 13 {15R:G -> 14R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 11R:U 0 1 12R:U 0 2 13R:A 0 3 14R:G 0 4 15R:C 0 5 16R:U 0 [Edges] 0 {11R:U -> 12R:U: adjacent_5p upward } 0 1 {12R:U -> 11R:U: adjacent_3p downward } 0 2 {11R:U -> 16R:U: pairing antiparallel cis XVI Ws/Ww } 0 3 {16R:U -> 11R:U: pairing antiparallel cis XVI Ww/Ws } 0 4 {12R:U -> 13R:A: adjacent_5p } 0 5 {13R:A -> 12R:U: adjacent_3p } 0 6 {13R:A -> 14R:G: adjacent_5p upward } 0 7 {14R:G -> 13R:A: adjacent_3p downward } 0 8 {14R:G -> 15R:C: adjacent_5p } 0 9 {15R:C -> 14R:G: adjacent_3p } 0 10 {15R:C -> 16R:U: adjacent_5p } 0 11 {16R:U -> 15R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A18R:U 0 1 A19R:U 0 2 A20R:A 0 3 A21R:C 0 4 A22R:G 0 5 A23R:G 0 [Edges] 0 {A18R:U -> A19R:U: adjacent_5p } 0 1 {A19R:U -> A18R:U: adjacent_3p } 0 2 {A18R:U -> A23R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {A23R:G -> A18R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {A19R:U -> A20R:A: adjacent_5p } 0 5 {A20R:A -> A19R:U: adjacent_3p } 0 6 {A19R:U -> A21R:C: upward } 0 7 {A21R:C -> A19R:U: downward } 0 8 {A19R:U -> A22R:G: pairing parallel trans 87 Bs/Ww } 0 9 {A22R:G -> A19R:U: pairing parallel trans 87 Ww/Bs } 0 10 {A20R:A -> A21R:C: adjacent_5p } 0 11 {A21R:C -> A20R:A: adjacent_3p } 0 12 {A21R:C -> A22R:G: adjacent_5p } 0 13 {A22R:G -> A21R:C: adjacent_3p } 0 14 {A22R:G -> A23R:G: adjacent_5p } 0 15 {A23R:G -> A22R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 8 . 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . 9 . 13 . 14 5 3 . . . 15 . MOLECULE: [GraphModel] [Vertices] 0 8R:G 0 1 9R:U 0 2 10R:A 0 3 11R:A 0 4 12R:C 0 5 13R:A 0 [Edges] 0 {8R:G -> 9R:U: adjacent_5p } 0 1 {9R:U -> 8R:G: adjacent_3p } 0 2 {8R:G -> 13R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 3 {13R:A -> 8R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 4 {9R:U -> 10R:A: adjacent_5p } 0 5 {10R:A -> 9R:U: adjacent_3p } 0 6 {10R:A -> 11R:A: adjacent_5p upward } 0 7 {11R:A -> 10R:A: adjacent_3p downward } 0 8 {11R:A -> 12R:C: adjacent_5p upward } 0 9 {12R:C -> 11R:A: adjacent_3p downward } 0 10 {12R:C -> 13R:A: adjacent_5p upward } 0 11 {13R:A -> 12R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A17R:C 0 1 A18R:G 0 2 A19R:A 0 3 A20R:G 0 4 A21R:A 0 5 A22R:G 0 [Edges] 0 {A17R:C -> A18R:G: adjacent_5p upward } 0 1 {A18R:G -> A17R:C: adjacent_3p downward } 0 2 {A17R:C -> A22R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A22R:G -> A17R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A18R:G -> A19R:A: adjacent_5p } 0 5 {A19R:A -> A18R:G: adjacent_3p } 0 6 {A18R:G -> A21R:A: pairing antiparallel trans one_hbond Ww/Hh } 0 7 {A21R:A -> A18R:G: pairing antiparallel trans one_hbond Hh/Ww } 0 8 {A19R:A -> A20R:G: adjacent_5p upward } 0 9 {A20R:G -> A19R:A: adjacent_3p downward } 0 10 {A20R:G -> A21R:A: adjacent_5p upward } 0 11 {A21R:A -> A20R:G: adjacent_3p downward } 0 12 {A21R:A -> A22R:G: adjacent_5p upward } 0 13 {A22R:G -> A21R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 B288R:U 0 1 B289R:G 0 2 B290R:A 0 3 B291R:G 0 4 B292R:A 0 5 B293R:A 0 [Edges] 0 {B288R:U -> B289R:G: adjacent_5p upward } 0 1 {B289R:G -> B288R:U: adjacent_3p downward } 0 2 {B288R:U -> B293R:A: pairing antiparallel cis XX Ww/Ww } 0 3 {B293R:A -> B288R:U: pairing antiparallel cis XX Ww/Ww } 0 4 {B289R:G -> B290R:A: adjacent_5p } 0 5 {B290R:A -> B289R:G: adjacent_3p } 0 6 {B289R:G -> B292R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {B292R:A -> B289R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {B290R:A -> B291R:G: adjacent_5p upward } 0 9 {B291R:G -> B290R:A: adjacent_3p downward } 0 10 {B291R:G -> B292R:A: adjacent_5p upward } 0 11 {B292R:A -> B291R:G: adjacent_3p downward } 0 12 {B292R:A -> B293R:A: adjacent_5p upward } 0 13 {B293R:A -> B292R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 B328R:U 0 1 B329R:G 0 2 B330R:U 0 3 B331R:G 0 4 B332R:A 0 5 B333R:A 0 [Edges] 0 {B328R:U -> B329R:G: adjacent_5p upward } 0 1 {B329R:G -> B328R:U: adjacent_3p downward } 0 2 {B328R:U -> B333R:A: pairing antiparallel cis XX Ww/Ww } 0 3 {B333R:A -> B328R:U: pairing antiparallel cis XX Ww/Ww } 0 4 {B329R:G -> B330R:U: adjacent_5p } 0 5 {B330R:U -> B329R:G: adjacent_3p } 0 6 {B330R:U -> B331R:G: adjacent_5p } 0 7 {B331R:G -> B330R:U: adjacent_3p } 0 8 {B331R:G -> B332R:A: adjacent_5p upward } 0 9 {B332R:A -> B331R:G: adjacent_3p downward } 0 10 {B332R:A -> B333R:A: adjacent_5p upward } 0 11 {B333R:A -> B332R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 B362R:A 0 1 B363R:G 0 2 B364R:A 0 3 B365R:G 0 4 B366R:G 0 5 B367R:U 0 [Edges] 0 {B362R:A -> B363R:G: adjacent_5p upward } 0 1 {B363R:G -> B362R:A: adjacent_3p downward } 0 2 {B362R:A -> B367R:U: pairing antiparallel cis XX Ww/Ww } 0 3 {B367R:U -> B362R:A: pairing antiparallel cis XX Ww/Ww } 0 4 {B363R:G -> B364R:A: adjacent_5p } 0 5 {B364R:A -> B363R:G: adjacent_3p } 0 6 {B364R:A -> B365R:G: adjacent_5p } 0 7 {B365R:G -> B364R:A: adjacent_3p } 0 8 {B365R:G -> B366R:G: adjacent_5p } 0 9 {B366R:G -> B365R:G: adjacent_3p } 0 10 {B366R:G -> B367R:U: adjacent_5p pairing parallel cis one_hbond 89 Sw/Hw } 0 11 {B367R:U -> B366R:G: adjacent_3p pairing parallel cis one_hbond 89 Hw/Sw } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A99R:G 0 1 A100R:G 0 2 A101R:U 0 3 A102R:A 0 4 A103R:A 0 5 A104R:C 0 [Edges] 0 {A99R:G -> A100R:G: adjacent_5p upward } 0 1 {A100R:G -> A99R:G: adjacent_3p downward } 0 2 {A99R:G -> A104R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A104R:C -> A99R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A100R:G -> A101R:U: adjacent_5p } 0 5 {A101R:U -> A100R:G: adjacent_3p } 0 6 {A101R:U -> A102R:A: adjacent_5p upward } 0 7 {A102R:A -> A101R:U: adjacent_3p downward } 0 8 {A102R:A -> A103R:A: adjacent_5p upward } 0 9 {A103R:A -> A102R:A: adjacent_3p downward } 0 10 {A103R:A -> A104R:C: adjacent_5p } 0 11 {A104R:C -> A103R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A182R:G 0 1 A183R:U 0 2 A184R:A 0 3 A185R:A 0 4 A186R:G 0 5 A187R:A 0 [Edges] 0 {A182R:G -> A183R:U: adjacent_5p upward } 0 1 {A183R:U -> A182R:G: adjacent_3p downward } 0 2 {A182R:G -> A187R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A187R:A -> A182R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A183R:U -> A184R:A: adjacent_5p } 0 5 {A184R:A -> A183R:U: adjacent_3p } 0 6 {A184R:A -> A185R:A: adjacent_5p upward } 0 7 {A185R:A -> A184R:A: adjacent_3p downward } 0 8 {A185R:A -> A186R:G: adjacent_5p upward } 0 9 {A186R:G -> A185R:A: adjacent_3p downward } 0 10 {A186R:G -> A187R:A: adjacent_5p upward } 0 11 {A187R:A -> A186R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A204R:G 0 1 A205R:G 0 2 A206R:C 0 3 A207R:A 0 4 A208R:A 0 5 A209R:C 0 [Edges] 0 {A204R:G -> A205R:G: adjacent_5p upward } 0 1 {A205R:G -> A204R:G: adjacent_3p downward } 0 2 {A204R:G -> A209R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A209R:C -> A204R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A205R:G -> A206R:C: adjacent_5p } 0 5 {A206R:C -> A205R:G: adjacent_3p } 0 6 {A206R:C -> A207R:A: adjacent_5p upward } 0 7 {A207R:A -> A206R:C: adjacent_3p downward } 0 8 {A207R:A -> A208R:A: adjacent_5p upward } 0 9 {A208R:A -> A207R:A: adjacent_3p downward } 0 10 {A208R:A -> A209R:C: adjacent_5p } 0 11 {A209R:C -> A208R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A14R:C 0 1 A15R:U 0 2 A16R:U 0 3 A17R:C 0 4 A18R:G 0 5 A19R:G 0 [Edges] 0 {A14R:C -> A15R:U: adjacent_5p upward } 0 1 {A15R:U -> A14R:C: adjacent_3p downward } 0 2 {A14R:C -> A19R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A19R:G -> A14R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A15R:U -> A16R:U: adjacent_5p } 0 5 {A16R:U -> A15R:U: adjacent_3p } 0 6 {A15R:U -> A18R:G: pairing parallel trans one_hbond Ws/Ww } 0 7 {A18R:G -> A15R:U: pairing parallel trans one_hbond Ww/Ws } 0 8 {A16R:U -> A17R:C: adjacent_5p } 0 9 {A17R:C -> A16R:U: adjacent_3p } 0 10 {A17R:C -> A18R:G: adjacent_5p } 0 11 {A18R:G -> A17R:C: adjacent_3p } 0 12 {A18R:G -> A19R:G: adjacent_5p outward } 0 13 {A19R:G -> A18R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 8R:G 0 1 9R:U 0 2 10R:U 0 3 11R:U 0 4 12R:C 0 5 13R:G 0 [Edges] 0 {8R:G -> 9R:U: adjacent_5p } 0 1 {9R:U -> 8R:G: adjacent_3p } 0 2 {8R:G -> 13R:G: pairing antiparallel trans one_hbond 112 Hw/Sw } 0 3 {13R:G -> 8R:G: pairing antiparallel trans one_hbond 112 Sw/Hw } 0 4 {9R:U -> 10R:U: adjacent_5p } 0 5 {10R:U -> 9R:U: adjacent_3p } 0 6 {10R:U -> 11R:U: adjacent_5p } 0 7 {11R:U -> 10R:U: adjacent_3p } 0 8 {11R:U -> 12R:C: adjacent_5p } 0 9 {12R:C -> 11R:U: adjacent_3p } 0 10 {12R:C -> 13R:G: adjacent_5p } 0 11 {13R:G -> 12R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 '0'165R:A 0 1 '0'166R:A 0 2 '0'167R:A 0 3 '0'168R:C 0 4 '0'169R:A 0 5 '0'170R:U 0 [Edges] 0 {'0'165R:A -> '0'166R:A: adjacent_5p } 0 1 {'0'166R:A -> '0'165R:A: adjacent_3p } 0 2 {'0'165R:A -> '0'168R:C: inward } 0 3 {'0'168R:C -> '0'165R:A: inward } 0 4 {'0'165R:A -> '0'170R:U: pairing antiparallel trans one_hbond Bs/Hw } 0 5 {'0'170R:U -> '0'165R:A: pairing antiparallel trans one_hbond Hw/Bs } 0 6 {'0'166R:A -> '0'167R:A: adjacent_5p } 0 7 {'0'167R:A -> '0'166R:A: adjacent_3p } 0 8 {'0'167R:A -> '0'168R:C: adjacent_5p upward } 0 9 {'0'168R:C -> '0'167R:A: adjacent_3p downward } 0 10 {'0'168R:C -> '0'169R:A: adjacent_5p } 0 11 {'0'169R:A -> '0'168R:C: adjacent_3p } 0 12 {'0'169R:A -> '0'170R:U: adjacent_5p } 0 13 {'0'170R:U -> '0'169R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . 2 . 4 1 1 . 6 . . . 2 . 7 . 8 . . 3 3 . 9 . 10 . 4 . . . 11 . 12 5 5 . . . 13 . [GraphModel] [Vertices] 0 '0'252R:C 0 1 '0'253R:U 0 2 '0'254R:C 0 3 '0'255R:A 0 4 '0'256R:C 0 5 '0'257R:G 0 [Edges] 0 {'0'252R:C -> '0'253R:U: adjacent_5p upward } 0 1 {'0'253R:U -> '0'252R:C: adjacent_3p downward } 0 2 {'0'252R:C -> '0'257R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'257R:G -> '0'252R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'253R:U -> '0'254R:C: adjacent_5p } 0 5 {'0'254R:C -> '0'253R:U: adjacent_3p } 0 6 {'0'253R:U -> '0'256R:C: pairing antiparallel trans one_hbond 97 Ss/Hw } 0 7 {'0'256R:C -> '0'253R:U: pairing antiparallel trans one_hbond 97 Hw/Ss } 0 8 {'0'254R:C -> '0'255R:A: adjacent_5p upward } 0 9 {'0'255R:A -> '0'254R:C: adjacent_3p downward } 0 10 {'0'255R:A -> '0'256R:C: adjacent_5p upward } 0 11 {'0'256R:C -> '0'255R:A: adjacent_3p downward } 0 12 {'0'256R:C -> '0'257R:G: adjacent_5p upward } 0 13 {'0'257R:G -> '0'256R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 '0'455R:A 0 1 '0'456R:G 0 2 '0'457R:U 0 3 '0'458R:G 0 4 '0'459R:A 0 5 '0'460R:A 0 [Edges] 0 {'0'455R:A -> '0'456R:G: adjacent_5p upward } 0 1 {'0'456R:G -> '0'455R:A: adjacent_3p downward } 0 2 {'0'455R:A -> '0'460R:A: pairing antiparallel trans V Ww/Hh } 0 3 {'0'460R:A -> '0'455R:A: pairing antiparallel trans V Hh/Ww } 0 4 {'0'456R:G -> '0'457R:U: adjacent_5p } 0 5 {'0'457R:U -> '0'456R:G: adjacent_3p } 0 6 {'0'457R:U -> '0'458R:G: adjacent_5p } 0 7 {'0'458R:G -> '0'457R:U: adjacent_3p } 0 8 {'0'457R:U -> '0'459R:A: inward } 0 9 {'0'459R:A -> '0'457R:U: inward } 0 10 {'0'458R:G -> '0'459R:A: adjacent_5p upward } 0 11 {'0'459R:A -> '0'458R:G: adjacent_3p downward } 0 12 {'0'459R:A -> '0'460R:A: adjacent_5p } 0 13 {'0'460R:A -> '0'459R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 8 . 3 . . 7 . 10 . 4 . . 9 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 '0'458R:G 0 1 '0'459R:A 0 2 '0'460R:A 0 3 '0'461R:C 0 4 '0'462R:A 0 5 '0'463R:A 0 [Edges] 0 {'0'458R:G -> '0'459R:A: adjacent_5p upward } 0 1 {'0'459R:A -> '0'458R:G: adjacent_3p downward } 0 2 {'0'458R:G -> '0'463R:A: pairing parallel trans 57 Ss/Ss } 0 3 {'0'463R:A -> '0'458R:G: pairing parallel trans 57 Ss/Ss } 0 4 {'0'459R:A -> '0'460R:A: adjacent_5p } 0 5 {'0'460R:A -> '0'459R:A: adjacent_3p } 0 6 {'0'460R:A -> '0'461R:C: adjacent_5p } 0 7 {'0'461R:C -> '0'460R:A: adjacent_3p } 0 8 {'0'461R:C -> '0'462R:A: adjacent_5p } 0 9 {'0'462R:A -> '0'461R:C: adjacent_3p } 0 10 {'0'462R:A -> '0'463R:A: adjacent_5p } 0 11 {'0'463R:A -> '0'462R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'468R:U 0 1 '0'469R:G 0 2 '0'470R:U 0 3 '0'471R:G 0 4 '0'472R:A 0 5 '0'473R:A 0 [Edges] 0 {'0'468R:U -> '0'469R:G: adjacent_5p upward } 0 1 {'0'469R:G -> '0'468R:U: adjacent_3p downward } 0 2 {'0'468R:U -> '0'473R:A: pairing antiparallel cis XX Ww/Ww } 0 3 {'0'473R:A -> '0'468R:U: pairing antiparallel cis XX Ww/Ww } 0 4 {'0'469R:G -> '0'470R:U: adjacent_5p } 0 5 {'0'470R:U -> '0'469R:G: adjacent_3p } 0 6 {'0'469R:G -> '0'472R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'0'472R:A -> '0'469R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'0'469R:G -> '0'473R:A: outward } 0 9 {'0'473R:A -> '0'469R:G: outward } 0 10 {'0'470R:U -> '0'471R:G: adjacent_5p upward } 0 11 {'0'471R:G -> '0'470R:U: adjacent_3p downward } 0 12 {'0'471R:G -> '0'472R:A: adjacent_5p upward } 0 13 {'0'472R:A -> '0'471R:G: adjacent_3p downward } 0 14 {'0'472R:A -> '0'473R:A: adjacent_5p } 0 15 {'0'473R:A -> '0'472R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 '0'506R:G 0 1 '0'507R:A 0 2 '0'508R:A 0 3 '0'509R:A 0 4 '0'510R:U 0 5 '0'511R:A 0 [Edges] 0 {'0'506R:G -> '0'507R:A: adjacent_5p } 0 1 {'0'507R:A -> '0'506R:G: adjacent_3p } 0 2 {'0'506R:G -> '0'511R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 3 {'0'511R:A -> '0'506R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 4 {'0'507R:A -> '0'508R:A: adjacent_5p upward } 0 5 {'0'508R:A -> '0'507R:A: adjacent_3p downward } 0 6 {'0'508R:A -> '0'509R:A: adjacent_5p } 0 7 {'0'509R:A -> '0'508R:A: adjacent_3p } 0 8 {'0'508R:A -> '0'511R:A: upward } 0 9 {'0'511R:A -> '0'508R:A: downward } 0 10 {'0'509R:A -> '0'510R:U: adjacent_5p } 0 11 {'0'510R:U -> '0'509R:A: adjacent_3p } 0 12 {'0'509R:A -> '0'511R:A: downward } 0 13 {'0'511R:A -> '0'509R:A: upward } 0 14 {'0'510R:U -> '0'511R:A: adjacent_5p } 0 15 {'0'511R:A -> '0'510R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . 8 3 . . 7 . 10 12 4 . . . 11 . 14 5 3 . 9 13 15 . [GraphModel] [Vertices] 0 '0'576R:C 0 1 '0'577R:G 0 2 '0'578R:C 0 3 '0'579R:G 0 4 '0'580R:A 0 5 '0'581R:G 0 [Edges] 0 {'0'576R:C -> '0'577R:G: adjacent_5p upward } 0 1 {'0'577R:G -> '0'576R:C: adjacent_3p downward } 0 2 {'0'576R:C -> '0'581R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'581R:G -> '0'576R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'577R:G -> '0'578R:C: adjacent_5p } 0 5 {'0'578R:C -> '0'577R:G: adjacent_3p } 0 6 {'0'577R:G -> '0'581R:G: outward } 0 7 {'0'581R:G -> '0'577R:G: outward } 0 8 {'0'578R:C -> '0'579R:G: adjacent_5p upward } 0 9 {'0'579R:G -> '0'578R:C: adjacent_3p downward } 0 10 {'0'579R:G -> '0'580R:A: adjacent_5p upward } 0 11 {'0'580R:A -> '0'579R:G: adjacent_3p downward } 0 12 {'0'580R:A -> '0'581R:G: adjacent_5p } 0 13 {'0'581R:G -> '0'580R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . [GraphModel] [Vertices] 0 '0'690R:G 0 1 '0'691R:G 0 2 '0'692R:A 0 3 '0'693R:A 0 4 '0'694R:A 0 5 '0'695R:C 0 [Edges] 0 {'0'690R:G -> '0'691R:G: adjacent_5p upward } 0 1 {'0'691R:G -> '0'690R:G: adjacent_3p downward } 0 2 {'0'690R:G -> '0'695R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'695R:C -> '0'690R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'691R:G -> '0'692R:A: adjacent_5p } 0 5 {'0'692R:A -> '0'691R:G: adjacent_3p } 0 6 {'0'691R:G -> '0'694R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'0'694R:A -> '0'691R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'0'692R:A -> '0'693R:A: adjacent_5p upward } 0 9 {'0'693R:A -> '0'692R:A: adjacent_3p downward } 0 10 {'0'693R:A -> '0'694R:A: adjacent_5p upward } 0 11 {'0'694R:A -> '0'693R:A: adjacent_3p downward } 0 12 {'0'694R:A -> '0'695R:C: adjacent_5p } 0 13 {'0'695R:C -> '0'694R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 '0'733R:U 0 1 '0'734R:U 0 2 '0'735R:C 0 3 '0'736R:A 0 4 '0'737R:A 0 5 '0'738R:G 0 [Edges] 0 {'0'733R:U -> '0'734R:U: adjacent_5p upward } 0 1 {'0'734R:U -> '0'733R:U: adjacent_3p downward } 0 2 {'0'733R:U -> '0'738R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {'0'738R:G -> '0'733R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {'0'734R:U -> '0'735R:C: adjacent_5p } 0 5 {'0'735R:C -> '0'734R:U: adjacent_3p } 0 6 {'0'735R:C -> '0'736R:A: adjacent_5p upward } 0 7 {'0'736R:A -> '0'735R:C: adjacent_3p downward } 0 8 {'0'736R:A -> '0'737R:A: adjacent_5p upward } 0 9 {'0'737R:A -> '0'736R:A: adjacent_3p downward } 0 10 {'0'737R:A -> '0'738R:G: adjacent_5p upward } 0 11 {'0'738R:G -> '0'737R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'804R:C 0 1 '0'805R:G 0 2 '0'806R:A 0 3 '0'807R:A 0 4 '0'808R:A 0 5 '0'809R:G 0 [Edges] 0 {'0'804R:C -> '0'805R:G: adjacent_5p upward } 0 1 {'0'805R:G -> '0'804R:C: adjacent_3p downward } 0 2 {'0'804R:C -> '0'809R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'809R:G -> '0'804R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'805R:G -> '0'806R:A: adjacent_5p } 0 5 {'0'806R:A -> '0'805R:G: adjacent_3p } 0 6 {'0'805R:G -> '0'808R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'0'808R:A -> '0'805R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'0'805R:G -> '0'809R:G: outward } 0 9 {'0'809R:G -> '0'805R:G: outward } 0 10 {'0'806R:A -> '0'807R:A: adjacent_5p upward } 0 11 {'0'807R:A -> '0'806R:A: adjacent_3p downward } 0 12 {'0'807R:A -> '0'808R:A: adjacent_5p upward } 0 13 {'0'808R:A -> '0'807R:A: adjacent_3p downward } 0 14 {'0'808R:A -> '0'809R:G: adjacent_5p } 0 15 {'0'809R:G -> '0'808R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 '0'838R:C 0 1 '0'839R:C 0 2 '0'840R:U 0 3 '0'841R:A 0 4 '0'842R:C 0 5 '0'843R:A 0 [Edges] 0 {'0'838R:C -> '0'839R:C: adjacent_5p upward } 0 1 {'0'839R:C -> '0'838R:C: adjacent_3p downward } 0 2 {'0'838R:C -> '0'843R:A: pairing parallel trans one_hbond 76 Ss/Wh } 0 3 {'0'843R:A -> '0'838R:C: pairing parallel trans one_hbond 76 Wh/Ss } 0 4 {'0'839R:C -> '0'840R:U: adjacent_5p } 0 5 {'0'840R:U -> '0'839R:C: adjacent_3p } 0 6 {'0'840R:U -> '0'841R:A: adjacent_5p } 0 7 {'0'841R:A -> '0'840R:U: adjacent_3p } 0 8 {'0'841R:A -> '0'842R:C: adjacent_5p } 0 9 {'0'842R:C -> '0'841R:A: adjacent_3p } 0 10 {'0'841R:A -> '0'843R:A: inward } 0 11 {'0'843R:A -> '0'841R:A: inward } 0 12 {'0'842R:C -> '0'843R:A: adjacent_5p upward } 0 13 {'0'843R:A -> '0'842R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 10 4 . . . 9 . 12 5 3 . . 11 13 . [GraphModel] [Vertices] 0 '0'919R:U 0 1 '0'920R:C 0 2 '0'921R:G 0 3 '0'922R:A 0 4 '0'923R:A 0 5 '0'924R:G 0 [Edges] 0 {'0'919R:U -> '0'920R:C: adjacent_5p } 0 1 {'0'920R:C -> '0'919R:U: adjacent_3p } 0 2 {'0'919R:U -> '0'924R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {'0'924R:G -> '0'919R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {'0'920R:C -> '0'921R:G: adjacent_5p } 0 5 {'0'921R:G -> '0'920R:C: adjacent_3p } 0 6 {'0'921R:G -> '0'922R:A: adjacent_5p outward } 0 7 {'0'922R:A -> '0'921R:G: adjacent_3p outward } 0 8 {'0'922R:A -> '0'923R:A: adjacent_5p } 0 9 {'0'923R:A -> '0'922R:A: adjacent_3p } 0 10 {'0'923R:A -> '0'924R:G: adjacent_5p } 0 11 {'0'924R:G -> '0'923R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'1197R:G 0 1 '0'1198R:U 0 2 '0'1199R:A 0 3 '0'1200R:A 0 4 '0'1201R:C 0 5 '0'1202R:A 0 [Edges] 0 {'0'1197R:G -> '0'1198R:U: adjacent_5p upward } 0 1 {'0'1198R:U -> '0'1197R:G: adjacent_3p downward } 0 2 {'0'1197R:G -> '0'1202R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {'0'1202R:A -> '0'1197R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {'0'1198R:U -> '0'1199R:A: adjacent_5p } 0 5 {'0'1199R:A -> '0'1198R:U: adjacent_3p } 0 6 {'0'1199R:A -> '0'1200R:A: adjacent_5p upward } 0 7 {'0'1200R:A -> '0'1199R:A: adjacent_3p downward } 0 8 {'0'1200R:A -> '0'1201R:C: adjacent_5p upward } 0 9 {'0'1201R:C -> '0'1200R:A: adjacent_3p downward } 0 10 {'0'1201R:C -> '0'1202R:A: adjacent_5p upward } 0 11 {'0'1202R:A -> '0'1201R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'1242R:A 0 1 '0'1243R:C 0 2 '0'1244R:U 0 3 '0'1245R:C 0 4 '0'1246R:A 0 5 '0'1247R:A 0 [Edges] 0 {'0'1242R:A -> '0'1243R:C: adjacent_5p upward } 0 1 {'0'1243R:C -> '0'1242R:A: adjacent_3p downward } 0 2 {'0'1242R:A -> '0'1247R:A: pairing parallel trans one_hbond Ss/Bs } 0 3 {'0'1247R:A -> '0'1242R:A: pairing parallel trans one_hbond Bs/Ss } 0 4 {'0'1243R:C -> '0'1244R:U: adjacent_5p } 0 5 {'0'1244R:U -> '0'1243R:C: adjacent_3p } 0 6 {'0'1244R:U -> '0'1245R:C: adjacent_5p } 0 7 {'0'1245R:C -> '0'1244R:U: adjacent_3p } 0 8 {'0'1245R:C -> '0'1246R:A: adjacent_5p } 0 9 {'0'1246R:A -> '0'1245R:C: adjacent_3p } 0 10 {'0'1246R:A -> '0'1247R:A: adjacent_5p } 0 11 {'0'1247R:A -> '0'1246R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'1326R:U 0 1 '0'1327R:G 0 2 '0'1328R:A 0 3 '0'1329R:A 0 4 '0'1330R:A 0 5 '0'1331R:A 0 [Edges] 0 {'0'1326R:U -> '0'1327R:G: adjacent_5p } 0 1 {'0'1327R:G -> '0'1326R:U: adjacent_3p } 0 2 {'0'1326R:U -> '0'1331R:A: pairing antiparallel cis XX Ww/Ww } 0 3 {'0'1331R:A -> '0'1326R:U: pairing antiparallel cis XX Ww/Ww } 0 4 {'0'1327R:G -> '0'1328R:A: adjacent_5p } 0 5 {'0'1328R:A -> '0'1327R:G: adjacent_3p } 0 6 {'0'1327R:G -> '0'1330R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'0'1330R:A -> '0'1327R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'0'1327R:G -> '0'1331R:A: outward } 0 9 {'0'1331R:A -> '0'1327R:G: outward } 0 10 {'0'1328R:A -> '0'1329R:A: adjacent_5p } 0 11 {'0'1329R:A -> '0'1328R:A: adjacent_3p } 0 12 {'0'1329R:A -> '0'1330R:A: adjacent_5p upward } 0 13 {'0'1330R:A -> '0'1329R:A: adjacent_3p downward } 0 14 {'0'1330R:A -> '0'1331R:A: adjacent_5p } 0 15 {'0'1331R:A -> '0'1330R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 '0'1499R:U 0 1 '0'1500R:U 0 2 '0'1501R:A 0 3 '0'1502R:A 0 4 '0'1503R:U 0 5 '0'1504R:A 0 [Edges] 0 {'0'1499R:U -> '0'1500R:U: adjacent_5p } 0 1 {'0'1500R:U -> '0'1499R:U: adjacent_3p } 0 2 {'0'1499R:U -> '0'1504R:A: pairing antiparallel trans XXIV Ws/Hh } 0 3 {'0'1504R:A -> '0'1499R:U: pairing antiparallel trans XXIV Hh/Ws } 0 4 {'0'1500R:U -> '0'1501R:A: adjacent_5p } 0 5 {'0'1501R:A -> '0'1500R:U: adjacent_3p } 0 6 {'0'1501R:A -> '0'1502R:A: adjacent_5p upward } 0 7 {'0'1502R:A -> '0'1501R:A: adjacent_3p downward } 0 8 {'0'1502R:A -> '0'1503R:U: adjacent_5p } 0 9 {'0'1503R:U -> '0'1502R:A: adjacent_3p } 0 10 {'0'1503R:U -> '0'1504R:A: adjacent_5p upward } 0 11 {'0'1504R:A -> '0'1503R:U: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'1628R:G 0 1 '0'1629R:G 0 2 '0'1630R:A 0 3 '0'1631R:A 0 4 '0'1632R:A 0 5 '0'1633R:C 0 [Edges] 0 {'0'1628R:G -> '0'1629R:G: adjacent_5p upward } 0 1 {'0'1629R:G -> '0'1628R:G: adjacent_3p downward } 0 2 {'0'1628R:G -> '0'1633R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'1633R:C -> '0'1628R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'1629R:G -> '0'1630R:A: adjacent_5p } 0 5 {'0'1630R:A -> '0'1629R:G: adjacent_3p } 0 6 {'0'1629R:G -> '0'1632R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'0'1632R:A -> '0'1629R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'0'1630R:A -> '0'1631R:A: adjacent_5p upward } 0 9 {'0'1631R:A -> '0'1630R:A: adjacent_3p downward } 0 10 {'0'1631R:A -> '0'1632R:A: adjacent_5p upward } 0 11 {'0'1632R:A -> '0'1631R:A: adjacent_3p downward } 0 12 {'0'1632R:A -> '0'1633R:C: adjacent_5p } 0 13 {'0'1633R:C -> '0'1632R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 '0'1769R:C 0 1 '0'1770R:U 0 2 '0'1771R:U 0 3 '0'1772R:C 0 4 '0'1773R:G 0 5 '0'1774R:G 0 [Edges] 0 {'0'1769R:C -> '0'1770R:U: adjacent_5p upward } 0 1 {'0'1770R:U -> '0'1769R:C: adjacent_3p downward } 0 2 {'0'1769R:C -> '0'1774R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'1774R:G -> '0'1769R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'1770R:U -> '0'1771R:U: adjacent_5p } 0 5 {'0'1771R:U -> '0'1770R:U: adjacent_3p } 0 6 {'0'1770R:U -> '0'1773R:G: pairing parallel trans one_hbond Ws/Ww } 0 7 {'0'1773R:G -> '0'1770R:U: pairing parallel trans one_hbond Ww/Ws } 0 8 {'0'1771R:U -> '0'1772R:C: adjacent_5p } 0 9 {'0'1772R:C -> '0'1771R:U: adjacent_3p } 0 10 {'0'1772R:C -> '0'1773R:G: adjacent_5p } 0 11 {'0'1773R:G -> '0'1772R:C: adjacent_3p } 0 12 {'0'1773R:G -> '0'1774R:G: adjacent_5p outward } 0 13 {'0'1774R:G -> '0'1773R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 '0'1835R:U 0 1 '0'1836R:A 0 2 '0'1837R:G 0 3 '0'1838R:U 0 4 '0'1839R:A 0 5 '0'1840R:A 0 [Edges] 0 {'0'1835R:U -> '0'1836R:A: adjacent_5p } 0 1 {'0'1836R:A -> '0'1835R:U: adjacent_3p } 0 2 {'0'1835R:U -> '0'1839R:A: inward } 0 3 {'0'1839R:A -> '0'1835R:U: inward } 0 4 {'0'1835R:U -> '0'1840R:A: pairing parallel trans one_hbond Hh/Hh } 0 5 {'0'1840R:A -> '0'1835R:U: pairing parallel trans one_hbond Hh/Hh } 0 6 {'0'1836R:A -> '0'1837R:G: adjacent_5p } 0 7 {'0'1837R:G -> '0'1836R:A: adjacent_3p } 0 8 {'0'1837R:G -> '0'1838R:U: adjacent_5p } 0 9 {'0'1838R:U -> '0'1837R:G: adjacent_3p } 0 10 {'0'1838R:U -> '0'1839R:A: adjacent_5p } 0 11 {'0'1839R:A -> '0'1838R:U: adjacent_3p } 0 12 {'0'1839R:A -> '0'1840R:A: adjacent_5p } 0 13 {'0'1840R:A -> '0'1839R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . 2 4 1 1 . 6 . . . 2 . 7 . 8 . . 3 . . 9 . 10 . 4 3 . . 11 . 12 5 5 . . . 13 . [GraphModel] [Vertices] 0 '0'1862R:C 0 1 '0'1863R:G 0 2 '0'1864R:C 0 3 '0'1865R:A 0 4 '0'1866R:A 0 5 '0'1867R:G 0 [Edges] 0 {'0'1862R:C -> '0'1863R:G: adjacent_5p } 0 1 {'0'1863R:G -> '0'1862R:C: adjacent_3p } 0 2 {'0'1862R:C -> '0'1867R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'1867R:G -> '0'1862R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'1863R:G -> '0'1864R:C: adjacent_5p } 0 5 {'0'1864R:C -> '0'1863R:G: adjacent_3p } 0 6 {'0'1863R:G -> '0'1866R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'0'1866R:A -> '0'1863R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'0'1863R:G -> '0'1867R:G: outward } 0 9 {'0'1867R:G -> '0'1863R:G: outward } 0 10 {'0'1864R:C -> '0'1865R:A: adjacent_5p upward } 0 11 {'0'1865R:A -> '0'1864R:C: adjacent_3p downward } 0 12 {'0'1865R:A -> '0'1866R:A: adjacent_5p upward } 0 13 {'0'1866R:A -> '0'1865R:A: adjacent_3p downward } 0 14 {'0'1866R:A -> '0'1867R:G: adjacent_5p } 0 15 {'0'1867R:G -> '0'1866R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 '0'1917R:G 0 1 '0'1918R:U 0 2 '0'1919R:A 0 3 '0'1920R:C 0 4 '0'1921R:A 0 5 '0'1922R:A 0 [Edges] 0 {'0'1917R:G -> '0'1918R:U: adjacent_5p upward } 0 1 {'0'1918R:U -> '0'1917R:G: adjacent_3p downward } 0 2 {'0'1917R:G -> '0'1922R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'1922R:A -> '0'1917R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'1918R:U -> '0'1919R:A: adjacent_5p } 0 5 {'0'1919R:A -> '0'1918R:U: adjacent_3p } 0 6 {'0'1919R:A -> '0'1920R:C: adjacent_5p } 0 7 {'0'1920R:C -> '0'1919R:A: adjacent_3p } 0 8 {'0'1920R:C -> '0'1921R:A: adjacent_5p upward } 0 9 {'0'1921R:A -> '0'1920R:C: adjacent_3p downward } 0 10 {'0'1921R:A -> '0'1922R:A: adjacent_5p upward } 0 11 {'0'1922R:A -> '0'1921R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'2069R:U 0 1 '0'2070R:G 0 2 '0'2071R:C 0 3 '0'2072R:G 0 4 '0'2073R:G 0 5 '0'2074R:A 0 [Edges] 0 {'0'2069R:U -> '0'2070R:G: adjacent_5p upward } 0 1 {'0'2070R:G -> '0'2069R:U: adjacent_3p downward } 0 2 {'0'2069R:U -> '0'2074R:A: pairing antiparallel trans XXIV Ws/Hh } 0 3 {'0'2074R:A -> '0'2069R:U: pairing antiparallel trans XXIV Hh/Ws } 0 4 {'0'2070R:G -> '0'2071R:C: adjacent_5p } 0 5 {'0'2071R:C -> '0'2070R:G: adjacent_3p } 0 6 {'0'2071R:C -> '0'2072R:G: adjacent_5p } 0 7 {'0'2072R:G -> '0'2071R:C: adjacent_3p } 0 8 {'0'2072R:G -> '0'2073R:G: adjacent_5p } 0 9 {'0'2073R:G -> '0'2072R:G: adjacent_3p } 0 10 {'0'2073R:G -> '0'2074R:A: adjacent_5p } 0 11 {'0'2074R:A -> '0'2073R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'2248R:C 0 1 '0'2249R:G 0 2 '0'2250R:G 0 3 '0'2251R:G 0 4 '0'2252R:A 0 5 '0'2253R:G 0 [Edges] 0 {'0'2248R:C -> '0'2249R:G: adjacent_5p upward } 0 1 {'0'2249R:G -> '0'2248R:C: adjacent_3p downward } 0 2 {'0'2248R:C -> '0'2253R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'2253R:G -> '0'2248R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'2249R:G -> '0'2250R:G: adjacent_5p } 0 5 {'0'2250R:G -> '0'2249R:G: adjacent_3p } 0 6 {'0'2249R:G -> '0'2252R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'0'2252R:A -> '0'2249R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'0'2249R:G -> '0'2253R:G: outward } 0 9 {'0'2253R:G -> '0'2249R:G: outward } 0 10 {'0'2250R:G -> '0'2251R:G: adjacent_5p upward } 0 11 {'0'2251R:G -> '0'2250R:G: adjacent_3p downward } 0 12 {'0'2251R:G -> '0'2252R:A: adjacent_5p upward } 0 13 {'0'2252R:A -> '0'2251R:G: adjacent_3p downward } 0 14 {'0'2252R:A -> '0'2253R:G: adjacent_5p upward } 0 15 {'0'2253R:G -> '0'2252R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 '0'2301R:A 0 1 '0'2302R:A 0 2 '0'2303R:A 0 3 '0'2304R:G 0 4 '0'2305R:A 0 5 '0'2306R:U 0 [Edges] 0 {'0'2301R:A -> '0'2302R:A: adjacent_5p } 0 1 {'0'2302R:A -> '0'2301R:A: adjacent_3p } 0 2 {'0'2301R:A -> '0'2306R:U: pairing parallel trans XXI Ww/Ws } 0 3 {'0'2306R:U -> '0'2301R:A: pairing parallel trans XXI Ws/Ww } 0 4 {'0'2302R:A -> '0'2303R:A: adjacent_5p } 0 5 {'0'2303R:A -> '0'2302R:A: adjacent_3p } 0 6 {'0'2303R:A -> '0'2304R:G: adjacent_5p upward } 0 7 {'0'2304R:G -> '0'2303R:A: adjacent_3p downward } 0 8 {'0'2304R:G -> '0'2305R:A: adjacent_5p upward } 0 9 {'0'2305R:A -> '0'2304R:G: adjacent_3p downward } 0 10 {'0'2305R:A -> '0'2306R:U: adjacent_5p upward } 0 11 {'0'2306R:U -> '0'2305R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'2365R:G 0 1 '0'2366R:C 0 2 '0'2367R:A 0 3 '0'2368R:A 0 4 '0'2369R:A 0 5 '0'2370R:A 0 [Edges] 0 {'0'2365R:G -> '0'2366R:C: adjacent_5p upward } 0 1 {'0'2366R:C -> '0'2365R:G: adjacent_3p downward } 0 2 {'0'2365R:G -> '0'2370R:A: pairing parallel trans 57 Ss/Ss } 0 3 {'0'2370R:A -> '0'2365R:G: pairing parallel trans 57 Ss/Ss } 0 4 {'0'2366R:C -> '0'2367R:A: adjacent_5p } 0 5 {'0'2367R:A -> '0'2366R:C: adjacent_3p } 0 6 {'0'2367R:A -> '0'2368R:A: adjacent_5p } 0 7 {'0'2368R:A -> '0'2367R:A: adjacent_3p } 0 8 {'0'2367R:A -> '0'2369R:A: outward } 0 9 {'0'2369R:A -> '0'2367R:A: outward } 0 10 {'0'2368R:A -> '0'2369R:A: adjacent_5p } 0 11 {'0'2369R:A -> '0'2368R:A: adjacent_3p } 0 12 {'0'2369R:A -> '0'2370R:A: adjacent_5p } 0 13 {'0'2370R:A -> '0'2369R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 8 . 3 . . 7 . 10 . 4 . . 9 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 '0'2411R:C 0 1 '0'2412R:G 0 2 '0'2413R:A 0 3 '0'2414R:A 0 4 '0'2415R:A 0 5 '0'2416R:G 0 [Edges] 0 {'0'2411R:C -> '0'2412R:G: adjacent_5p upward } 0 1 {'0'2412R:G -> '0'2411R:C: adjacent_3p downward } 0 2 {'0'2411R:C -> '0'2416R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'2416R:G -> '0'2411R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'2412R:G -> '0'2413R:A: adjacent_5p } 0 5 {'0'2413R:A -> '0'2412R:G: adjacent_3p } 0 6 {'0'2412R:G -> '0'2415R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'0'2415R:A -> '0'2412R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'0'2412R:G -> '0'2416R:G: outward } 0 9 {'0'2416R:G -> '0'2412R:G: outward } 0 10 {'0'2413R:A -> '0'2414R:A: adjacent_5p upward } 0 11 {'0'2414R:A -> '0'2413R:A: adjacent_3p downward } 0 12 {'0'2414R:A -> '0'2415R:A: adjacent_5p upward } 0 13 {'0'2415R:A -> '0'2414R:A: adjacent_3p downward } 0 14 {'0'2415R:A -> '0'2416R:G: adjacent_5p } 0 15 {'0'2416R:G -> '0'2415R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 '0'2611R:G 0 1 '0'2612R:A 0 2 '0'2613R:G 0 3 '0'2614R:C 0 4 '0'2615R:U 0 5 '0'2616R:G 0 [Edges] 0 {'0'2611R:G -> '0'2612R:A: adjacent_5p } 0 1 {'0'2612R:A -> '0'2611R:G: adjacent_3p } 0 2 {'0'2611R:G -> '0'2616R:G: pairing parallel trans one_hbond C8/Hw } 0 3 {'0'2616R:G -> '0'2611R:G: pairing parallel trans one_hbond Hw/C8 } 0 4 {'0'2612R:A -> '0'2613R:G: adjacent_5p } 0 5 {'0'2613R:G -> '0'2612R:A: adjacent_3p } 0 6 {'0'2613R:G -> '0'2614R:C: adjacent_5p upward } 0 7 {'0'2614R:C -> '0'2613R:G: adjacent_3p downward } 0 8 {'0'2614R:C -> '0'2615R:U: adjacent_5p upward } 0 9 {'0'2615R:U -> '0'2614R:C: adjacent_3p downward } 0 10 {'0'2615R:U -> '0'2616R:G: adjacent_5p inward } 0 11 {'0'2616R:G -> '0'2615R:U: adjacent_3p inward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'2629R:C 0 1 '0'2630R:G 0 2 '0'2631R:U 0 3 '0'2632R:G 0 4 '0'2633R:A 0 5 '0'2634R:G 0 [Edges] 0 {'0'2629R:C -> '0'2630R:G: adjacent_5p upward } 0 1 {'0'2630R:G -> '0'2629R:C: adjacent_3p downward } 0 2 {'0'2629R:C -> '0'2634R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'2634R:G -> '0'2629R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'2630R:G -> '0'2631R:U: adjacent_5p } 0 5 {'0'2631R:U -> '0'2630R:G: adjacent_3p } 0 6 {'0'2630R:G -> '0'2633R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'0'2633R:A -> '0'2630R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'0'2630R:G -> '0'2634R:G: outward } 0 9 {'0'2634R:G -> '0'2630R:G: outward } 0 10 {'0'2631R:U -> '0'2632R:G: adjacent_5p upward } 0 11 {'0'2632R:G -> '0'2631R:U: adjacent_3p downward } 0 12 {'0'2632R:G -> '0'2633R:A: adjacent_5p upward } 0 13 {'0'2633R:A -> '0'2632R:G: adjacent_3p downward } 0 14 {'0'2633R:A -> '0'2634R:G: adjacent_5p } 0 15 {'0'2634R:G -> '0'2633R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 '0'2695R:C 0 1 '0'2696R:G 0 2 '0'2697R:A 0 3 '0'2698R:G 0 4 '0'2699R:A 0 5 '0'2700R:G 0 [Edges] 0 {'0'2695R:C -> '0'2696R:G: adjacent_5p upward } 0 1 {'0'2696R:G -> '0'2695R:C: adjacent_3p downward } 0 2 {'0'2695R:C -> '0'2700R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'2700R:G -> '0'2695R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'2696R:G -> '0'2697R:A: adjacent_5p } 0 5 {'0'2697R:A -> '0'2696R:G: adjacent_3p } 0 6 {'0'2696R:G -> '0'2699R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'0'2699R:A -> '0'2696R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'0'2697R:A -> '0'2698R:G: adjacent_5p upward } 0 9 {'0'2698R:G -> '0'2697R:A: adjacent_3p downward } 0 10 {'0'2698R:G -> '0'2699R:A: adjacent_5p upward } 0 11 {'0'2699R:A -> '0'2698R:G: adjacent_3p downward } 0 12 {'0'2699R:A -> '0'2700R:G: adjacent_5p upward } 0 13 {'0'2700R:G -> '0'2699R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 '0'2737R:C 0 1 '0'2738R:G 0 2 '0'2739R:A 0 3 '0'2740R:G 0 4 '0'2741R:A 0 5 '0'2742R:G 0 [Edges] 0 {'0'2737R:C -> '0'2738R:G: adjacent_5p } 0 1 {'0'2738R:G -> '0'2737R:C: adjacent_3p } 0 2 {'0'2737R:C -> '0'2742R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'2742R:G -> '0'2737R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'2738R:G -> '0'2739R:A: adjacent_5p upward } 0 5 {'0'2739R:A -> '0'2738R:G: adjacent_3p downward } 0 6 {'0'2739R:A -> '0'2740R:G: adjacent_5p upward } 0 7 {'0'2740R:G -> '0'2739R:A: adjacent_3p downward } 0 8 {'0'2740R:G -> '0'2741R:A: adjacent_5p upward } 0 9 {'0'2741R:A -> '0'2740R:G: adjacent_3p downward } 0 10 {'0'2741R:A -> '0'2742R:G: adjacent_5p upward } 0 11 {'0'2742R:G -> '0'2741R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'2838R:A 0 1 '0'2839R:C 0 2 '0'2840R:A 0 3 '0'2841R:A 0 4 '0'2842R:G 0 5 '0'2843R:A 0 [Edges] 0 {'0'2838R:A -> '0'2839R:C: adjacent_5p upward } 0 1 {'0'2839R:C -> '0'2838R:A: adjacent_3p downward } 0 2 {'0'2838R:A -> '0'2843R:A: pairing antiparallel cis one_hbond 40 Ss/Wh } 0 3 {'0'2843R:A -> '0'2838R:A: pairing antiparallel cis one_hbond 40 Wh/Ss } 0 4 {'0'2839R:C -> '0'2840R:A: adjacent_5p } 0 5 {'0'2840R:A -> '0'2839R:C: adjacent_3p } 0 6 {'0'2840R:A -> '0'2841R:A: adjacent_5p upward } 0 7 {'0'2841R:A -> '0'2840R:A: adjacent_3p downward } 0 8 {'0'2841R:A -> '0'2842R:G: adjacent_5p inward } 0 9 {'0'2842R:G -> '0'2841R:A: adjacent_3p inward } 0 10 {'0'2842R:G -> '0'2843R:A: adjacent_5p outward } 0 11 {'0'2843R:A -> '0'2842R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 '0'2876R:G 0 1 '0'2877R:G 0 2 '0'2878R:U 0 3 '0'2879R:A 0 4 '0'2880R:A 0 5 '0'2881R:C 0 [Edges] 0 {'0'2876R:G -> '0'2877R:G: adjacent_5p upward } 0 1 {'0'2877R:G -> '0'2876R:G: adjacent_3p downward } 0 2 {'0'2876R:G -> '0'2881R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {'0'2881R:C -> '0'2876R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {'0'2877R:G -> '0'2878R:U: adjacent_5p } 0 5 {'0'2878R:U -> '0'2877R:G: adjacent_3p } 0 6 {'0'2877R:G -> '0'2880R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'0'2880R:A -> '0'2877R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'0'2878R:U -> '0'2879R:A: adjacent_5p upward } 0 9 {'0'2879R:A -> '0'2878R:U: adjacent_3p downward } 0 10 {'0'2879R:A -> '0'2880R:A: adjacent_5p upward } 0 11 {'0'2880R:A -> '0'2879R:A: adjacent_3p downward } 0 12 {'0'2880R:A -> '0'2881R:C: adjacent_5p upward } 0 13 {'0'2881R:C -> '0'2880R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 '9'3089R:C 0 1 '9'3090R:G 0 2 '9'3091R:C 0 3 '9'3092R:G 0 4 '9'3093R:A 0 5 '9'3094R:G 0 [Edges] 0 {'9'3089R:C -> '9'3090R:G: adjacent_5p upward } 0 1 {'9'3090R:G -> '9'3089R:C: adjacent_3p downward } 0 2 {'9'3089R:C -> '9'3094R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {'9'3094R:G -> '9'3089R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {'9'3090R:G -> '9'3091R:C: adjacent_5p } 0 5 {'9'3091R:C -> '9'3090R:G: adjacent_3p } 0 6 {'9'3090R:G -> '9'3093R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {'9'3093R:A -> '9'3090R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {'9'3090R:G -> '9'3094R:G: outward } 0 9 {'9'3094R:G -> '9'3090R:G: outward } 0 10 {'9'3091R:C -> '9'3092R:G: adjacent_5p upward } 0 11 {'9'3092R:G -> '9'3091R:C: adjacent_3p downward } 0 12 {'9'3092R:G -> '9'3093R:A: adjacent_5p upward } 0 13 {'9'3093R:A -> '9'3092R:G: adjacent_3p downward } 0 14 {'9'3093R:A -> '9'3094R:G: adjacent_5p } 0 15 {'9'3094R:G -> '9'3093R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 A158R:G 0 1 A159R:G 0 2 A160R:A 0 3 A161R:A 0 4 A162R:A 0 5 A163R:C 0 [Edges] 0 {A158R:G -> A159R:G: adjacent_5p upward } 0 1 {A159R:G -> A158R:G: adjacent_3p downward } 0 2 {A158R:G -> A163R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A163R:C -> A158R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A159R:G -> A160R:A: adjacent_5p } 0 5 {A160R:A -> A159R:G: adjacent_3p } 0 6 {A159R:G -> A162R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A162R:A -> A159R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A160R:A -> A161R:A: adjacent_5p upward } 0 9 {A161R:A -> A160R:A: adjacent_3p downward } 0 10 {A161R:A -> A162R:A: adjacent_5p upward } 0 11 {A162R:A -> A161R:A: adjacent_3p downward } 0 12 {A162R:A -> A163R:C: adjacent_5p } 0 13 {A163R:C -> A162R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 A190.BR:C 0 1 A190.CR:C 0 2 A190.DR:U 0 3 A190.ER:U 0 4 A190.FR:G 0 5 A190.GR:G 0 [Edges] 0 {A190.BR:C -> A190.CR:C: adjacent_5p upward } 0 1 {A190.CR:C -> A190.BR:C: adjacent_3p downward } 0 2 {A190.BR:C -> A190.GR:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A190.GR:G -> A190.BR:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A190.CR:C -> A190.DR:U: adjacent_5p upward } 0 5 {A190.DR:U -> A190.CR:C: adjacent_3p downward } 0 6 {A190.DR:U -> A190.ER:U: adjacent_5p } 0 7 {A190.ER:U -> A190.DR:U: adjacent_3p } 0 8 {A190.ER:U -> A190.FR:G: adjacent_5p } 0 9 {A190.FR:G -> A190.ER:U: adjacent_3p } 0 10 {A190.FR:G -> A190.GR:G: adjacent_5p } 0 11 {A190.GR:G -> A190.FR:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A260R:G 0 1 A261R:U 0 2 A262R:A 0 3 A263R:A 0 4 A264R:U 0 5 A265R:G 0 [Edges] 0 {A260R:G -> A261R:U: adjacent_5p upward } 0 1 {A261R:U -> A260R:G: adjacent_3p downward } 0 2 {A260R:G -> A265R:G: pairing antiparallel trans one_hbond 110 Bs/Hh } 0 3 {A265R:G -> A260R:G: pairing antiparallel trans one_hbond 110 Hh/Bs } 0 4 {A261R:U -> A262R:A: adjacent_5p } 0 5 {A262R:A -> A261R:U: adjacent_3p } 0 6 {A262R:A -> A263R:A: adjacent_5p upward } 0 7 {A263R:A -> A262R:A: adjacent_3p downward } 0 8 {A263R:A -> A264R:U: adjacent_5p } 0 9 {A264R:U -> A263R:A: adjacent_3p } 0 10 {A264R:U -> A265R:G: adjacent_5p upward } 0 11 {A265R:G -> A264R:U: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A296R:U 0 1 A297R:G 0 2 A298R:A 0 3 A299R:G 0 4 A300R:A 0 5 A301R:G 0 [Edges] 0 {A296R:U -> A297R:G: adjacent_5p upward } 0 1 {A297R:G -> A296R:U: adjacent_3p downward } 0 2 {A296R:U -> A301R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {A301R:G -> A296R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {A297R:G -> A298R:A: adjacent_5p } 0 5 {A298R:A -> A297R:G: adjacent_3p } 0 6 {A297R:G -> A300R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A300R:A -> A297R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A298R:A -> A299R:G: adjacent_5p upward } 0 9 {A299R:G -> A298R:A: adjacent_3p downward } 0 10 {A299R:G -> A300R:A: adjacent_5p upward } 0 11 {A300R:A -> A299R:G: adjacent_3p downward } 0 12 {A300R:A -> A301R:G: adjacent_5p upward } 0 13 {A301R:G -> A300R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 A342R:C 0 1 A343R:U 0 2 A344R:A 0 3 A345R:C 0 4 A346R:G 0 5 A347R:G 0 [Edges] 0 {A342R:C -> A343R:U: adjacent_5p upward } 0 1 {A343R:U -> A342R:C: adjacent_3p downward } 0 2 {A342R:C -> A347R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A347R:G -> A342R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A343R:U -> A344R:A: adjacent_5p } 0 5 {A344R:A -> A343R:U: adjacent_3p } 0 6 {A343R:U -> A346R:G: pairing parallel trans 87 Bs/Ww } 0 7 {A346R:G -> A343R:U: pairing parallel trans 87 Ww/Bs } 0 8 {A344R:A -> A345R:C: adjacent_5p } 0 9 {A345R:C -> A344R:A: adjacent_3p } 0 10 {A345R:C -> A346R:G: adjacent_5p } 0 11 {A346R:G -> A345R:C: adjacent_3p } 0 12 {A346R:G -> A347R:G: adjacent_5p } 0 13 {A347R:G -> A346R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 A379R:C 0 1 A380R:G 0 2 A381R:C 0 3 A382R:A 0 4 A383R:A 0 5 A384R:G 0 [Edges] 0 {A379R:C -> A380R:G: adjacent_5p upward } 0 1 {A380R:G -> A379R:C: adjacent_3p downward } 0 2 {A379R:C -> A384R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A384R:G -> A379R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A380R:G -> A381R:C: adjacent_5p } 0 5 {A381R:C -> A380R:G: adjacent_3p } 0 6 {A380R:G -> A383R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A383R:A -> A380R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A380R:G -> A384R:G: outward } 0 9 {A384R:G -> A380R:G: outward } 0 10 {A381R:C -> A382R:A: adjacent_5p upward } 0 11 {A382R:A -> A381R:C: adjacent_3p downward } 0 12 {A382R:A -> A383R:A: adjacent_5p upward } 0 13 {A383R:A -> A382R:A: adjacent_3p downward } 0 14 {A383R:A -> A384R:G: adjacent_5p } 0 15 {A384R:G -> A383R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 A522R:C 0 1 A523R:A 0 2 A524R:G 0 3 A525R:C 0 4 A526R:C 0 5 A527R:G 0 [Edges] 0 {A522R:C -> A523R:A: adjacent_5p upward } 0 1 {A523R:A -> A522R:C: adjacent_3p downward } 0 2 {A522R:C -> A527R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A527R:G -> A522R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A523R:A -> A524R:G: adjacent_5p } 0 5 {A524R:G -> A523R:A: adjacent_3p } 0 6 {A524R:G -> A525R:C: adjacent_5p upward } 0 7 {A525R:C -> A524R:G: adjacent_3p downward } 0 8 {A525R:C -> A526R:C: adjacent_5p upward } 0 9 {A526R:C -> A525R:C: adjacent_3p downward } 0 10 {A526R:C -> A527R:G: adjacent_5p } 0 11 {A527R:G -> A526R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A691R:G 0 1 A692R:U 0 2 A693R:G 0 3 A694R:A 0 4 A695R:A 0 5 A696R:A 0 [Edges] 0 {A691R:G -> A692R:U: adjacent_5p upward } 0 1 {A692R:U -> A691R:G: adjacent_3p downward } 0 2 {A691R:G -> A696R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A696R:A -> A691R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A692R:U -> A693R:G: adjacent_5p } 0 5 {A693R:G -> A692R:U: adjacent_3p } 0 6 {A693R:G -> A694R:A: adjacent_5p upward } 0 7 {A694R:A -> A693R:G: adjacent_3p downward } 0 8 {A694R:A -> A695R:A: adjacent_5p upward } 0 9 {A695R:A -> A694R:A: adjacent_3p downward } 0 10 {A695R:A -> A696R:A: adjacent_5p upward } 0 11 {A696R:A -> A695R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A726R:C 0 1 A727R:G 0 2 A728R:A 0 3 A729R:A 0 4 A730R:G 0 5 A731R:G 0 [Edges] 0 {A726R:C -> A727R:G: adjacent_5p } 0 1 {A727R:G -> A726R:C: adjacent_3p } 0 2 {A726R:C -> A731R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A731R:G -> A726R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A727R:G -> A728R:A: adjacent_5p } 0 5 {A728R:A -> A727R:G: adjacent_3p } 0 6 {A727R:G -> A730R:G: pairing antiparallel trans one_hbond 108 Sw/Hh } 0 7 {A730R:G -> A727R:G: pairing antiparallel trans one_hbond 108 Hh/Sw } 0 8 {A727R:G -> A731R:G: outward } 0 9 {A731R:G -> A727R:G: outward } 0 10 {A728R:A -> A729R:A: adjacent_5p upward } 0 11 {A729R:A -> A728R:A: adjacent_3p downward } 0 12 {A729R:A -> A730R:G: adjacent_5p upward } 0 13 {A730R:G -> A729R:A: adjacent_3p downward } 0 14 {A730R:G -> A731R:G: adjacent_5p } 0 15 {A731R:G -> A730R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 A862R:C 0 1 A863R:U 0 2 A864R:A 0 3 A865R:A 0 4 A866R:C 0 5 A867R:G 0 [Edges] 0 {A862R:C -> A863R:U: adjacent_5p upward } 0 1 {A863R:U -> A862R:C: adjacent_3p downward } 0 2 {A862R:C -> A867R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A867R:G -> A862R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A863R:U -> A864R:A: adjacent_5p } 0 5 {A864R:A -> A863R:U: adjacent_3p } 0 6 {A863R:U -> A866R:C: pairing antiparallel trans one_hbond 97 Ss/Hw } 0 7 {A866R:C -> A863R:U: pairing antiparallel trans one_hbond 97 Hw/Ss } 0 8 {A864R:A -> A865R:A: adjacent_5p upward } 0 9 {A865R:A -> A864R:A: adjacent_3p downward } 0 10 {A865R:A -> A866R:C: adjacent_5p upward } 0 11 {A866R:C -> A865R:A: adjacent_3p downward } 0 12 {A866R:C -> A867R:G: adjacent_5p } 0 13 {A867R:G -> A866R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 A897R:C 0 1 A898R:G 0 2 A899R:C 0 3 A900R:A 0 4 A901R:A 0 5 A902R:G 0 [Edges] 0 {A897R:C -> A898R:G: adjacent_5p upward } 0 1 {A898R:G -> A897R:C: adjacent_3p downward } 0 2 {A897R:C -> A902R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A902R:G -> A897R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A898R:G -> A899R:C: adjacent_5p } 0 5 {A899R:C -> A898R:G: adjacent_3p } 0 6 {A898R:G -> A901R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 7 {A901R:A -> A898R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 8 {A898R:G -> A902R:G: outward } 0 9 {A902R:G -> A898R:G: outward } 0 10 {A899R:C -> A900R:A: adjacent_5p upward } 0 11 {A900R:A -> A899R:C: adjacent_3p downward } 0 12 {A900R:A -> A901R:A: adjacent_5p upward } 0 13 {A901R:A -> A900R:A: adjacent_3p downward } 0 14 {A901R:A -> A902R:G: adjacent_5p } 0 15 {A902R:G -> A901R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 A1012R:U 0 1 A1013R:G 0 2 A1014R:A 0 3 A1015R:A 0 4 A1016R:A 0 5 A1017R:G 0 [Edges] 0 {A1012R:U -> A1013R:G: adjacent_5p upward } 0 1 {A1013R:G -> A1012R:U: adjacent_3p downward } 0 2 {A1012R:U -> A1017R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {A1017R:G -> A1012R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {A1013R:G -> A1014R:A: adjacent_5p } 0 5 {A1014R:A -> A1013R:G: adjacent_3p } 0 6 {A1013R:G -> A1016R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 7 {A1016R:A -> A1013R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 8 {A1014R:A -> A1015R:A: adjacent_5p upward } 0 9 {A1015R:A -> A1014R:A: adjacent_3p downward } 0 10 {A1015R:A -> A1016R:A: adjacent_5p upward } 0 11 {A1016R:A -> A1015R:A: adjacent_3p downward } 0 12 {A1016R:A -> A1017R:G: adjacent_5p upward } 0 13 {A1017R:G -> A1016R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 A1028R:C 0 1 A1029R:C 0 2 A1030R:C 0 3 A1031R:G 0 4 A1032R:G 0 5 A1033R:G 0 [Edges] 0 {A1028R:C -> A1029R:C: adjacent_5p upward } 0 1 {A1029R:C -> A1028R:C: adjacent_3p downward } 0 2 {A1028R:C -> A1032R:G: pairing antiparallel cis one_hbond Ww/Ws } 0 3 {A1032R:G -> A1028R:C: pairing antiparallel cis one_hbond Ws/Ww } 0 4 {A1028R:C -> A1033R:G: pairing antiparallel trans one_hbond 122 Wh/Hw } 0 5 {A1033R:G -> A1028R:C: pairing antiparallel trans one_hbond 122 Hw/Wh } 0 6 {A1029R:C -> A1030R:C: adjacent_5p upward } 0 7 {A1030R:C -> A1029R:C: adjacent_3p downward } 0 8 {A1029R:C -> A1032R:G: pairing antiparallel cis one_hbond Wh/Wh } 0 9 {A1032R:G -> A1029R:C: pairing antiparallel cis one_hbond Wh/Wh } 0 10 {A1030R:C -> A1031R:G: adjacent_5p } 0 11 {A1031R:G -> A1030R:C: adjacent_3p } 0 12 {A1031R:G -> A1032R:G: adjacent_5p } 0 13 {A1032R:G -> A1031R:G: adjacent_3p } 0 14 {A1032R:G -> A1033R:G: adjacent_5p } 0 15 {A1033R:G -> A1032R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . 2 4 1 1 . 6 . 8 . 2 . 7 . 10 . . 3 . . 11 . 12 . 4 3 9 . 13 . 14 5 5 . . . 15 . [GraphModel] [Vertices] 0 A1076R:C 0 1 A1077R:G 0 2 A1078R:U 0 3 A1079R:G 0 4 A1080R:A 0 5 A1081R:G 0 [Edges] 0 {A1076R:C -> A1077R:G: adjacent_5p upward } 0 1 {A1077R:G -> A1076R:C: adjacent_3p downward } 0 2 {A1076R:C -> A1081R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A1081R:G -> A1076R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A1077R:G -> A1078R:U: adjacent_5p } 0 5 {A1078R:U -> A1077R:G: adjacent_3p } 0 6 {A1077R:G -> A1081R:G: outward } 0 7 {A1081R:G -> A1077R:G: outward } 0 8 {A1078R:U -> A1079R:G: adjacent_5p upward } 0 9 {A1079R:G -> A1078R:U: adjacent_3p downward } 0 10 {A1079R:G -> A1080R:A: adjacent_5p upward } 0 11 {A1080R:A -> A1079R:G: adjacent_3p downward } 0 12 {A1080R:A -> A1081R:G: adjacent_5p } 0 13 {A1081R:G -> A1080R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . [GraphModel] [Vertices] 0 A1090R:U 0 1 A1091R:U 0 2 A1092R:A 0 3 A1093R:A 0 4 A1094R:G 0 5 A1095R:U 0 [Edges] 0 {A1090R:U -> A1091R:U: adjacent_5p } 0 1 {A1091R:U -> A1090R:U: adjacent_3p } 0 2 {A1090R:U -> A1095R:U: pairing antiparallel cis XVI Ws/Ww } 0 3 {A1095R:U -> A1090R:U: pairing antiparallel cis XVI Ww/Ws } 0 4 {A1091R:U -> A1092R:A: adjacent_5p } 0 5 {A1092R:A -> A1091R:U: adjacent_3p } 0 6 {A1092R:A -> A1093R:A: adjacent_5p upward } 0 7 {A1093R:A -> A1092R:A: adjacent_3p downward } 0 8 {A1093R:A -> A1094R:G: adjacent_5p } 0 9 {A1094R:G -> A1093R:A: adjacent_3p } 0 10 {A1094R:G -> A1095R:U: adjacent_5p } 0 11 {A1095R:U -> A1094R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A1165R:C 0 1 A1166R:G 0 2 A1167R:A 0 3 A1168R:A 0 4 A1169R:A 0 5 A1171R:G 0 [Edges] 0 {A1165R:C -> A1166R:G: adjacent_5p upward } 0 1 {A1166R:G -> A1165R:C: adjacent_3p downward } 0 2 {A1165R:C -> A1171R:G: pairing antiparallel cis one_hbond Ww/Ww } 0 3 {A1171R:G -> A1165R:C: pairing antiparallel cis one_hbond Ww/Ww } 0 4 {A1166R:G -> A1167R:A: adjacent_5p } 0 5 {A1167R:A -> A1166R:G: adjacent_3p } 0 6 {A1166R:G -> A1171R:G: outward } 0 7 {A1171R:G -> A1166R:G: outward } 0 8 {A1167R:A -> A1168R:A: adjacent_5p upward } 0 9 {A1168R:A -> A1167R:A: adjacent_3p downward } 0 10 {A1168R:A -> A1169R:A: adjacent_5p upward } 0 11 {A1169R:A -> A1168R:A: adjacent_3p downward } 0 12 {A1169R:A -> A1171R:G: adjacent_5p upward } 0 13 {A1171R:G -> A1169R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . [GraphModel] [Vertices] 0 A1265R:G 0 1 A1266R:G 0 2 A1267R:C 0 3 A1268R:A 0 4 A1269R:A 0 5 A1270R:C 0 [Edges] 0 {A1265R:G -> A1266R:G: adjacent_5p upward } 0 1 {A1266R:G -> A1265R:G: adjacent_3p downward } 0 2 {A1265R:G -> A1270R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A1270R:C -> A1265R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A1266R:G -> A1267R:C: adjacent_5p } 0 5 {A1267R:C -> A1266R:G: adjacent_3p } 0 6 {A1267R:C -> A1268R:A: adjacent_5p upward } 0 7 {A1268R:A -> A1267R:C: adjacent_3p downward } 0 8 {A1268R:A -> A1269R:A: adjacent_5p upward } 0 9 {A1269R:A -> A1268R:A: adjacent_3p downward } 0 10 {A1269R:A -> A1270R:C: adjacent_5p } 0 11 {A1270R:C -> A1269R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A1358R:U 0 1 A1359R:C 0 2 A1360R:A 0 3 A1361R:G 0 4 A1362R:C 0 5 A1363R:A 0 [Edges] 0 {A1358R:U -> A1359R:C: adjacent_5p } 0 1 {A1359R:C -> A1358R:U: adjacent_3p } 0 2 {A1358R:U -> A1363R:A: pairing parallel trans XXI Ww/Ww } 0 3 {A1363R:A -> A1358R:U: pairing parallel trans XXI Ww/Ww } 0 4 {A1359R:C -> A1360R:A: adjacent_5p } 0 5 {A1360R:A -> A1359R:C: adjacent_3p } 0 6 {A1360R:A -> A1361R:G: adjacent_5p upward } 0 7 {A1361R:G -> A1360R:A: adjacent_3p downward } 0 8 {A1361R:G -> A1362R:C: adjacent_5p } 0 9 {A1362R:C -> A1361R:G: adjacent_3p } 0 10 {A1362R:C -> A1363R:A: adjacent_5p } 0 11 {A1363R:A -> A1362R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 A1449R:C 0 1 A1450R:U 0 2 A1451R:A 0 3 A1452R:C 0 4 A1453R:G 0 5 A1454R:G 0 [Edges] 0 {A1449R:C -> A1450R:U: adjacent_5p upward } 0 1 {A1450R:U -> A1449R:C: adjacent_3p downward } 0 2 {A1449R:C -> A1454R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A1454R:G -> A1449R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A1450R:U -> A1451R:A: adjacent_5p } 0 5 {A1451R:A -> A1450R:U: adjacent_3p } 0 6 {A1450R:U -> A1453R:G: pairing parallel trans one_hbond Ws/Ww } 0 7 {A1453R:G -> A1450R:U: pairing parallel trans one_hbond Ww/Ws } 0 8 {A1451R:A -> A1452R:C: adjacent_5p } 0 9 {A1452R:C -> A1451R:A: adjacent_3p } 0 10 {A1452R:C -> A1453R:G: adjacent_5p } 0 11 {A1453R:G -> A1452R:C: adjacent_3p } 0 12 {A1453R:G -> A1454R:G: adjacent_5p outward } 0 13 {A1454R:G -> A1453R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 A1515R:C 0 1 A1516R:G 0 2 A1517R:G 0 3 A1518R:A 0 4 A1519R:A 0 5 A1520R:G 0 [Edges] 0 {A1515R:C -> A1516R:G: adjacent_5p } 0 1 {A1516R:G -> A1515R:C: adjacent_3p } 0 2 {A1515R:C -> A1520R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A1520R:G -> A1515R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A1516R:G -> A1517R:G: adjacent_5p } 0 5 {A1517R:G -> A1516R:G: adjacent_3p } 0 6 {A1516R:G -> A1520R:G: outward } 0 7 {A1520R:G -> A1516R:G: outward } 0 8 {A1517R:G -> A1518R:A: adjacent_5p upward } 0 9 {A1518R:A -> A1517R:G: adjacent_3p downward } 0 10 {A1518R:A -> A1519R:A: adjacent_5p upward } 0 11 {A1519R:A -> A1518R:A: adjacent_3p downward } 0 12 {A1519R:A -> A1520R:G: adjacent_5p } 0 13 {A1520R:G -> A1519R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A12R:C 0 1 A13R:U 0 2 A14R:U 0 3 A15R:C 0 4 A16R:G 0 5 A17R:G 0 [Edges] 0 {A12R:C -> A13R:U: adjacent_5p upward } 0 1 {A13R:U -> A12R:C: adjacent_3p downward } 0 2 {A12R:C -> A17R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A17R:G -> A12R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A13R:U -> A14R:U: adjacent_5p } 0 5 {A14R:U -> A13R:U: adjacent_3p } 0 6 {A13R:U -> A16R:G: pairing parallel trans one_hbond Bs/Ww } 0 7 {A16R:G -> A13R:U: pairing parallel trans one_hbond Ww/Bs } 0 8 {A14R:U -> A15R:C: adjacent_5p } 0 9 {A15R:C -> A14R:U: adjacent_3p } 0 10 {A15R:C -> A16R:G: adjacent_5p } 0 11 {A16R:G -> A15R:C: adjacent_3p } 0 12 {A16R:G -> A17R:G: adjacent_5p outward } 0 13 {A17R:G -> A16R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A12R:C 0 1 A13R:U 0 2 A14R:U 0 3 A15R:C 0 4 A16R:G 0 5 A17R:G 0 [Edges] 0 {A12R:C -> A13R:U: adjacent_5p upward } 0 1 {A13R:U -> A12R:C: adjacent_3p downward } 0 2 {A12R:C -> A17R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A17R:G -> A12R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A13R:U -> A14R:U: adjacent_5p } 0 5 {A14R:U -> A13R:U: adjacent_3p } 0 6 {A13R:U -> A16R:G: pairing parallel trans one_hbond Bs/Ww } 0 7 {A16R:G -> A13R:U: pairing parallel trans one_hbond Ww/Bs } 0 8 {A14R:U -> A15R:C: adjacent_5p } 0 9 {A15R:C -> A14R:U: adjacent_3p } 0 10 {A15R:C -> A16R:G: adjacent_5p } 0 11 {A16R:G -> A15R:C: adjacent_3p } 0 12 {A16R:G -> A17R:G: adjacent_5p outward } 0 13 {A17R:G -> A16R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A5R:A 0 1 A6R:U 0 2 A7R:C 0 3 A8R:G 0 4 A9R:C 0 5 A10R:A 0 [Edges] 0 {A5R:A -> A6R:U: adjacent_5p upward } 0 1 {A6R:U -> A5R:A: adjacent_3p downward } 0 2 {A5R:A -> A10R:A: pairing antiparallel trans 41 Ss/Hh } 0 3 {A10R:A -> A5R:A: pairing antiparallel trans 41 Hh/Ss } 0 4 {A6R:U -> A7R:C: adjacent_5p } 0 5 {A7R:C -> A6R:U: adjacent_3p } 0 6 {A7R:C -> A8R:G: adjacent_5p upward } 0 7 {A8R:G -> A7R:C: adjacent_3p downward } 0 8 {A8R:G -> A9R:C: adjacent_5p upward } 0 9 {A9R:C -> A8R:G: adjacent_3p downward } 0 10 {A9R:C -> A10R:A: adjacent_5p upward } 0 11 {A10R:A -> A9R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 C143R:G 0 1 C144R:U 0 2 C145R:A 0 3 C146R:A 0 4 C147R:U 0 5 C148R:A 0 [Edges] 0 {C143R:G -> C144R:U: adjacent_5p upward } 0 1 {C144R:U -> C143R:G: adjacent_3p downward } 0 2 {C143R:G -> C148R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {C148R:A -> C143R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {C144R:U -> C145R:A: adjacent_5p } 0 5 {C145R:A -> C144R:U: adjacent_3p } 0 6 {C145R:A -> C146R:A: adjacent_5p upward } 0 7 {C146R:A -> C145R:A: adjacent_3p downward } 0 8 {C146R:A -> C147R:U: adjacent_5p upward } 0 9 {C147R:U -> C146R:A: adjacent_3p downward } 0 10 {C147R:U -> C148R:A: adjacent_5p upward } 0 11 {C148R:A -> C147R:U: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . [GraphModel] [Vertices] 0 D343R:G 0 1 D344R:U 0 2 D345R:A 0 3 D346R:A 0 4 D347R:U 0 5 D348R:A 0 [Edges] 0 {D343R:G -> D344R:U: adjacent_5p upward } 0 1 {D344R:U -> D343R:G: adjacent_3p downward } 0 2 {D343R:G -> D348R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {D348R:A -> D343R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {D344R:U -> D345R:A: adjacent_5p } 0 5 {D345R:A -> D344R:U: adjacent_3p } 0 6 {D345R:A -> D346R:A: adjacent_5p upward } 0 7 {D346R:A -> D345R:A: adjacent_3p downward } 0 8 {D346R:A -> D347R:U: adjacent_5p upward } 0 9 {D347R:U -> D346R:A: adjacent_3p downward } 0 10 {D347R:U -> D348R:A: adjacent_5p upward } 0 11 {D348R:A -> D347R:U: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A19R:C 0 1 A20R:A 0 2 A21R:C 0 3 A22R:A 0 4 A23R:A 0 5 A24R:G 0 [Edges] 0 {A19R:C -> A20R:A: adjacent_5p upward } 0 1 {A20R:A -> A19R:C: adjacent_3p downward } 0 2 {A19R:C -> A24R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A24R:G -> A19R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A20R:A -> A21R:C: adjacent_5p upward } 0 5 {A21R:C -> A20R:A: adjacent_3p downward } 0 6 {A20R:A -> A23R:A: pairing antiparallel trans 41 Ss/Hh } 0 7 {A23R:A -> A20R:A: pairing antiparallel trans 41 Hh/Ss } 0 8 {A21R:C -> A22R:A: adjacent_5p } 0 9 {A22R:A -> A21R:C: adjacent_3p } 0 10 {A22R:A -> A23R:A: adjacent_5p upward } 0 11 {A23R:A -> A22R:A: adjacent_3p downward } 0 12 {A23R:A -> A24R:G: adjacent_5p upward } 0 13 {A24R:G -> A23R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A7R:C 0 1 A8R:G 0 2 A9R:U 0 3 A10R:U 0 4 A11R:A 0 5 A12R:G 0 [Edges] 0 {A7R:C -> A8R:G: adjacent_5p } 0 1 {A8R:G -> A7R:C: adjacent_3p } 0 2 {A7R:C -> A12R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A12R:G -> A7R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A8R:G -> A9R:U: adjacent_5p } 0 5 {A9R:U -> A8R:G: adjacent_3p } 0 6 {A8R:G -> A10R:U: upward } 0 7 {A10R:U -> A8R:G: downward } 0 8 {A9R:U -> A10R:U: adjacent_5p } 0 9 {A10R:U -> A9R:U: adjacent_3p } 0 10 {A10R:U -> A11R:A: adjacent_5p } 0 11 {A11R:A -> A10R:U: adjacent_3p } 0 12 {A11R:A -> A12R:G: adjacent_5p outward } 0 13 {A12R:G -> A11R:A: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A270R:C 0 1 A271R:U 0 2 A272R:U 0 3 A284R:C 0 4 A285R:G 0 5 A286R:G 0 [Edges] 0 {A270R:C -> A271R:U: adjacent_5p } 0 1 {A271R:U -> A270R:C: adjacent_3p } 0 2 {A270R:C -> A286R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A286R:G -> A270R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A271R:U -> A272R:U: adjacent_5p } 0 5 {A272R:U -> A271R:U: adjacent_3p } 0 6 {A271R:U -> A285R:G: pairing parallel trans one_hbond Ws/Ww } 0 7 {A285R:G -> A271R:U: pairing parallel trans one_hbond Ww/Ws } 0 8 {A272R:U -> A284R:C: adjacent_5p } 0 9 {A284R:C -> A272R:U: adjacent_3p } 0 10 {A284R:C -> A285R:G: adjacent_5p } 0 11 {A285R:G -> A284R:C: adjacent_3p } 0 12 {A285R:G -> A286R:G: adjacent_5p } 0 13 {A286R:G -> A285R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A162R:U 0 1 A163R:G 0 2 A164R:U 0 3 A165R:A 0 4 A166R:G 0 5 A167R:G 0 [Edges] 0 {A162R:U -> A163R:G: adjacent_5p } 0 1 {A163R:G -> A162R:U: adjacent_3p } 0 2 {A162R:U -> A167R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {A167R:G -> A162R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {A163R:G -> A164R:U: adjacent_5p } 0 5 {A164R:U -> A163R:G: adjacent_3p } 0 6 {A163R:G -> A167R:G: outward } 0 7 {A167R:G -> A163R:G: outward } 0 8 {A164R:U -> A165R:A: adjacent_5p } 0 9 {A165R:A -> A164R:U: adjacent_3p } 0 10 {A165R:A -> A166R:G: adjacent_5p upward } 0 11 {A166R:G -> A165R:A: adjacent_3p downward } 0 12 {A166R:G -> A167R:G: adjacent_5p } 0 13 {A167R:G -> A166R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . [GraphModel] [Vertices] 0 A208R:C 0 1 A209R:G 0 2 A210R:G 0 3 A211R:A 0 4 A212R:A 0 5 A213R:G 0 [Edges] 0 {A208R:C -> A209R:G: adjacent_5p upward } 0 1 {A209R:G -> A208R:C: adjacent_3p downward } 0 2 {A208R:C -> A213R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A213R:G -> A208R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A209R:G -> A210R:G: adjacent_5p } 0 5 {A210R:G -> A209R:G: adjacent_3p } 0 6 {A209R:G -> A212R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A212R:A -> A209R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A210R:G -> A211R:A: adjacent_5p upward } 0 9 {A211R:A -> A210R:G: adjacent_3p downward } 0 10 {A211R:A -> A212R:A: adjacent_5p upward } 0 11 {A212R:A -> A211R:A: adjacent_3p downward } 0 12 {A212R:A -> A213R:G: adjacent_5p upward } 0 13 {A213R:G -> A212R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A17R:U 0 1 A18R:A 0 2 A19R:C 0 3 A20R:A 0 4 A21R:A 0 5 A22R:G 0 [Edges] 0 {A17R:U -> A18R:A: adjacent_5p upward } 0 1 {A18R:A -> A17R:U: adjacent_3p downward } 0 2 {A17R:U -> A22R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {A22R:G -> A17R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {A18R:A -> A19R:C: adjacent_5p upward } 0 5 {A19R:C -> A18R:A: adjacent_3p downward } 0 6 {A18R:A -> A22R:G: outward } 0 7 {A22R:G -> A18R:A: outward } 0 8 {A19R:C -> A20R:A: adjacent_5p } 0 9 {A20R:A -> A19R:C: adjacent_3p } 0 10 {A20R:A -> A21R:A: adjacent_5p upward } 0 11 {A21R:A -> A20R:A: adjacent_3p downward } 0 12 {A21R:A -> A22R:G: adjacent_5p } 0 13 {A22R:G -> A21R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . MOLECULE: [GraphModel] [Vertices] 0 R8R:G 0 1 R9R:A 0 2 R10R:U 0 3 R11R:C 0 4 R12R:A 0 5 R13R:C 0 [Edges] 0 {R8R:G -> R9R:A: adjacent_5p upward } 0 1 {R9R:A -> R8R:G: adjacent_3p downward } 0 2 {R8R:G -> R13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {R13R:C -> R8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {R9R:A -> R10R:U: adjacent_5p } 0 5 {R10R:U -> R9R:A: adjacent_3p } 0 6 {R9R:A -> R11R:C: upward } 0 7 {R11R:C -> R9R:A: downward } 0 8 {R9R:A -> R13R:C: outward } 0 9 {R13R:C -> R9R:A: outward } 0 10 {R10R:U -> R11R:C: adjacent_5p } 0 11 {R11R:C -> R10R:U: adjacent_3p } 0 12 {R11R:C -> R12R:A: adjacent_5p } 0 13 {R12R:A -> R11R:C: adjacent_3p } 0 14 {R12R:A -> R13R:C: adjacent_5p } 0 15 {R13R:C -> R12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . 8 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . . . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 S8R:G 0 1 S9R:A 0 2 S10R:U 0 3 S11R:C 0 4 S12R:A 0 5 S13R:C 0 [Edges] 0 {S8R:G -> S9R:A: adjacent_5p upward } 0 1 {S9R:A -> S8R:G: adjacent_3p downward } 0 2 {S8R:G -> S13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {S13R:C -> S8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {S9R:A -> S10R:U: adjacent_5p } 0 5 {S10R:U -> S9R:A: adjacent_3p } 0 6 {S9R:A -> S11R:C: upward } 0 7 {S11R:C -> S9R:A: downward } 0 8 {S9R:A -> S13R:C: outward } 0 9 {S13R:C -> S9R:A: outward } 0 10 {S10R:U -> S11R:C: adjacent_5p } 0 11 {S11R:C -> S10R:U: adjacent_3p } 0 12 {S11R:C -> S12R:A: adjacent_5p } 0 13 {S12R:A -> S11R:C: adjacent_3p } 0 14 {S12R:A -> S13R:C: adjacent_5p } 0 15 {S13R:C -> S12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . 8 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . . . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 R10R:G 0 1 R11R:A 0 2 R12R:U 0 3 R13R:C 0 4 R14R:A 0 5 R15R:C 0 [Edges] 0 {R10R:G -> R11R:A: adjacent_5p upward } 0 1 {R11R:A -> R10R:G: adjacent_3p downward } 0 2 {R10R:G -> R15R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {R15R:C -> R10R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {R11R:A -> R12R:U: adjacent_5p } 0 5 {R12R:U -> R11R:A: adjacent_3p } 0 6 {R11R:A -> R13R:C: upward } 0 7 {R13R:C -> R11R:A: downward } 0 8 {R11R:A -> R15R:C: outward } 0 9 {R15R:C -> R11R:A: outward } 0 10 {R12R:U -> R13R:C: adjacent_5p } 0 11 {R13R:C -> R12R:U: adjacent_3p } 0 12 {R13R:C -> R14R:A: adjacent_5p } 0 13 {R14R:A -> R13R:C: adjacent_3p } 0 14 {R14R:A -> R15R:C: adjacent_5p } 0 15 {R15R:C -> R14R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . 8 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . . . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 S10R:G 0 1 S11R:A 0 2 S12R:U 0 3 S13R:C 0 4 S14R:A 0 5 S15R:C 0 [Edges] 0 {S10R:G -> S11R:A: adjacent_5p upward } 0 1 {S11R:A -> S10R:G: adjacent_3p downward } 0 2 {S10R:G -> S15R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {S15R:C -> S10R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {S11R:A -> S12R:U: adjacent_5p } 0 5 {S12R:U -> S11R:A: adjacent_3p } 0 6 {S11R:A -> S13R:C: upward } 0 7 {S13R:C -> S11R:A: downward } 0 8 {S11R:A -> S15R:C: outward } 0 9 {S15R:C -> S11R:A: outward } 0 10 {S12R:U -> S13R:C: adjacent_5p } 0 11 {S13R:C -> S12R:U: adjacent_3p } 0 12 {S13R:C -> S14R:A: adjacent_5p } 0 13 {S14R:A -> S13R:C: adjacent_3p } 0 14 {S14R:A -> S15R:C: adjacent_5p } 0 15 {S15R:C -> S14R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . 8 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . . . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 4R:C 0 1 5R:G 0 2 6R:A 0 3 7R:G 0 4 8R:A 0 5 9R:G 0 [Edges] 0 {4R:C -> 5R:G: adjacent_5p upward } 0 1 {5R:G -> 4R:C: adjacent_3p downward } 0 2 {4R:C -> 9R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {9R:G -> 4R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {5R:G -> 6R:A: adjacent_5p } 0 5 {6R:A -> 5R:G: adjacent_3p } 0 6 {5R:G -> 8R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {8R:A -> 5R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {6R:A -> 7R:G: adjacent_5p upward } 0 9 {7R:G -> 6R:A: adjacent_3p downward } 0 10 {7R:G -> 8R:A: adjacent_5p upward } 0 11 {8R:A -> 7R:G: adjacent_3p downward } 0 12 {8R:A -> 9R:G: adjacent_5p } 0 13 {9R:G -> 8R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 4R:C 0 1 5R:G 0 2 6R:C 0 3 7R:A 0 4 8R:A 0 5 9R:G 0 [Edges] 0 {4R:C -> 5R:G: adjacent_5p upward } 0 1 {5R:G -> 4R:C: adjacent_3p downward } 0 2 {4R:C -> 9R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {9R:G -> 4R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {5R:G -> 6R:C: adjacent_5p } 0 5 {6R:C -> 5R:G: adjacent_3p } 0 6 {5R:G -> 8R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {8R:A -> 5R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {6R:C -> 7R:A: adjacent_5p upward } 0 9 {7R:A -> 6R:C: adjacent_3p downward } 0 10 {7R:A -> 8R:A: adjacent_5p upward } 0 11 {8R:A -> 7R:A: adjacent_3p downward } 0 12 {8R:A -> 9R:G: adjacent_5p upward } 0 13 {9R:G -> 8R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A12R:C 0 1 A13R:G 0 2 A14R:G 0 3 A15R:A 0 4 A16R:A 0 5 A17R:G 0 [Edges] 0 {A12R:C -> A13R:G: adjacent_5p upward } 0 1 {A13R:G -> A12R:C: adjacent_3p downward } 0 2 {A12R:C -> A17R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A17R:G -> A12R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A13R:G -> A14R:G: adjacent_5p } 0 5 {A14R:G -> A13R:G: adjacent_3p } 0 6 {A13R:G -> A16R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {A16R:A -> A13R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {A14R:G -> A15R:A: adjacent_5p upward } 0 9 {A15R:A -> A14R:G: adjacent_3p downward } 0 10 {A15R:A -> A16R:A: adjacent_5p upward } 0 11 {A16R:A -> A15R:A: adjacent_3p downward } 0 12 {A16R:A -> A17R:G: adjacent_5p upward } 0 13 {A17R:G -> A16R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 '2'16R:U 0 1 '2'17R:C 0 2 '2'18R:A 0 3 '2'19R:U 0 4 '2'20R:U 0 5 '2'21R:A 0 [Edges] 0 {'2'16R:U -> '2'17R:C: adjacent_5p pairing antiparallel trans 97 Bs/Hh } 0 1 {'2'17R:C -> '2'16R:U: adjacent_3p pairing antiparallel trans 97 Hh/Bs } 0 2 {'2'16R:U -> '2'21R:A: pairing antiparallel cis XX Ww/Ww } 0 3 {'2'21R:A -> '2'16R:U: pairing antiparallel cis XX Ww/Ww } 0 4 {'2'17R:C -> '2'18R:A: adjacent_5p } 0 5 {'2'18R:A -> '2'17R:C: adjacent_3p } 0 6 {'2'18R:A -> '2'19R:U: adjacent_5p pairing antiparallel cis one_hbond Ss/Hh } 0 7 {'2'19R:U -> '2'18R:A: adjacent_3p pairing antiparallel cis one_hbond Hh/Ss } 0 8 {'2'19R:U -> '2'20R:U: adjacent_5p } 0 9 {'2'20R:U -> '2'19R:U: adjacent_3p } 0 10 {'2'20R:U -> '2'21R:A: adjacent_5p } 0 11 {'2'21R:A -> '2'20R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A19R:G 0 1 A20R:G 0 2 A21R:A 0 3 A22R:A 0 4 A23R:A 0 5 A24R:C 0 [Edges] 0 {A19R:G -> A20R:G: adjacent_5p upward } 0 1 {A20R:G -> A19R:G: adjacent_3p downward } 0 2 {A19R:G -> A24R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A24R:C -> A19R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A20R:G -> A21R:A: adjacent_5p } 0 5 {A21R:A -> A20R:G: adjacent_3p } 0 6 {A20R:G -> A23R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A23R:A -> A20R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A21R:A -> A22R:A: adjacent_5p upward } 0 9 {A22R:A -> A21R:A: adjacent_3p downward } 0 10 {A22R:A -> A23R:A: adjacent_5p upward } 0 11 {A23R:A -> A22R:A: adjacent_3p downward } 0 12 {A23R:A -> A24R:C: adjacent_5p upward } 0 13 {A24R:C -> A23R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 B62R:G 0 1 B63R:G 0 2 B64R:A 0 3 B65R:A 0 4 B66R:A 0 5 B67R:C 0 [Edges] 0 {B62R:G -> B63R:G: adjacent_5p upward } 0 1 {B63R:G -> B62R:G: adjacent_3p downward } 0 2 {B62R:G -> B67R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {B67R:C -> B62R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {B63R:G -> B64R:A: adjacent_5p } 0 5 {B64R:A -> B63R:G: adjacent_3p } 0 6 {B63R:G -> B66R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {B66R:A -> B63R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {B64R:A -> B65R:A: adjacent_5p upward } 0 9 {B65R:A -> B64R:A: adjacent_3p downward } 0 10 {B65R:A -> B66R:A: adjacent_5p upward } 0 11 {B66R:A -> B65R:A: adjacent_3p downward } 0 12 {B66R:A -> B67R:C: adjacent_5p upward } 0 13 {B67R:C -> B66R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A20R:C 0 1 A21R:U 0 2 A22R:U 0 3 A23R:C 0 4 A24R:G 0 5 A25R:G 0 [Edges] 0 {A20R:C -> A21R:U: adjacent_5p } 0 1 {A21R:U -> A20R:C: adjacent_3p } 0 2 {A20R:C -> A25R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A25R:G -> A20R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A21R:U -> A22R:U: adjacent_5p } 0 5 {A22R:U -> A21R:U: adjacent_3p } 0 6 {A21R:U -> A24R:G: pairing parallel trans one_hbond Bs/Ww } 0 7 {A24R:G -> A21R:U: pairing parallel trans one_hbond Ww/Bs } 0 8 {A22R:U -> A23R:C: adjacent_5p } 0 9 {A23R:C -> A22R:U: adjacent_3p } 0 10 {A23R:C -> A24R:G: adjacent_5p } 0 11 {A24R:G -> A23R:C: adjacent_3p } 0 12 {A24R:G -> A25R:G: adjacent_5p outward } 0 13 {A25R:G -> A24R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 R8R:G 0 1 R9R:A 0 2 R10R:U 0 3 R11R:U 0 4 R12R:A 0 5 R13R:C 0 [Edges] 0 {R8R:G -> R9R:A: adjacent_5p upward } 0 1 {R9R:A -> R8R:G: adjacent_3p downward } 0 2 {R8R:G -> R13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {R13R:C -> R8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {R9R:A -> R10R:U: adjacent_5p } 0 5 {R10R:U -> R9R:A: adjacent_3p } 0 6 {R9R:A -> R11R:U: upward } 0 7 {R11R:U -> R9R:A: downward } 0 8 {R9R:A -> R13R:C: outward } 0 9 {R13R:C -> R9R:A: outward } 0 10 {R10R:U -> R11R:U: adjacent_5p } 0 11 {R11R:U -> R10R:U: adjacent_3p } 0 12 {R11R:U -> R12R:A: adjacent_5p } 0 13 {R12R:A -> R11R:U: adjacent_3p } 0 14 {R12R:A -> R13R:C: adjacent_5p } 0 15 {R13R:C -> R12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . 8 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . . . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 S8R:G 0 1 S9R:A 0 2 S10R:U 0 3 S11R:U 0 4 S12R:A 0 5 S13R:C 0 [Edges] 0 {S8R:G -> S9R:A: adjacent_5p upward } 0 1 {S9R:A -> S8R:G: adjacent_3p downward } 0 2 {S8R:G -> S13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {S13R:C -> S8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {S9R:A -> S10R:U: adjacent_5p } 0 5 {S10R:U -> S9R:A: adjacent_3p } 0 6 {S9R:A -> S11R:U: upward } 0 7 {S11R:U -> S9R:A: downward } 0 8 {S10R:U -> S11R:U: adjacent_5p } 0 9 {S11R:U -> S10R:U: adjacent_3p } 0 10 {S11R:U -> S12R:A: adjacent_5p } 0 11 {S12R:A -> S11R:U: adjacent_3p } 0 12 {S12R:A -> S13R:C: adjacent_5p } 0 13 {S13R:C -> S12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 B46R:C 0 1 B47R:G 0 2 B47.AR:C 0 3 B47.BR:A 0 4 B47.CR:A 0 5 B47.DR:G 0 [Edges] 0 {B46R:C -> B47R:G: adjacent_5p upward } 0 1 {B47R:G -> B46R:C: adjacent_3p downward } 0 2 {B46R:C -> B47.DR:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {B47.DR:G -> B46R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {B47R:G -> B47.AR:C: adjacent_5p } 0 5 {B47.AR:C -> B47R:G: adjacent_3p } 0 6 {B47R:G -> B47.DR:G: outward } 0 7 {B47.DR:G -> B47R:G: outward } 0 8 {B47.AR:C -> B47.BR:A: adjacent_5p upward } 0 9 {B47.BR:A -> B47.AR:C: adjacent_3p downward } 0 10 {B47.BR:A -> B47.CR:A: adjacent_5p upward } 0 11 {B47.CR:A -> B47.BR:A: adjacent_3p downward } 0 12 {B47.CR:A -> B47.DR:G: adjacent_5p } 0 13 {B47.DR:G -> B47.CR:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . [GraphModel] [Vertices] 0 E46R:C 0 1 E47R:G 0 2 E47.AR:C 0 3 E47.BR:A 0 4 E47.CR:A 0 5 E47.DR:G 0 [Edges] 0 {E46R:C -> E47R:G: adjacent_5p upward } 0 1 {E47R:G -> E46R:C: adjacent_3p downward } 0 2 {E46R:C -> E47.DR:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {E47.DR:G -> E46R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {E47R:G -> E47.AR:C: adjacent_5p } 0 5 {E47.AR:C -> E47R:G: adjacent_3p } 0 6 {E47R:G -> E47.DR:G: outward } 0 7 {E47.DR:G -> E47R:G: outward } 0 8 {E47.AR:C -> E47.BR:A: adjacent_5p upward } 0 9 {E47.BR:A -> E47.AR:C: adjacent_3p downward } 0 10 {E47.BR:A -> E47.CR:A: adjacent_5p upward } 0 11 {E47.CR:A -> E47.BR:A: adjacent_3p downward } 0 12 {E47.CR:A -> E47.DR:G: adjacent_5p } 0 13 {E47.DR:G -> E47.CR:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . 6 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . . . 11 . 12 5 3 7 . . 13 . MOLECULE: [GraphModel] [Vertices] 0 R8R:G 0 1 R9R:A 0 2 R10R:U 0 3 R11R:A 0 4 R12R:A 0 5 R13R:C 0 [Edges] 0 {R8R:G -> R9R:A: adjacent_5p upward } 0 1 {R9R:A -> R8R:G: adjacent_3p downward } 0 2 {R8R:G -> R13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {R13R:C -> R8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {R9R:A -> R10R:U: adjacent_5p } 0 5 {R10R:U -> R9R:A: adjacent_3p } 0 6 {R9R:A -> R11R:A: upward } 0 7 {R11R:A -> R9R:A: downward } 0 8 {R10R:U -> R11R:A: adjacent_5p } 0 9 {R11R:A -> R10R:U: adjacent_3p } 0 10 {R11R:A -> R12R:A: adjacent_5p } 0 11 {R12R:A -> R11R:A: adjacent_3p } 0 12 {R12R:A -> R13R:C: adjacent_5p } 0 13 {R13R:C -> R12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 S8R:G 0 1 S9R:A 0 2 S10R:U 0 3 S11R:A 0 4 S12R:A 0 5 S13R:C 0 [Edges] 0 {S8R:G -> S9R:A: adjacent_5p upward } 0 1 {S9R:A -> S8R:G: adjacent_3p downward } 0 2 {S8R:G -> S13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {S13R:C -> S8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {S9R:A -> S10R:U: adjacent_5p } 0 5 {S10R:U -> S9R:A: adjacent_3p } 0 6 {S9R:A -> S11R:A: upward } 0 7 {S11R:A -> S9R:A: downward } 0 8 {S10R:U -> S11R:A: adjacent_5p } 0 9 {S11R:A -> S10R:U: adjacent_3p } 0 10 {S11R:A -> S12R:A: adjacent_5p } 0 11 {S12R:A -> S11R:A: adjacent_3p } 0 12 {S12R:A -> S13R:C: adjacent_5p } 0 13 {S13R:C -> S12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 R8R:G 0 1 R9R:A 0 2 R10R:U 0 3 R11R:G 0 4 R12R:A 0 5 R13R:C 0 [Edges] 0 {R8R:G -> R9R:A: adjacent_5p upward } 0 1 {R9R:A -> R8R:G: adjacent_3p downward } 0 2 {R8R:G -> R13R:C: pairing antiparallel cis Ww/Ww } 0 3 {R13R:C -> R8R:G: pairing antiparallel cis Ww/Ww } 0 4 {R9R:A -> R10R:U: adjacent_5p } 0 5 {R10R:U -> R9R:A: adjacent_3p } 0 6 {R9R:A -> R11R:G: upward } 0 7 {R11R:G -> R9R:A: downward } 0 8 {R10R:U -> R11R:G: adjacent_5p } 0 9 {R11R:G -> R10R:U: adjacent_3p } 0 10 {R11R:G -> R12R:A: adjacent_5p } 0 11 {R12R:A -> R11R:G: adjacent_3p } 0 12 {R12R:A -> R13R:C: adjacent_5p } 0 13 {R13R:C -> R12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 S8R:G 0 1 S9R:A 0 2 S10R:U 0 3 S11R:G 0 4 S12R:A 0 5 S13R:C 0 [Edges] 0 {S8R:G -> S9R:A: adjacent_5p upward } 0 1 {S9R:A -> S8R:G: adjacent_3p downward } 0 2 {S8R:G -> S13R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {S13R:C -> S8R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {S9R:A -> S10R:U: adjacent_5p } 0 5 {S10R:U -> S9R:A: adjacent_3p } 0 6 {S9R:A -> S11R:G: upward } 0 7 {S11R:G -> S9R:A: downward } 0 8 {S10R:U -> S11R:G: adjacent_5p } 0 9 {S11R:G -> S10R:U: adjacent_3p } 0 10 {S11R:G -> S12R:A: adjacent_5p } 0 11 {S12R:A -> S11R:G: adjacent_3p } 0 12 {S12R:A -> S13R:C: adjacent_5p } 0 13 {S13R:C -> S12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 C33R:U 0 1 C34R:C 0 2 C35R:A 0 3 C36R:U 0 4 C37R:A 0 5 C38R:A 0 [Edges] 0 {C33R:U -> C34R:C: adjacent_5p } 0 1 {C34R:C -> C33R:U: adjacent_3p } 0 2 {C33R:U -> C38R:A: pairing antiparallel cis one_hbond 46 Ws/Wh } 0 3 {C38R:A -> C33R:U: pairing antiparallel cis one_hbond 46 Wh/Ws } 0 4 {C34R:C -> C35R:A: adjacent_5p upward } 0 5 {C35R:A -> C34R:C: adjacent_3p downward } 0 6 {C35R:A -> C36R:U: adjacent_5p } 0 7 {C36R:U -> C35R:A: adjacent_3p } 0 8 {C35R:A -> C38R:A: inward } 0 9 {C38R:A -> C35R:A: inward } 0 10 {C36R:U -> C37R:A: adjacent_5p } 0 11 {C37R:A -> C36R:U: adjacent_3p } 0 12 {C37R:A -> C38R:A: adjacent_5p } 0 13 {C38R:A -> C37R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . 8 3 . . 7 . 10 . 4 . . . 11 . 12 5 3 . 9 . 13 . [GraphModel] [Vertices] 0 D33R:U 0 1 D34R:C 0 2 D35R:A 0 3 D36R:U 0 4 D37R:A 0 5 D38R:A 0 [Edges] 0 {D33R:U -> D34R:C: adjacent_5p } 0 1 {D34R:C -> D33R:U: adjacent_3p } 0 2 {D33R:U -> D38R:A: pairing antiparallel trans one_hbond 46 Ws/Wh } 0 3 {D38R:A -> D33R:U: pairing antiparallel trans one_hbond 46 Wh/Ws } 0 4 {D34R:C -> D35R:A: adjacent_5p upward } 0 5 {D35R:A -> D34R:C: adjacent_3p downward } 0 6 {D35R:A -> D36R:U: adjacent_5p } 0 7 {D36R:U -> D35R:A: adjacent_3p } 0 8 {D35R:A -> D38R:A: inward } 0 9 {D38R:A -> D35R:A: inward } 0 10 {D36R:U -> D37R:A: adjacent_5p } 0 11 {D37R:A -> D36R:U: adjacent_3p } 0 12 {D37R:A -> D38R:A: adjacent_5p } 0 13 {D38R:A -> D37R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . 8 3 . . 7 . 10 . 4 . . . 11 . 12 5 3 . 9 . 13 . MOLECULE: [GraphModel] [Vertices] 0 A15R:G 0 1 A16R:U 0 2 A17R:U 0 3 A18R:C 0 4 A19R:G 0 5 A20R:C 0 [Edges] 0 {A15R:G -> A16R:U: adjacent_5p upward } 0 1 {A16R:U -> A15R:G: adjacent_3p downward } 0 2 {A15R:G -> A20R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A20R:C -> A15R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A16R:U -> A17R:U: adjacent_5p } 0 5 {A17R:U -> A16R:U: adjacent_3p } 0 6 {A16R:U -> A19R:G: pairing parallel trans one_hbond Ws/Ww } 0 7 {A19R:G -> A16R:U: pairing parallel trans one_hbond Ww/Ws } 0 8 {A17R:U -> A18R:C: adjacent_5p } 0 9 {A18R:C -> A17R:U: adjacent_3p } 0 10 {A18R:C -> A19R:G: adjacent_5p } 0 11 {A19R:G -> A18R:C: adjacent_3p } 0 12 {A19R:G -> A20R:C: adjacent_5p outward } 0 13 {A20R:C -> A19R:G: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 C11R:C 0 1 C12R:G 0 2 C13R:C 0 3 C14R:A 0 4 C15R:A 0 5 C16R:G 0 [Edges] 0 {C11R:C -> C12R:G: adjacent_5p upward } 0 1 {C12R:G -> C11R:C: adjacent_3p downward } 0 2 {C11R:C -> C16R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {C16R:G -> C11R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {C12R:G -> C13R:C: adjacent_5p } 0 5 {C13R:C -> C12R:G: adjacent_3p } 0 6 {C12R:G -> C15R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 7 {C15R:A -> C12R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 8 {C13R:C -> C14R:A: adjacent_5p upward } 0 9 {C14R:A -> C13R:C: adjacent_3p downward } 0 10 {C14R:A -> C15R:A: adjacent_5p upward } 0 11 {C15R:A -> C14R:A: adjacent_3p downward } 0 12 {C15R:A -> C16R:G: adjacent_5p upward } 0 13 {C16R:G -> C15R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 D11R:C 0 1 D12R:G 0 2 D13R:C 0 3 D14R:A 0 4 D15R:A 0 5 D16R:G 0 [Edges] 0 {D11R:C -> D12R:G: adjacent_5p upward } 0 1 {D12R:G -> D11R:C: adjacent_3p downward } 0 2 {D11R:C -> D16R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {D16R:G -> D11R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {D12R:G -> D13R:C: adjacent_5p } 0 5 {D13R:C -> D12R:G: adjacent_3p } 0 6 {D12R:G -> D15R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 7 {D15R:A -> D12R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 8 {D13R:C -> D14R:A: adjacent_5p upward } 0 9 {D14R:A -> D13R:C: adjacent_3p downward } 0 10 {D14R:A -> D15R:A: adjacent_5p upward } 0 11 {D15R:A -> D14R:A: adjacent_3p downward } 0 12 {D15R:A -> D16R:G: adjacent_5p upward } 0 13 {D16R:G -> D15R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 . 2 . 5 . 8 . . 3 . . 9 . 10 . 4 . 7 . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 A14R:U 0 1 A15R:G 0 2 A16R:A 0 3 A17R:A 0 4 A18R:A 0 5 A19R:G 0 [Edges] 0 {A14R:U -> A15R:G: adjacent_5p upward } 0 1 {A15R:G -> A14R:U: adjacent_3p downward } 0 2 {A14R:U -> A19R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {A19R:G -> A14R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {A15R:G -> A16R:A: adjacent_5p } 0 5 {A16R:A -> A15R:G: adjacent_3p } 0 6 {A16R:A -> A17R:A: adjacent_5p upward } 0 7 {A17R:A -> A16R:A: adjacent_3p downward } 0 8 {A17R:A -> A18R:A: adjacent_5p upward } 0 9 {A18R:A -> A17R:A: adjacent_3p downward } 0 10 {A18R:A -> A19R:G: adjacent_5p upward } 0 11 {A19R:G -> A18R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 11R:U 0 1 12R:U 0 2 13R:A 0 3 14R:G 0 4 15R:G 0 5 16R:U 0 [Edges] 0 {11R:U -> 12R:U: adjacent_5p } 0 1 {12R:U -> 11R:U: adjacent_3p } 0 2 {11R:U -> 16R:U: pairing antiparallel cis XVI Ws/Ww } 0 3 {16R:U -> 11R:U: pairing antiparallel cis XVI Ww/Ws } 0 4 {12R:U -> 13R:A: adjacent_5p } 0 5 {13R:A -> 12R:U: adjacent_3p } 0 6 {13R:A -> 14R:G: adjacent_5p upward } 0 7 {14R:G -> 13R:A: adjacent_3p downward } 0 8 {14R:G -> 15R:G: adjacent_5p } 0 9 {15R:G -> 14R:G: adjacent_3p } 0 10 {15R:G -> 16R:U: adjacent_5p } 0 11 {16R:U -> 15R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A86R:G 0 1 A87R:G 0 2 A88R:C 0 3 A89R:G 0 4 A89.AR:A 0 5 A90R:C 0 [Edges] 0 {A86R:G -> A87R:G: adjacent_5p upward } 0 1 {A87R:G -> A86R:G: adjacent_3p downward } 0 2 {A86R:G -> A90R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {A90R:C -> A86R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {A87R:G -> A88R:C: adjacent_5p } 0 5 {A88R:C -> A87R:G: adjacent_3p } 0 6 {A88R:C -> A89R:G: adjacent_5p } 0 7 {A89R:G -> A88R:C: adjacent_3p } 0 8 {A88R:C -> A89.AR:A: pairing parallel trans one_hbond Hh/Ww } 0 9 {A89.AR:A -> A88R:C: pairing parallel trans one_hbond Ww/Hh } 0 10 {A89R:G -> A89.AR:A: adjacent_5p } 0 11 {A89.AR:A -> A89R:G: adjacent_3p } 0 12 {A89.AR:A -> A90R:C: adjacent_5p upward } 0 13 {A90R:C -> A89.AR:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 8 . 3 . . 7 . 10 . 4 . . 9 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 B86R:G 0 1 B87R:G 0 2 B88R:C 0 3 B89R:G 0 4 B89.AR:A 0 5 B90R:C 0 [Edges] 0 {B86R:G -> B87R:G: adjacent_5p upward } 0 1 {B87R:G -> B86R:G: adjacent_3p downward } 0 2 {B86R:G -> B90R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {B90R:C -> B86R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {B87R:G -> B88R:C: adjacent_5p } 0 5 {B88R:C -> B87R:G: adjacent_3p } 0 6 {B88R:C -> B89R:G: adjacent_5p } 0 7 {B89R:G -> B88R:C: adjacent_3p } 0 8 {B89R:G -> B89.AR:A: adjacent_5p } 0 9 {B89.AR:A -> B89R:G: adjacent_3p } 0 10 {B89.AR:A -> B90R:C: adjacent_5p upward } 0 11 {B90R:C -> B89.AR:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . . . 2 . 5 . 6 . . 3 . . 7 . 8 . 4 . . . 9 . 10 5 3 . . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A13R:C 0 1 A14R:G 0 2 A15R:A 0 3 A16R:G 0 4 A17R:A 0 5 A18R:G 0 [Edges] 0 {A13R:C -> A14R:G: adjacent_5p upward } 0 1 {A14R:G -> A13R:C: adjacent_3p downward } 0 2 {A13R:C -> A18R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A18R:G -> A13R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A14R:G -> A15R:A: adjacent_5p } 0 5 {A15R:A -> A14R:G: adjacent_3p } 0 6 {A14R:G -> A17R:A: pairing antiparallel trans XI Ss/Hh } 0 7 {A17R:A -> A14R:G: pairing antiparallel trans XI Hh/Ss } 0 8 {A14R:G -> A18R:G: outward } 0 9 {A18R:G -> A14R:G: outward } 0 10 {A15R:A -> A16R:G: adjacent_5p upward } 0 11 {A16R:G -> A15R:A: adjacent_3p downward } 0 12 {A16R:G -> A17R:A: adjacent_5p upward } 0 13 {A17R:A -> A16R:G: adjacent_3p downward } 0 14 {A17R:A -> A18R:G: adjacent_5p } 0 15 {A18R:G -> A17R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 . 6 8 2 . 5 . 10 . . 3 . . 11 . 12 . 4 . 7 . 13 . 14 5 3 9 . . 15 . MOLECULE: [GraphModel] [Vertices] 0 R7R:G 0 1 R8R:A 0 2 R9R:U 0 3 R10R:C 0 4 R11R:A 0 5 R12R:C 0 [Edges] 0 {R7R:G -> R8R:A: adjacent_5p upward } 0 1 {R8R:A -> R7R:G: adjacent_3p downward } 0 2 {R7R:G -> R12R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {R12R:C -> R7R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {R8R:A -> R9R:U: adjacent_5p } 0 5 {R9R:U -> R8R:A: adjacent_3p } 0 6 {R8R:A -> R10R:C: upward } 0 7 {R10R:C -> R8R:A: downward } 0 8 {R9R:U -> R10R:C: adjacent_5p } 0 9 {R10R:C -> R9R:U: adjacent_3p } 0 10 {R10R:C -> R11R:A: adjacent_5p } 0 11 {R11R:A -> R10R:C: adjacent_3p } 0 12 {R11R:A -> R12R:C: adjacent_5p } 0 13 {R12R:C -> R11R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . [GraphModel] [Vertices] 0 S7R:G 0 1 S8R:A 0 2 S9R:U 0 3 S10R:C 0 4 S11R:A 0 5 S12R:C 0 [Edges] 0 {S7R:G -> S8R:A: adjacent_5p upward } 0 1 {S8R:A -> S7R:G: adjacent_3p downward } 0 2 {S7R:G -> S12R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {S12R:C -> S7R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {S8R:A -> S9R:U: adjacent_5p } 0 5 {S9R:U -> S8R:A: adjacent_3p } 0 6 {S8R:A -> S10R:C: upward } 0 7 {S10R:C -> S8R:A: downward } 0 8 {S9R:U -> S10R:C: adjacent_5p } 0 9 {S10R:C -> S9R:U: adjacent_3p } 0 10 {S10R:C -> S11R:A: adjacent_5p } 0 11 {S11R:A -> S10R:C: adjacent_3p } 0 12 {S11R:A -> S12R:C: adjacent_5p } 0 13 {S12R:C -> S11R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . . 2 . 5 . 8 . . 3 . 7 9 . 10 . 4 . . . 11 . 12 5 3 . . . 13 . MOLECULE: [GraphModel] [Vertices] 0 R5R:C 0 1 R6R:A 0 2 R7R:A 0 3 R8R:C 0 4 R9R:A 0 5 R10R:G 0 [Edges] 0 {R5R:C -> R6R:A: adjacent_5p upward } 0 1 {R6R:A -> R5R:C: adjacent_3p downward } 0 2 {R5R:C -> R10R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {R10R:G -> R5R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {R6R:A -> R7R:A: adjacent_5p } 0 5 {R7R:A -> R6R:A: adjacent_3p } 0 6 {R6R:A -> R8R:C: upward } 0 7 {R8R:C -> R6R:A: downward } 0 8 {R6R:A -> R10R:G: outward } 0 9 {R10R:G -> R6R:A: outward } 0 10 {R7R:A -> R8R:C: adjacent_5p } 0 11 {R8R:C -> R7R:A: adjacent_3p } 0 12 {R8R:C -> R9R:A: adjacent_5p } 0 13 {R9R:A -> R8R:C: adjacent_3p } 0 14 {R9R:A -> R10R:G: adjacent_5p } 0 15 {R10R:G -> R9R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . 8 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . . . 13 . 14 5 3 9 . . 15 . [GraphModel] [Vertices] 0 S5R:C 0 1 S6R:A 0 2 S7R:A 0 3 S8R:C 0 4 S9R:A 0 5 S10R:G 0 [Edges] 0 {S5R:C -> S6R:A: adjacent_5p upward } 0 1 {S6R:A -> S5R:C: adjacent_3p downward } 0 2 {S5R:C -> S10R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {S10R:G -> S5R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {S6R:A -> S7R:A: adjacent_5p } 0 5 {S7R:A -> S6R:A: adjacent_3p } 0 6 {S6R:A -> S8R:C: upward } 0 7 {S8R:C -> S6R:A: downward } 0 8 {S6R:A -> S10R:G: outward } 0 9 {S10R:G -> S6R:A: outward } 0 10 {S7R:A -> S8R:C: adjacent_5p } 0 11 {S8R:C -> S7R:A: adjacent_3p } 0 12 {S8R:C -> S9R:A: adjacent_5p } 0 13 {S9R:A -> S8R:C: adjacent_3p } 0 14 {S9R:A -> S10R:G: adjacent_5p } 0 15 {S10R:G -> S9R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 5 0 . 0 . . . 2 1 1 . 4 6 . 8 2 . 5 . 10 . . 3 . 7 11 . 12 . 4 . . . 13 . 14 5 3 9 . . 15 .