MOLECULE: [GraphModel] [Vertices] 0 8R:G 0 1 9R:A 0 2 10R:A 0 3 11R:A 0 [Edges] 0 {8R:G -> 9R:A: adjacent_5p } 0 1 {9R:A -> 8R:G: adjacent_3p } 0 2 {8R:G -> 11R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {11R:A -> 8R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {9R:A -> 10R:A: adjacent_5p upward } 0 5 {10R:A -> 9R:A: adjacent_3p downward } 0 6 {10R:A -> 11R:A: adjacent_5p upward } 0 7 {11R:A -> 10R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 7R:A 0 1 8R:G 0 2 9R:A 0 3 10R:A 0 [Edges] 0 {7R:A -> 8R:G: adjacent_5p } 0 1 {8R:G -> 7R:A: adjacent_3p } 0 2 {7R:A -> 10R:A: pairing antiparallel cis one_hbond 40 Ss/Wh } 0 3 {10R:A -> 7R:A: pairing antiparallel cis one_hbond 40 Wh/Ss } 0 4 {8R:G -> 9R:A: adjacent_5p } 0 5 {9R:A -> 8R:G: adjacent_3p } 0 6 {9R:A -> 10R:A: adjacent_5p upward } 0 7 {10R:A -> 9R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 R33R:U 0 1 R34R:G 0 2 R35R:C 0 3 R36R:A 0 [Edges] 0 {R33R:U -> R34R:G: adjacent_5p } 0 1 {R34R:G -> R33R:U: adjacent_3p } 0 2 {R33R:U -> R36R:A: pairing antiparallel trans one_hbond Ws/C8 } 0 3 {R36R:A -> R33R:U: pairing antiparallel trans one_hbond C8/Ws } 0 4 {R34R:G -> R35R:C: adjacent_5p upward } 0 5 {R35R:C -> R34R:G: adjacent_3p downward } 0 6 {R35R:C -> R36R:A: adjacent_5p } 0 7 {R36R:A -> R35R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A17R:U 0 1 A18R:U 0 2 A19R:C 0 3 A20R:G 0 [Edges] 0 {A17R:U -> A18R:U: adjacent_5p } 0 1 {A18R:U -> A17R:U: adjacent_3p } 0 2 {A17R:U -> A19R:C: upward } 0 3 {A19R:C -> A17R:U: downward } 0 4 {A17R:U -> A20R:G: pairing parallel trans one_hbond 87 Bs/Ww } 0 5 {A20R:G -> A17R:U: pairing parallel trans one_hbond 87 Ww/Bs } 0 6 {A18R:U -> A19R:C: adjacent_5p } 0 7 {A19R:C -> A18R:U: adjacent_3p } 0 8 {A19R:C -> A20R:G: adjacent_5p } 0 9 {A20R:G -> A19R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 A12R:U 0 1 A13R:U 0 2 A14R:C 0 3 A15R:G 0 [Edges] 0 {A12R:U -> A13R:U: adjacent_5p } 0 1 {A13R:U -> A12R:U: adjacent_3p } 0 2 {A12R:U -> A14R:C: upward } 0 3 {A14R:C -> A12R:U: downward } 0 4 {A12R:U -> A15R:G: pairing parallel trans 87 Bs/Ww } 0 5 {A15R:G -> A12R:U: pairing parallel trans 87 Ww/Bs } 0 6 {A13R:U -> A14R:C: adjacent_5p } 0 7 {A14R:C -> A13R:U: adjacent_3p } 0 8 {A14R:C -> A15R:G: adjacent_5p } 0 9 {A15R:G -> A14R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 A18R:G 0 1 A19R:C 0 2 A20R:A 0 3 A21R:A 0 [Edges] 0 {A18R:G -> A19R:C: adjacent_5p } 0 1 {A19R:C -> A18R:G: adjacent_3p } 0 2 {A18R:G -> A21R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A21R:A -> A18R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A19R:C -> A20R:A: adjacent_5p } 0 5 {A20R:A -> A19R:C: adjacent_3p } 0 6 {A20R:A -> A21R:A: adjacent_5p upward } 0 7 {A21R:A -> A20R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A22R:G 0 1 A23R:G 0 2 A24R:A 0 3 A25R:A 0 [Edges] 0 {A22R:G -> A23R:G: adjacent_5p } 0 1 {A23R:G -> A22R:G: adjacent_3p } 0 2 {A22R:G -> A25R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A25R:A -> A22R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A23R:G -> A24R:A: adjacent_5p upward } 0 5 {A24R:A -> A23R:G: adjacent_3p downward } 0 6 {A24R:A -> A25R:A: adjacent_5p upward } 0 7 {A25R:A -> A24R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 B284R:U 0 1 B285R:U 0 2 B291R:C 0 3 B292R:G 0 [Edges] 0 {B284R:U -> B285R:U: adjacent_5p } 0 1 {B285R:U -> B284R:U: adjacent_3p } 0 2 {B284R:U -> B292R:G: pairing parallel trans one_hbond Ss/Ws } 0 3 {B292R:G -> B284R:U: pairing parallel trans one_hbond Ws/Ss } 0 4 {B285R:U -> B291R:C: adjacent_5p } 0 5 {B291R:C -> B285R:U: adjacent_3p } 0 6 {B291R:C -> B292R:G: adjacent_5p } 0 7 {B292R:G -> B291R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 B154R:G 0 1 B155R:A 0 2 B156R:A 0 3 B157R:A 0 [Edges] 0 {B154R:G -> B155R:A: adjacent_5p } 0 1 {B155R:A -> B154R:G: adjacent_3p } 0 2 {B154R:G -> B157R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 3 {B157R:A -> B154R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 4 {B155R:A -> B156R:A: adjacent_5p upward } 0 5 {B156R:A -> B155R:A: adjacent_3p downward } 0 6 {B156R:A -> B157R:A: adjacent_5p upward } 0 7 {B157R:A -> B156R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A18R:G 0 1 A19R:C 0 2 A20R:C 0 3 A21R:A 0 [Edges] 0 {A18R:G -> A19R:C: adjacent_5p upward } 0 1 {A19R:C -> A18R:G: adjacent_3p downward } 0 2 {A18R:G -> A21R:A: pairing antiparallel cis one_hbond 55 Sw/Ww } 0 3 {A21R:A -> A18R:G: pairing antiparallel cis one_hbond 55 Ww/Sw } 0 4 {A19R:C -> A20R:C: adjacent_5p } 0 5 {A20R:C -> A19R:C: adjacent_3p } 0 6 {A20R:C -> A21R:A: adjacent_5p } 0 7 {A21R:A -> A20R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 13R:U 0 1 14R:U 0 2 15R:C 0 3 16R:G 0 [Edges] 0 {13R:U -> 14R:U: adjacent_5p } 0 1 {14R:U -> 13R:U: adjacent_3p } 0 2 {13R:U -> 15R:C: upward } 0 3 {15R:C -> 13R:U: downward } 0 4 {13R:U -> 16R:G: pairing parallel trans one_hbond Bs/Ww } 0 5 {16R:G -> 13R:U: pairing parallel trans one_hbond Ww/Bs } 0 6 {14R:U -> 15R:C: adjacent_5p } 0 7 {15R:C -> 14R:U: adjacent_3p } 0 8 {15R:C -> 16R:G: adjacent_5p } 0 9 {16R:G -> 15R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 C7R:C 0 1 C8R:U 0 2 C9R:A 0 3 C10R:G 0 [Edges] 0 {C7R:C -> C8R:U: adjacent_5p } 0 1 {C8R:U -> C7R:C: adjacent_3p } 0 2 {C7R:C -> C9R:A: upward } 0 3 {C9R:A -> C7R:C: downward } 0 4 {C7R:C -> C10R:G: pairing parallel trans 129 Bs/Ww } 0 5 {C10R:G -> C7R:C: pairing parallel trans 129 Ww/Bs } 0 6 {C8R:U -> C9R:A: adjacent_5p } 0 7 {C9R:A -> C8R:U: adjacent_3p } 0 8 {C9R:A -> C10R:G: adjacent_5p } 0 9 {C10R:G -> C9R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 B14R:U 0 1 B15R:U 0 2 B16R:C 0 3 B17R:G 0 [Edges] 0 {B14R:U -> B15R:U: adjacent_5p } 0 1 {B15R:U -> B14R:U: adjacent_3p } 0 2 {B14R:U -> B17R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {B17R:G -> B14R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {B15R:U -> B16R:C: adjacent_5p } 0 5 {B16R:C -> B15R:U: adjacent_3p } 0 6 {B16R:C -> B17R:G: adjacent_5p upward } 0 7 {B17R:G -> B16R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A8R:G 0 1 A9R:A 0 2 A10R:C 0 3 A11R:G 0 [Edges] 0 {A8R:G -> A9R:A: adjacent_5p } 0 1 {A9R:A -> A8R:G: adjacent_3p } 0 2 {A8R:G -> A11R:G: pairing antiparallel trans one_hbond 108 Sw/Hh } 0 3 {A11R:G -> A8R:G: pairing antiparallel trans one_hbond 108 Hh/Sw } 0 4 {A9R:A -> A10R:C: adjacent_5p upward } 0 5 {A10R:C -> A9R:A: adjacent_3p downward } 0 6 {A10R:C -> A11R:G: adjacent_5p upward } 0 7 {A11R:G -> A10R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 B8R:G 0 1 B9R:A 0 2 B10R:C 0 3 B11R:G 0 [Edges] 0 {B8R:G -> B9R:A: adjacent_5p } 0 1 {B9R:A -> B8R:G: adjacent_3p } 0 2 {B8R:G -> B10R:C: pairing antiparallel trans one_hbond Ss/Hh } 0 3 {B10R:C -> B8R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 4 {B8R:G -> B11R:G: pairing antiparallel trans one_hbond 108 Sw/Hh } 0 5 {B11R:G -> B8R:G: pairing antiparallel trans one_hbond 108 Hh/Sw } 0 6 {B9R:A -> B10R:C: adjacent_5p upward } 0 7 {B10R:C -> B9R:A: adjacent_3p downward } 0 8 {B10R:C -> B11R:G: adjacent_5p upward } 0 9 {B11R:G -> B10R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 A13R:U 0 1 A14R:U 0 2 A15R:C 0 3 A16R:G 0 [Edges] 0 {A13R:U -> A14R:U: adjacent_5p } 0 1 {A14R:U -> A13R:U: adjacent_3p } 0 2 {A13R:U -> A16R:G: pairing parallel trans one_hbond Ss/Ww } 0 3 {A16R:G -> A13R:U: pairing parallel trans one_hbond Ww/Ss } 0 4 {A14R:U -> A15R:C: adjacent_5p } 0 5 {A15R:C -> A14R:U: adjacent_3p } 0 6 {A15R:C -> A16R:G: adjacent_5p } 0 7 {A16R:G -> A15R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A14R:U 0 1 A15R:C 0 2 A16R:G 0 3 A17R:G 0 [Edges] 0 {A14R:U -> A15R:C: adjacent_5p } 0 1 {A15R:C -> A14R:U: adjacent_3p } 0 2 {A14R:U -> A17R:G: pairing parallel trans one_hbond 89 Hw/Sw } 0 3 {A17R:G -> A14R:U: pairing parallel trans one_hbond 89 Sw/Hw } 0 4 {A15R:C -> A16R:G: adjacent_5p } 0 5 {A16R:G -> A15R:C: adjacent_3p } 0 6 {A16R:G -> A17R:G: adjacent_5p } 0 7 {A17R:G -> A16R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A6R:G 0 1 A7R:A 0 2 A8R:U 0 3 A9R:A 0 [Edges] 0 {A6R:G -> A7R:A: adjacent_5p upward } 0 1 {A7R:A -> A6R:G: adjacent_3p downward } 0 2 {A6R:G -> A9R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A9R:A -> A6R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A7R:A -> A8R:U: adjacent_5p } 0 5 {A8R:U -> A7R:A: adjacent_3p } 0 6 {A8R:U -> A9R:A: adjacent_5p } 0 7 {A9R:A -> A8R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A2249R:G 0 1 A2250R:G 0 2 A2251R:G 0 3 A2252R:A 0 [Edges] 0 {A2249R:G -> A2250R:G: adjacent_5p } 0 1 {A2250R:G -> A2249R:G: adjacent_3p } 0 2 {A2249R:G -> A2252R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A2252R:A -> A2249R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A2250R:G -> A2251R:G: adjacent_5p upward } 0 5 {A2251R:G -> A2250R:G: adjacent_3p downward } 0 6 {A2251R:G -> A2252R:A: adjacent_5p upward } 0 7 {A2252R:A -> A2251R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A2412R:G 0 1 A2413R:A 0 2 A2414R:A 0 3 A2415R:A 0 [Edges] 0 {A2412R:G -> A2413R:A: adjacent_5p } 0 1 {A2413R:A -> A2412R:G: adjacent_3p } 0 2 {A2412R:G -> A2415R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A2415R:A -> A2412R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A2413R:A -> A2414R:A: adjacent_5p upward } 0 5 {A2414R:A -> A2413R:A: adjacent_3p downward } 0 6 {A2414R:A -> A2415R:A: adjacent_5p upward } 0 7 {A2415R:A -> A2414R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A2630R:G 0 1 A2631R:U 0 2 A2632R:G 0 3 A2633R:A 0 [Edges] 0 {A2630R:G -> A2631R:U: adjacent_5p } 0 1 {A2631R:U -> A2630R:G: adjacent_3p } 0 2 {A2630R:G -> A2633R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A2633R:A -> A2630R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A2631R:U -> A2632R:G: adjacent_5p upward } 0 5 {A2632R:G -> A2631R:U: adjacent_3p downward } 0 6 {A2632R:G -> A2633R:A: adjacent_5p upward } 0 7 {A2633R:A -> A2632R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 D591R:G 0 1 D592R:A 0 2 D593R:A 0 3 D594R:A 0 [Edges] 0 {D591R:G -> D592R:A: adjacent_5p } 0 1 {D592R:A -> D591R:G: adjacent_3p } 0 2 {D591R:G -> D594R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {D594R:A -> D591R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {D592R:A -> D593R:A: adjacent_5p upward } 0 5 {D593R:A -> D592R:A: adjacent_3p downward } 0 6 {D593R:A -> D594R:A: adjacent_5p upward } 0 7 {D594R:A -> D593R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 E727R:G 0 1 E728R:A 0 2 E729R:A 0 3 E730R:G 0 [Edges] 0 {E727R:G -> E728R:A: adjacent_5p } 0 1 {E728R:A -> E727R:G: adjacent_3p } 0 2 {E727R:G -> E730R:G: pairing antiparallel trans one_hbond 108 Sw/Hh } 0 3 {E730R:G -> E727R:G: pairing antiparallel trans one_hbond 108 Hh/Sw } 0 4 {E728R:A -> E729R:A: adjacent_5p upward } 0 5 {E729R:A -> E728R:A: adjacent_3p downward } 0 6 {E729R:A -> E730R:G: adjacent_5p upward } 0 7 {E730R:G -> E729R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 J727R:G 0 1 J728R:A 0 2 J729R:A 0 3 J730R:G 0 [Edges] 0 {J727R:G -> J728R:A: adjacent_5p } 0 1 {J728R:A -> J727R:G: adjacent_3p } 0 2 {J727R:G -> J730R:G: pairing antiparallel trans one_hbond 108 Sw/Hh } 0 3 {J730R:G -> J727R:G: pairing antiparallel trans one_hbond 108 Hh/Sw } 0 4 {J728R:A -> J729R:A: adjacent_5p upward } 0 5 {J729R:A -> J728R:A: adjacent_3p downward } 0 6 {J729R:A -> J730R:G: adjacent_5p upward } 0 7 {J730R:G -> J729R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 9R:U 0 1 10R:U 0 2 11R:C 0 3 12R:G 0 [Edges] 0 {9R:U -> 10R:U: adjacent_5p } 0 1 {10R:U -> 9R:U: adjacent_3p } 0 2 {9R:U -> 12R:G: pairing parallel trans 87 Bs/Ww } 0 3 {12R:G -> 9R:U: pairing parallel trans 87 Ww/Bs } 0 4 {10R:U -> 11R:C: adjacent_5p } 0 5 {11R:C -> 10R:U: adjacent_3p } 0 6 {11R:C -> 12R:G: adjacent_5p } 0 7 {12R:G -> 11R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A21.LR:G 0 1 A22.LR:A 0 2 A23.LR:A 0 3 A24.LR:A 0 [Edges] 0 {A21.LR:G -> A22.LR:A: adjacent_5p } 0 1 {A22.LR:A -> A21.LR:G: adjacent_3p } 0 2 {A21.LR:G -> A24.LR:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A24.LR:A -> A21.LR:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A22.LR:A -> A23.LR:A: adjacent_5p upward } 0 5 {A23.LR:A -> A22.LR:A: adjacent_3p downward } 0 6 {A23.LR:A -> A24.LR:A: adjacent_5p upward } 0 7 {A24.LR:A -> A23.LR:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 C21.LR:G 0 1 C22.LR:A 0 2 C23.LR:A 0 3 C24.LR:A 0 [Edges] 0 {C21.LR:G -> C22.LR:A: adjacent_5p } 0 1 {C22.LR:A -> C21.LR:G: adjacent_3p } 0 2 {C21.LR:G -> C24.LR:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {C24.LR:A -> C21.LR:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {C22.LR:A -> C23.LR:A: adjacent_5p upward } 0 5 {C23.LR:A -> C22.LR:A: adjacent_3p downward } 0 6 {C23.LR:A -> C24.LR:A: adjacent_5p upward } 0 7 {C24.LR:A -> C23.LR:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 E21.LR:G 0 1 E22.LR:A 0 2 E23.LR:A 0 3 E24.LR:A 0 [Edges] 0 {E21.LR:G -> E22.LR:A: adjacent_5p } 0 1 {E22.LR:A -> E21.LR:G: adjacent_3p } 0 2 {E21.LR:G -> E24.LR:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {E24.LR:A -> E21.LR:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {E22.LR:A -> E23.LR:A: adjacent_5p upward } 0 5 {E23.LR:A -> E22.LR:A: adjacent_3p downward } 0 6 {E23.LR:A -> E24.LR:A: adjacent_5p upward } 0 7 {E24.LR:A -> E23.LR:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A15R:G 0 1 A16R:C 0 2 A17R:A 0 3 A18R:A 0 [Edges] 0 {A15R:G -> A16R:C: adjacent_5p } 0 1 {A16R:C -> A15R:G: adjacent_3p } 0 2 {A15R:G -> A18R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 3 {A18R:A -> A15R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 4 {A16R:C -> A17R:A: adjacent_5p } 0 5 {A17R:A -> A16R:C: adjacent_3p } 0 6 {A17R:A -> A18R:A: adjacent_5p upward } 0 7 {A18R:A -> A17R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A4R:C 0 1 A5R:G 0 2 A6R:U 0 3 A7R:G 0 [Edges] 0 {A4R:C -> A5R:G: adjacent_5p } 0 1 {A5R:G -> A4R:C: adjacent_3p } 0 2 {A4R:C -> A7R:G: pairing antiparallel cis one_hbond Hw/Hw } 0 3 {A7R:G -> A4R:C: pairing antiparallel cis one_hbond Hw/Hw } 0 4 {A5R:G -> A6R:U: adjacent_5p upward } 0 5 {A6R:U -> A5R:G: adjacent_3p downward } 0 6 {A6R:U -> A7R:G: adjacent_5p upward } 0 7 {A7R:G -> A6R:U: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A7R:U 0 1 A8R:G 0 2 A9R:A 0 3 A10R:A 0 [Edges] 0 {A7R:U -> A8R:G: adjacent_5p upward } 0 1 {A8R:G -> A7R:U: adjacent_3p downward } 0 2 {A7R:U -> A10R:A: pairing antiparallel trans one_hbond Bs/Hw } 0 3 {A10R:A -> A7R:U: pairing antiparallel trans one_hbond Hw/Bs } 0 4 {A8R:G -> A9R:A: adjacent_5p } 0 5 {A9R:A -> A8R:G: adjacent_3p } 0 6 {A9R:A -> A10R:A: adjacent_5p outward } 0 7 {A10R:A -> A9R:A: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A7R:G 0 1 A8R:A 0 2 A9R:G 0 3 A10R:A 0 [Edges] 0 {A7R:G -> A8R:A: adjacent_5p } 0 1 {A8R:A -> A7R:G: adjacent_3p } 0 2 {A7R:G -> A10R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A10R:A -> A7R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A8R:A -> A9R:G: adjacent_5p upward } 0 5 {A9R:G -> A8R:A: adjacent_3p downward } 0 6 {A9R:G -> A10R:A: adjacent_5p upward } 0 7 {A10R:A -> A9R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A16R:G 0 1 A17R:A 0 2 A18R:G 0 3 A19R:A 0 [Edges] 0 {A16R:G -> A17R:A: adjacent_5p } 0 1 {A17R:A -> A16R:G: adjacent_3p } 0 2 {A16R:G -> A19R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A19R:A -> A16R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A17R:A -> A18R:G: adjacent_5p upward } 0 5 {A18R:G -> A17R:A: adjacent_3p downward } 0 6 {A18R:G -> A19R:A: adjacent_5p upward } 0 7 {A19R:A -> A18R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A6R:A 0 1 A7R:G 0 2 A8R:A 0 3 A9R:A 0 [Edges] 0 {A6R:A -> A7R:G: adjacent_5p inward } 0 1 {A7R:G -> A6R:A: adjacent_3p inward } 0 2 {A6R:A -> A9R:A: pairing antiparallel trans 41 Ss/Hh } 0 3 {A9R:A -> A6R:A: pairing antiparallel trans 41 Hh/Ss } 0 4 {A7R:G -> A8R:A: adjacent_5p } 0 5 {A8R:A -> A7R:G: adjacent_3p } 0 6 {A8R:A -> A9R:A: adjacent_5p } 0 7 {A9R:A -> A8R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A10R:A 0 1 A11R:G 0 2 A12R:U 0 3 A13R:C 0 [Edges] 0 {A10R:A -> A11R:G: adjacent_5p inward } 0 1 {A11R:G -> A10R:A: adjacent_3p inward } 0 2 {A10R:A -> A13R:C: pairing antiparallel trans one_hbond 72 Ss/Hw } 0 3 {A13R:C -> A10R:A: pairing antiparallel trans one_hbond 72 Hw/Ss } 0 4 {A11R:G -> A12R:U: adjacent_5p } 0 5 {A12R:U -> A11R:G: adjacent_3p } 0 6 {A12R:U -> A13R:C: adjacent_5p } 0 7 {A13R:C -> A12R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A10R:A 0 1 A11R:G 0 2 A12R:A 0 3 A13R:A 0 [Edges] 0 {A10R:A -> A11R:G: adjacent_5p inward } 0 1 {A11R:G -> A10R:A: adjacent_3p inward } 0 2 {A10R:A -> A13R:A: pairing antiparallel trans one_hbond 40 Ss/Wh } 0 3 {A13R:A -> A10R:A: pairing antiparallel trans one_hbond 40 Wh/Ss } 0 4 {A11R:G -> A12R:A: adjacent_5p } 0 5 {A12R:A -> A11R:G: adjacent_3p } 0 6 {A12R:A -> A13R:A: adjacent_5p upward } 0 7 {A13R:A -> A12R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A15R:U 0 1 A16R:U 0 2 A17R:C 0 3 A18R:G 0 [Edges] 0 {A15R:U -> A16R:U: adjacent_5p } 0 1 {A16R:U -> A15R:U: adjacent_3p } 0 2 {A15R:U -> A17R:C: upward } 0 3 {A17R:C -> A15R:U: downward } 0 4 {A15R:U -> A18R:G: pairing parallel trans one_hbond Bs/Ww } 0 5 {A18R:G -> A15R:U: pairing parallel trans one_hbond Ww/Bs } 0 6 {A16R:U -> A17R:C: adjacent_5p } 0 7 {A17R:C -> A16R:U: adjacent_3p } 0 8 {A17R:C -> A18R:G: adjacent_5p } 0 9 {A18R:G -> A17R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 B9R:U 0 1 B10R:U 0 2 B11R:C 0 3 B12R:G 0 [Edges] 0 {B9R:U -> B10R:U: adjacent_5p } 0 1 {B10R:U -> B9R:U: adjacent_3p } 0 2 {B9R:U -> B11R:C: upward } 0 3 {B11R:C -> B9R:U: downward } 0 4 {B9R:U -> B12R:G: pairing parallel trans 87 Bs/Ww } 0 5 {B12R:G -> B9R:U: pairing parallel trans 87 Ww/Bs } 0 6 {B10R:U -> B11R:C: adjacent_5p } 0 7 {B11R:C -> B10R:U: adjacent_3p } 0 8 {B11R:C -> B12R:G: adjacent_5p } 0 9 {B12R:G -> B11R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 A34R:G 0 1 A35R:A 0 2 A36R:A 0 3 A37R:A 0 [Edges] 0 {A34R:G -> A35R:A: adjacent_5p } 0 1 {A35R:A -> A34R:G: adjacent_3p } 0 2 {A34R:G -> A37R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A37R:A -> A34R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A35R:A -> A36R:A: adjacent_5p upward } 0 5 {A36R:A -> A35R:A: adjacent_3p downward } 0 6 {A36R:A -> A37R:A: adjacent_5p upward } 0 7 {A37R:A -> A36R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 C14R:U 0 1 C15R:A 0 2 C16R:C 0 3 C17R:G 0 [Edges] 0 {C14R:U -> C15R:A: adjacent_5p } 0 1 {C15R:A -> C14R:U: adjacent_3p } 0 2 {C14R:U -> C16R:C: upward } 0 3 {C16R:C -> C14R:U: downward } 0 4 {C14R:U -> C17R:G: pairing parallel trans 87 Bs/Ww } 0 5 {C17R:G -> C14R:U: pairing parallel trans 87 Ww/Bs } 0 6 {C15R:A -> C16R:C: adjacent_5p } 0 7 {C16R:C -> C15R:A: adjacent_3p } 0 8 {C16R:C -> C17R:G: adjacent_5p } 0 9 {C17R:G -> C16R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 A13R:G 0 1 A14R:G 0 2 A15R:A 0 3 A16R:G 0 [Edges] 0 {A13R:G -> A14R:G: adjacent_5p } 0 1 {A14R:G -> A13R:G: adjacent_3p } 0 2 {A13R:G -> A16R:G: pairing antiparallel cis one_hbond 108 Sw/Hh } 0 3 {A16R:G -> A13R:G: pairing antiparallel cis one_hbond 108 Hh/Sw } 0 4 {A14R:G -> A15R:A: adjacent_5p upward } 0 5 {A15R:A -> A14R:G: adjacent_3p downward } 0 6 {A15R:A -> A16R:G: adjacent_5p upward } 0 7 {A16R:G -> A15R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A150R:G 0 1 A151R:A 0 2 A152R:A 0 3 A153R:A 0 [Edges] 0 {A150R:G -> A151R:A: adjacent_5p } 0 1 {A151R:A -> A150R:G: adjacent_3p } 0 2 {A150R:G -> A153R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A153R:A -> A150R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A151R:A -> A152R:A: adjacent_5p upward } 0 5 {A152R:A -> A151R:A: adjacent_3p downward } 0 6 {A152R:A -> A153R:A: adjacent_5p upward } 0 7 {A153R:A -> A152R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 B150R:G 0 1 B151R:A 0 2 B152R:A 0 3 B153R:A 0 [Edges] 0 {B150R:G -> B151R:A: adjacent_5p } 0 1 {B151R:A -> B150R:G: adjacent_3p } 0 2 {B150R:G -> B153R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {B153R:A -> B150R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {B151R:A -> B152R:A: adjacent_5p upward } 0 5 {B152R:A -> B151R:A: adjacent_3p downward } 0 6 {B152R:A -> B153R:A: adjacent_5p upward } 0 7 {B153R:A -> B152R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 B75R:G 0 1 B76R:A 0 2 B77R:A 0 3 B78R:A 0 [Edges] 0 {B75R:G -> B76R:A: adjacent_5p } 0 1 {B76R:A -> B75R:G: adjacent_3p } 0 2 {B75R:G -> B78R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {B78R:A -> B75R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {B76R:A -> B77R:A: adjacent_5p outward } 0 5 {B77R:A -> B76R:A: adjacent_3p outward } 0 6 {B77R:A -> B78R:A: adjacent_5p upward } 0 7 {B78R:A -> B77R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 E75R:G 0 1 E76R:A 0 2 E77R:A 0 3 E78R:A 0 [Edges] 0 {E75R:G -> E76R:A: adjacent_5p } 0 1 {E76R:A -> E75R:G: adjacent_3p } 0 2 {E75R:G -> E78R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {E78R:A -> E75R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {E76R:A -> E77R:A: adjacent_5p upward } 0 5 {E77R:A -> E76R:A: adjacent_3p downward } 0 6 {E77R:A -> E78R:A: adjacent_5p upward } 0 7 {E78R:A -> E77R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A18R:U 0 1 A19R:U 0 2 A20R:C 0 3 A21R:G 0 [Edges] 0 {A18R:U -> A19R:U: adjacent_5p } 0 1 {A19R:U -> A18R:U: adjacent_3p } 0 2 {A18R:U -> A20R:C: upward } 0 3 {A20R:C -> A18R:U: downward } 0 4 {A18R:U -> A21R:G: pairing parallel trans one_hbond 87 Bs/Ww } 0 5 {A21R:G -> A18R:U: pairing parallel trans one_hbond 87 Ww/Bs } 0 6 {A19R:U -> A20R:C: adjacent_5p } 0 7 {A20R:C -> A19R:U: adjacent_3p } 0 8 {A20R:C -> A21R:G: adjacent_5p } 0 9 {A21R:G -> A20R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 A11R:U 0 1 A12R:U 0 2 A13R:C 0 3 A14R:G 0 [Edges] 0 {A11R:U -> A12R:U: adjacent_5p } 0 1 {A12R:U -> A11R:U: adjacent_3p } 0 2 {A11R:U -> A13R:C: upward } 0 3 {A13R:C -> A11R:U: downward } 0 4 {A11R:U -> A14R:G: pairing parallel trans one_hbond Ws/Ww } 0 5 {A14R:G -> A11R:U: pairing parallel trans one_hbond Ww/Ws } 0 6 {A12R:U -> A13R:C: adjacent_5p } 0 7 {A13R:C -> A12R:U: adjacent_3p } 0 8 {A13R:C -> A14R:G: adjacent_5p } 0 9 {A14R:G -> A13R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 A10R:U 0 1 A11R:A 0 2 A12R:C 0 3 A13R:G 0 [Edges] 0 {A10R:U -> A11R:A: adjacent_5p } 0 1 {A11R:A -> A10R:U: adjacent_3p } 0 2 {A10R:U -> A12R:C: upward } 0 3 {A12R:C -> A10R:U: downward } 0 4 {A10R:U -> A13R:G: pairing parallel trans one_hbond Bs/Ww } 0 5 {A13R:G -> A10R:U: pairing parallel trans one_hbond Ww/Bs } 0 6 {A11R:A -> A12R:C: adjacent_5p } 0 7 {A12R:C -> A11R:A: adjacent_3p } 0 8 {A12R:C -> A13R:G: adjacent_5p } 0 9 {A13R:G -> A12R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 C44R:G 0 1 C45R:A 0 2 C46R:A 0 3 C47R:C 0 [Edges] 0 {C44R:G -> C45R:A: adjacent_5p } 0 1 {C45R:A -> C44R:G: adjacent_3p } 0 2 {C44R:G -> C47R:C: pairing parallel trans 119 Ss/Ww } 0 3 {C47R:C -> C44R:G: pairing parallel trans 119 Ww/Ss } 0 4 {C45R:A -> C46R:A: adjacent_5p upward } 0 5 {C46R:A -> C45R:A: adjacent_3p downward } 0 6 {C46R:A -> C47R:C: adjacent_5p upward } 0 7 {C47R:C -> C46R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 D44R:G 0 1 D45R:A 0 2 D46R:A 0 3 D47R:C 0 [Edges] 0 {D44R:G -> D45R:A: adjacent_5p } 0 1 {D45R:A -> D44R:G: adjacent_3p } 0 2 {D44R:G -> D47R:C: pairing parallel trans 119 Ss/Ww } 0 3 {D47R:C -> D44R:G: pairing parallel trans 119 Ww/Ss } 0 4 {D45R:A -> D46R:A: adjacent_5p upward } 0 5 {D46R:A -> D45R:A: adjacent_3p downward } 0 6 {D46R:A -> D47R:C: adjacent_5p upward } 0 7 {D47R:C -> D46R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A87R:G 0 1 A88.AR:A 0 2 A88.BR:G 0 3 A89R:A 0 [Edges] 0 {A87R:G -> A88.AR:A: adjacent_5p } 0 1 {A88.AR:A -> A87R:G: adjacent_3p } 0 2 {A87R:G -> A89R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A89R:A -> A87R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A88.AR:A -> A88.BR:G: adjacent_5p upward } 0 5 {A88.BR:G -> A88.AR:A: adjacent_3p downward } 0 6 {A88.BR:G -> A89R:A: adjacent_5p upward } 0 7 {A89R:A -> A88.BR:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A2659R:G 0 1 A2660R:U 0 2 A2661R:A 0 3 A2662R:A 0 [Edges] 0 {A2659R:G -> A2660R:U: adjacent_5p } 0 1 {A2660R:U -> A2659R:G: adjacent_3p } 0 2 {A2659R:G -> A2662R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A2662R:A -> A2659R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A2660R:U -> A2661R:A: adjacent_5p upward } 0 5 {A2661R:A -> A2660R:U: adjacent_3p downward } 0 6 {A2661R:A -> A2662R:A: adjacent_5p upward } 0 7 {A2662R:A -> A2661R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A11R:G 0 1 A12R:A 0 2 A13R:G 0 3 A14R:G 0 [Edges] 0 {A11R:G -> A12R:A: adjacent_5p } 0 1 {A12R:A -> A11R:G: adjacent_3p } 0 2 {A11R:G -> A14R:G: pairing parallel cis one_hbond Ws/Hh } 0 3 {A14R:G -> A11R:G: pairing parallel cis one_hbond Hh/Ws } 0 4 {A12R:A -> A13R:G: adjacent_5p } 0 5 {A13R:G -> A12R:A: adjacent_3p } 0 6 {A13R:G -> A14R:G: adjacent_5p } 0 7 {A14R:G -> A13R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 B16R:G 0 1 B17R:A 0 2 B18R:G 0 3 B19R:G 0 [Edges] 0 {B16R:G -> B17R:A: adjacent_5p } 0 1 {B17R:A -> B16R:G: adjacent_3p } 0 2 {B16R:G -> B19R:G: pairing parallel cis VI Ww/Hh } 0 3 {B19R:G -> B16R:G: pairing parallel cis VI Hh/Ww } 0 4 {B17R:A -> B18R:G: adjacent_5p } 0 5 {B18R:G -> B17R:A: adjacent_3p } 0 6 {B18R:G -> B19R:G: adjacent_5p } 0 7 {B19R:G -> B18R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 B25R:G 0 1 B26R:A 0 2 B27R:G 0 3 B28R:G 0 [Edges] 0 {B25R:G -> B26R:A: adjacent_5p } 0 1 {B26R:A -> B25R:G: adjacent_3p } 0 2 {B25R:G -> B28R:G: pairing parallel cis one_hbond Ws/Hh } 0 3 {B28R:G -> B25R:G: pairing parallel cis one_hbond Hh/Ws } 0 4 {B26R:A -> B27R:G: adjacent_5p } 0 5 {B27R:G -> B26R:A: adjacent_3p } 0 6 {B27R:G -> B28R:G: adjacent_5p } 0 7 {B28R:G -> B27R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 B26R:G 0 1 B27R:C 0 2 B28R:A 0 3 B29R:A 0 [Edges] 0 {B26R:G -> B27R:C: adjacent_5p } 0 1 {B27R:C -> B26R:G: adjacent_3p } 0 2 {B26R:G -> B29R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {B29R:A -> B26R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {B27R:C -> B28R:A: adjacent_5p upward } 0 5 {B28R:A -> B27R:C: adjacent_3p downward } 0 6 {B28R:A -> B29R:A: adjacent_5p upward } 0 7 {B29R:A -> B28R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A10R:G 0 1 A11R:A 0 2 A12R:A 0 3 A13R:A 0 [Edges] 0 {A10R:G -> A11R:A: adjacent_5p } 0 1 {A11R:A -> A10R:G: adjacent_3p } 0 2 {A10R:G -> A13R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A13R:A -> A10R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A11R:A -> A12R:A: adjacent_5p upward } 0 5 {A12R:A -> A11R:A: adjacent_3p downward } 0 6 {A12R:A -> A13R:A: adjacent_5p upward } 0 7 {A13R:A -> A12R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A16R:G 0 1 A17R:A 0 2 A18R:G 0 3 A19R:A 0 [Edges] 0 {A16R:G -> A17R:A: adjacent_5p } 0 1 {A17R:A -> A16R:G: adjacent_3p } 0 2 {A16R:G -> A19R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A19R:A -> A16R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A17R:A -> A18R:G: adjacent_5p upward } 0 5 {A18R:G -> A17R:A: adjacent_3p downward } 0 6 {A18R:G -> A19R:A: adjacent_5p upward } 0 7 {A19R:A -> A18R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A7R:U 0 1 A8R:U 0 2 A9R:G 0 3 A10R:A 0 [Edges] 0 {A7R:U -> A8R:U: adjacent_5p } 0 1 {A8R:U -> A7R:U: adjacent_3p } 0 2 {A7R:U -> A10R:A: pairing parallel cis Ww/Hh } 0 3 {A10R:A -> A7R:U: pairing parallel cis Hh/Ww } 0 4 {A8R:U -> A9R:G: adjacent_5p } 0 5 {A9R:G -> A8R:U: adjacent_3p } 0 6 {A9R:G -> A10R:A: adjacent_5p upward } 0 7 {A10R:A -> A9R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A16R:G 0 1 A17R:A 0 2 A18R:A 0 3 A19R:A 0 [Edges] 0 {A16R:G -> A17R:A: adjacent_5p } 0 1 {A17R:A -> A16R:G: adjacent_3p } 0 2 {A16R:G -> A19R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A19R:A -> A16R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A17R:A -> A18R:A: adjacent_5p upward } 0 5 {A18R:A -> A17R:A: adjacent_3p downward } 0 6 {A18R:A -> A19R:A: adjacent_5p upward } 0 7 {A19R:A -> A18R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A23R:U 0 1 A24R:C 0 2 A25R:G 0 3 A26R:A 0 [Edges] 0 {A23R:U -> A24R:C: adjacent_5p } 0 1 {A24R:C -> A23R:U: adjacent_3p } 0 2 {A23R:U -> A26R:A: pairing parallel cis XXIII Ww/Hh } 0 3 {A26R:A -> A23R:U: pairing parallel cis XXIII Hh/Ww } 0 4 {A24R:C -> A25R:G: adjacent_5p } 0 5 {A25R:G -> A24R:C: adjacent_3p } 0 6 {A25R:G -> A26R:A: adjacent_5p upward } 0 7 {A26R:A -> A25R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A10R:G 0 1 A11R:C 0 2 A12R:A 0 3 A13R:U 0 [Edges] 0 {A10R:G -> A11R:C: adjacent_5p } 0 1 {A11R:C -> A10R:G: adjacent_3p } 0 2 {A10R:G -> A13R:U: pairing antiparallel cis one_hbond 85 Sw/Ws } 0 3 {A13R:U -> A10R:G: pairing antiparallel cis one_hbond 85 Ws/Sw } 0 4 {A11R:C -> A12R:A: adjacent_5p } 0 5 {A12R:A -> A11R:C: adjacent_3p } 0 6 {A12R:A -> A13R:U: adjacent_5p } 0 7 {A13R:U -> A12R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A14R:G 0 1 A15R:A 0 2 A16R:A 0 3 A17R:A 0 [Edges] 0 {A14R:G -> A15R:A: adjacent_5p } 0 1 {A15R:A -> A14R:G: adjacent_3p } 0 2 {A14R:G -> A17R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A17R:A -> A14R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A15R:A -> A16R:A: adjacent_5p upward } 0 5 {A16R:A -> A15R:A: adjacent_3p downward } 0 6 {A16R:A -> A17R:A: adjacent_5p upward } 0 7 {A17R:A -> A16R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 C14R:G 0 1 C15R:U 0 2 C16R:A 0 3 C17R:A 0 [Edges] 0 {C14R:G -> C15R:U: adjacent_5p } 0 1 {C15R:U -> C14R:G: adjacent_3p } 0 2 {C14R:G -> C17R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {C17R:A -> C14R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {C15R:U -> C16R:A: adjacent_5p } 0 5 {C16R:A -> C15R:U: adjacent_3p } 0 6 {C15R:U -> C17R:A: outward } 0 7 {C17R:A -> C15R:U: outward } 0 8 {C16R:A -> C17R:A: adjacent_5p } 0 9 {C17R:A -> C16R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 6 2 . 5 . 8 3 3 7 9 . MOLECULE: [GraphModel] [Vertices] 0 A9R:U 0 1 A10R:A 0 2 A11R:C 0 3 A12R:G 0 [Edges] 0 {A9R:U -> A10R:A: adjacent_5p } 0 1 {A10R:A -> A9R:U: adjacent_3p } 0 2 {A9R:U -> A12R:G: pairing parallel trans one_hbond 87 Ws/Ws } 0 3 {A12R:G -> A9R:U: pairing parallel trans one_hbond 87 Ws/Ws } 0 4 {A10R:A -> A11R:C: adjacent_5p } 0 5 {A11R:C -> A10R:A: adjacent_3p } 0 6 {A11R:C -> A12R:G: adjacent_5p } 0 7 {A12R:G -> A11R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A11R:G 0 1 A12R:A 0 2 A13R:A 0 3 A14R:A 0 [Edges] 0 {A11R:G -> A12R:A: adjacent_5p } 0 1 {A12R:A -> A11R:G: adjacent_3p } 0 2 {A11R:G -> A14R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A14R:A -> A11R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A12R:A -> A13R:A: adjacent_5p upward } 0 5 {A13R:A -> A12R:A: adjacent_3p downward } 0 6 {A13R:A -> A14R:A: adjacent_5p upward } 0 7 {A14R:A -> A13R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A10R:A 0 1 A11R:C 0 2 A12R:A 0 3 A13R:A 0 [Edges] 0 {A10R:A -> A11R:C: adjacent_5p } 0 1 {A11R:C -> A10R:A: adjacent_3p } 0 2 {A10R:A -> A13R:A: pairing antiparallel trans one_hbond 41 Ss/Hw } 0 3 {A13R:A -> A10R:A: pairing antiparallel trans one_hbond 41 Hw/Ss } 0 4 {A11R:C -> A12R:A: adjacent_5p } 0 5 {A12R:A -> A11R:C: adjacent_3p } 0 6 {A12R:A -> A13R:A: adjacent_5p upward } 0 7 {A13R:A -> A12R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 B112R:G 0 1 B113R:U 0 2 B114R:A 0 3 B115R:A 0 [Edges] 0 {B112R:G -> B113R:U: adjacent_5p } 0 1 {B113R:U -> B112R:G: adjacent_3p } 0 2 {B112R:G -> B115R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {B115R:A -> B112R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {B113R:U -> B114R:A: adjacent_5p upward } 0 5 {B114R:A -> B113R:U: adjacent_3p downward } 0 6 {B114R:A -> B115R:A: adjacent_5p upward } 0 7 {B115R:A -> B114R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A6R:U 0 1 A7R:C 0 2 A8R:A 0 3 A9R:G 0 [Edges] 0 {A6R:U -> A7R:C: adjacent_5p } 0 1 {A7R:C -> A6R:U: adjacent_3p } 0 2 {A6R:U -> A9R:G: pairing parallel trans 87 Bs/Ww } 0 3 {A9R:G -> A6R:U: pairing parallel trans 87 Ww/Bs } 0 4 {A7R:C -> A8R:A: adjacent_5p } 0 5 {A8R:A -> A7R:C: adjacent_3p } 0 6 {A8R:A -> A9R:G: adjacent_5p } 0 7 {A9R:G -> A8R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A15R:G 0 1 A16R:A 0 2 A17R:G 0 3 A18R:A 0 [Edges] 0 {A15R:G -> A16R:A: adjacent_5p } 0 1 {A16R:A -> A15R:G: adjacent_3p } 0 2 {A15R:G -> A18R:A: pairing antiparallel trans one_hbond 54 Ws/Hh } 0 3 {A18R:A -> A15R:G: pairing antiparallel trans one_hbond 54 Hh/Ws } 0 4 {A16R:A -> A17R:G: adjacent_5p } 0 5 {A17R:G -> A16R:A: adjacent_3p } 0 6 {A17R:G -> A18R:A: adjacent_5p upward } 0 7 {A18R:A -> A17R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A14R:G 0 1 A15R:A 0 2 A16R:G 0 3 A17R:A 0 [Edges] 0 {A14R:G -> A15R:A: adjacent_5p } 0 1 {A15R:A -> A14R:G: adjacent_3p } 0 2 {A14R:G -> A17R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A17R:A -> A14R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A15R:A -> A16R:G: adjacent_5p upward } 0 5 {A16R:G -> A15R:A: adjacent_3p downward } 0 6 {A16R:G -> A17R:A: adjacent_5p upward } 0 7 {A17R:A -> A16R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 C14R:G 0 1 C15R:A 0 2 C16R:G 0 3 C17R:A 0 [Edges] 0 {C14R:G -> C15R:A: adjacent_5p } 0 1 {C15R:A -> C14R:G: adjacent_3p } 0 2 {C14R:G -> C17R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {C17R:A -> C14R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {C15R:A -> C16R:G: adjacent_5p upward } 0 5 {C16R:G -> C15R:A: adjacent_3p downward } 0 6 {C16R:G -> C17R:A: adjacent_5p upward } 0 7 {C17R:A -> C16R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A14R:G 0 1 A15R:A 0 2 A16R:G 0 3 A17R:A 0 [Edges] 0 {A14R:G -> A15R:A: adjacent_5p } 0 1 {A15R:A -> A14R:G: adjacent_3p } 0 2 {A14R:G -> A17R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A17R:A -> A14R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A15R:A -> A16R:G: adjacent_5p upward } 0 5 {A16R:G -> A15R:A: adjacent_3p downward } 0 6 {A16R:G -> A17R:A: adjacent_5p upward } 0 7 {A17R:A -> A16R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 B14R:G 0 1 B15R:A 0 2 B16R:G 0 3 B17R:A 0 [Edges] 0 {B14R:G -> B15R:A: adjacent_5p } 0 1 {B15R:A -> B14R:G: adjacent_3p } 0 2 {B14R:G -> B17R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {B17R:A -> B14R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {B15R:A -> B16R:G: adjacent_5p upward } 0 5 {B16R:G -> B15R:A: adjacent_3p downward } 0 6 {B16R:G -> B17R:A: adjacent_5p upward } 0 7 {B17R:A -> B16R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 C14R:G 0 1 C15R:A 0 2 C16R:G 0 3 C17R:A 0 [Edges] 0 {C14R:G -> C15R:A: adjacent_5p } 0 1 {C15R:A -> C14R:G: adjacent_3p } 0 2 {C14R:G -> C17R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {C17R:A -> C14R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {C15R:A -> C16R:G: adjacent_5p upward } 0 5 {C16R:G -> C15R:A: adjacent_3p downward } 0 6 {C16R:G -> C17R:A: adjacent_5p upward } 0 7 {C17R:A -> C16R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A2659R:G 0 1 A2660R:A 0 2 A2661R:G 0 3 A2662R:A 0 [Edges] 0 {A2659R:G -> A2660R:A: adjacent_5p } 0 1 {A2660R:A -> A2659R:G: adjacent_3p } 0 2 {A2659R:G -> A2662R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A2662R:A -> A2659R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A2660R:A -> A2661R:G: adjacent_5p upward } 0 5 {A2661R:G -> A2660R:A: adjacent_3p downward } 0 6 {A2661R:G -> A2662R:A: adjacent_5p upward } 0 7 {A2662R:A -> A2661R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 T33R:U 0 1 T34R:G 0 2 T35R:A 0 3 T36R:U 0 [Edges] 0 {T33R:U -> T34R:G: adjacent_5p } 0 1 {T34R:G -> T33R:U: adjacent_3p } 0 2 {T33R:U -> T36R:U: pairing parallel trans one_hbond Ss/Ww } 0 3 {T36R:U -> T33R:U: pairing parallel trans one_hbond Ww/Ss } 0 4 {T34R:G -> T35R:A: adjacent_5p } 0 5 {T35R:A -> T34R:G: adjacent_3p } 0 6 {T35R:A -> T36R:U: adjacent_5p } 0 7 {T36R:U -> T35R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A15R:G 0 1 A16R:A 0 2 A17R:A 0 3 A18R:A 0 [Edges] 0 {A15R:G -> A16R:A: adjacent_5p } 0 1 {A16R:A -> A15R:G: adjacent_3p } 0 2 {A15R:G -> A18R:A: pairing antiparallel trans one_hbond Ss/Hw } 0 3 {A18R:A -> A15R:G: pairing antiparallel trans one_hbond Hw/Ss } 0 4 {A16R:A -> A17R:A: adjacent_5p upward } 0 5 {A17R:A -> A16R:A: adjacent_3p downward } 0 6 {A17R:A -> A18R:A: adjacent_5p upward } 0 7 {A18R:A -> A17R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A4R:C 0 1 A5R:A 0 2 A6R:A 0 3 A7R:G 0 [Edges] 0 {A4R:C -> A5R:A: adjacent_5p } 0 1 {A5R:A -> A4R:C: adjacent_3p } 0 2 {A4R:C -> A7R:G: pairing antiparallel cis one_hbond 122 Wh/Bh } 0 3 {A7R:G -> A4R:C: pairing antiparallel cis one_hbond 122 Bh/Wh } 0 4 {A5R:A -> A6R:A: adjacent_5p upward } 0 5 {A6R:A -> A5R:A: adjacent_3p downward } 0 6 {A6R:A -> A7R:G: adjacent_5p upward } 0 7 {A7R:G -> A6R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A19R:G 0 1 A20R:U 0 2 A21R:G 0 3 A22R:A 0 [Edges] 0 {A19R:G -> A20R:U: adjacent_5p } 0 1 {A20R:U -> A19R:G: adjacent_3p } 0 2 {A19R:G -> A22R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A22R:A -> A19R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A20R:U -> A21R:G: adjacent_5p upward } 0 5 {A21R:G -> A20R:U: adjacent_3p downward } 0 6 {A21R:G -> A22R:A: adjacent_5p upward } 0 7 {A22R:A -> A21R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A19R:G 0 1 A20R:U 0 2 A21R:G 0 3 A22R:A 0 [Edges] 0 {A19R:G -> A20R:U: adjacent_5p } 0 1 {A20R:U -> A19R:G: adjacent_3p } 0 2 {A19R:G -> A22R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A22R:A -> A19R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A20R:U -> A21R:G: adjacent_5p } 0 5 {A21R:G -> A20R:U: adjacent_3p } 0 6 {A21R:G -> A22R:A: adjacent_5p upward } 0 7 {A22R:A -> A21R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 22R:U 0 1 23R:U 0 2 24R:C 0 3 25R:G 0 [Edges] 0 {22R:U -> 23R:U: adjacent_5p inward } 0 1 {23R:U -> 22R:U: adjacent_3p inward } 0 2 {22R:U -> 25R:G: pairing parallel trans one_hbond Ws/Ww } 0 3 {25R:G -> 22R:U: pairing parallel trans one_hbond Ww/Ws } 0 4 {23R:U -> 24R:C: adjacent_5p } 0 5 {24R:C -> 23R:U: adjacent_3p } 0 6 {24R:C -> 25R:G: adjacent_5p } 0 7 {25R:G -> 24R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A14R:C 0 1 A15R:A 0 2 A16R:C 0 3 A17R:G 0 [Edges] 0 {A14R:C -> A15R:A: adjacent_5p } 0 1 {A15R:A -> A14R:C: adjacent_3p } 0 2 {A14R:C -> A16R:C: upward } 0 3 {A16R:C -> A14R:C: downward } 0 4 {A14R:C -> A17R:G: pairing parallel trans 129 Bs/Ww } 0 5 {A17R:G -> A14R:C: pairing parallel trans 129 Ww/Bs } 0 6 {A15R:A -> A16R:C: adjacent_5p } 0 7 {A16R:C -> A15R:A: adjacent_3p } 0 8 {A16R:C -> A17R:G: adjacent_5p } 0 9 {A17R:G -> A16R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 C10R:G 0 1 C11R:A 0 2 C12R:A 0 3 C13R:A 0 [Edges] 0 {C10R:G -> C11R:A: adjacent_5p } 0 1 {C11R:A -> C10R:G: adjacent_3p } 0 2 {C10R:G -> C13R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {C13R:A -> C10R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {C11R:A -> C12R:A: adjacent_5p upward } 0 5 {C12R:A -> C11R:A: adjacent_3p downward } 0 6 {C12R:A -> C13R:A: adjacent_5p upward } 0 7 {C13R:A -> C12R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 D10R:G 0 1 D11R:A 0 2 D12R:A 0 3 D13R:A 0 [Edges] 0 {D10R:G -> D11R:A: adjacent_5p } 0 1 {D11R:A -> D10R:G: adjacent_3p } 0 2 {D10R:G -> D13R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 3 {D13R:A -> D10R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 4 {D11R:A -> D12R:A: adjacent_5p upward } 0 5 {D12R:A -> D11R:A: adjacent_3p downward } 0 6 {D12R:A -> D13R:A: adjacent_5p upward } 0 7 {D13R:A -> D12R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 5R:C 0 1 6R:U 0 2 7R:U 0 3 8R:G 0 [Edges] 0 {5R:C -> 6R:U: adjacent_5p } 0 1 {6R:U -> 5R:C: adjacent_3p } 0 2 {5R:C -> 8R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {8R:G -> 5R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {6R:U -> 7R:U: adjacent_5p } 0 5 {7R:U -> 6R:U: adjacent_3p } 0 6 {7R:U -> 8R:G: adjacent_5p upward } 0 7 {8R:G -> 7R:U: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 6R:U 0 1 7R:U 0 2 8R:G 0 3 9R:C 0 [Edges] 0 {6R:U -> 7R:U: adjacent_5p } 0 1 {7R:U -> 6R:U: adjacent_3p } 0 2 {6R:U -> 9R:C: pairing antiparallel cis one_hbond 106 Ww/Bs } 0 3 {9R:C -> 6R:U: pairing antiparallel cis one_hbond 106 Bs/Ww } 0 4 {7R:U -> 8R:G: adjacent_5p upward } 0 5 {8R:G -> 7R:U: adjacent_3p downward } 0 6 {8R:G -> 9R:C: adjacent_5p } 0 7 {9R:C -> 8R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A14R:G 0 1 A15R:U 0 2 A16R:A 0 3 A17R:A 0 [Edges] 0 {A14R:G -> A15R:U: adjacent_5p } 0 1 {A15R:U -> A14R:G: adjacent_3p } 0 2 {A14R:G -> A17R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A17R:A -> A14R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A15R:U -> A16R:A: adjacent_5p } 0 5 {A16R:A -> A15R:U: adjacent_3p } 0 6 {A16R:A -> A17R:A: adjacent_5p upward } 0 7 {A17R:A -> A16R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 11R:U 0 1 12R:U 0 2 13R:C 0 3 14R:G 0 [Edges] 0 {11R:U -> 12R:U: adjacent_5p } 0 1 {12R:U -> 11R:U: adjacent_3p } 0 2 {11R:U -> 14R:G: pairing parallel trans one_hbond Bs/Ww } 0 3 {14R:G -> 11R:U: pairing parallel trans one_hbond Ww/Bs } 0 4 {12R:U -> 13R:C: adjacent_5p upward } 0 5 {13R:C -> 12R:U: adjacent_3p downward } 0 6 {13R:C -> 14R:G: adjacent_5p } 0 7 {14R:G -> 13R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A19R:U 0 1 A20R:A 0 2 A21R:C 0 3 A22R:G 0 [Edges] 0 {A19R:U -> A20R:A: adjacent_5p } 0 1 {A20R:A -> A19R:U: adjacent_3p } 0 2 {A19R:U -> A21R:C: upward } 0 3 {A21R:C -> A19R:U: downward } 0 4 {A19R:U -> A22R:G: pairing parallel trans 87 Bs/Ww } 0 5 {A22R:G -> A19R:U: pairing parallel trans 87 Ww/Bs } 0 6 {A20R:A -> A21R:C: adjacent_5p } 0 7 {A21R:C -> A20R:A: adjacent_3p } 0 8 {A21R:C -> A22R:G: adjacent_5p } 0 9 {A22R:G -> A21R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 A18R:G 0 1 A19R:A 0 2 A20R:G 0 3 A21R:A 0 [Edges] 0 {A18R:G -> A19R:A: adjacent_5p } 0 1 {A19R:A -> A18R:G: adjacent_3p } 0 2 {A18R:G -> A21R:A: pairing antiparallel trans one_hbond Ww/Hh } 0 3 {A21R:A -> A18R:G: pairing antiparallel trans one_hbond Hh/Ww } 0 4 {A19R:A -> A20R:G: adjacent_5p upward } 0 5 {A20R:G -> A19R:A: adjacent_3p downward } 0 6 {A20R:G -> A21R:A: adjacent_5p upward } 0 7 {A21R:A -> A20R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 B289R:G 0 1 B290R:A 0 2 B291R:G 0 3 B292R:A 0 [Edges] 0 {B289R:G -> B290R:A: adjacent_5p } 0 1 {B290R:A -> B289R:G: adjacent_3p } 0 2 {B289R:G -> B292R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {B292R:A -> B289R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {B290R:A -> B291R:G: adjacent_5p upward } 0 5 {B291R:G -> B290R:A: adjacent_3p downward } 0 6 {B291R:G -> B292R:A: adjacent_5p upward } 0 7 {B292R:A -> B291R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A217R:G 0 1 A218R:G 0 2 A219R:C 0 3 A220R:A 0 [Edges] 0 {A217R:G -> A218R:G: adjacent_5p } 0 1 {A218R:G -> A217R:G: adjacent_3p } 0 2 {A217R:G -> A219R:C: upward } 0 3 {A219R:C -> A217R:G: downward } 0 4 {A217R:G -> A220R:A: pairing antiparallel trans one_hbond 63 Ss/Wh } 0 5 {A220R:A -> A217R:G: pairing antiparallel trans one_hbond 63 Wh/Ss } 0 6 {A218R:G -> A219R:C: adjacent_5p downward } 0 7 {A219R:C -> A218R:G: adjacent_3p upward } 0 8 {A219R:C -> A220R:A: adjacent_5p } 0 9 {A220R:A -> A219R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . [GraphModel] [Vertices] 0 A225R:A 0 1 A226R:A 0 2 A227R:A 0 3 A228R:C 0 [Edges] 0 {A225R:A -> A226R:A: adjacent_5p } 0 1 {A226R:A -> A225R:A: adjacent_3p } 0 2 {A225R:A -> A228R:C: pairing parallel cis one_hbond Ss/Hw } 0 3 {A228R:C -> A225R:A: pairing parallel cis one_hbond Hw/Ss } 0 4 {A226R:A -> A227R:A: adjacent_5p } 0 5 {A227R:A -> A226R:A: adjacent_3p } 0 6 {A227R:A -> A228R:C: adjacent_5p upward } 0 7 {A228R:C -> A227R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A15R:U 0 1 A16R:U 0 2 A17R:C 0 3 A18R:G 0 [Edges] 0 {A15R:U -> A16R:U: adjacent_5p } 0 1 {A16R:U -> A15R:U: adjacent_3p } 0 2 {A15R:U -> A18R:G: pairing parallel trans one_hbond Ws/Ww } 0 3 {A18R:G -> A15R:U: pairing parallel trans one_hbond Ww/Ws } 0 4 {A16R:U -> A17R:C: adjacent_5p } 0 5 {A17R:C -> A16R:U: adjacent_3p } 0 6 {A17R:C -> A18R:G: adjacent_5p } 0 7 {A18R:G -> A17R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A23R:U 0 1 A24R:G 0 2 A25R:G 0 3 A26R:A 0 [Edges] 0 {A23R:U -> A24R:G: adjacent_5p } 0 1 {A24R:G -> A23R:U: adjacent_3p } 0 2 {A23R:U -> A26R:A: pairing parallel cis XXIII Ww/Hh } 0 3 {A26R:A -> A23R:U: pairing parallel cis XXIII Hh/Ww } 0 4 {A24R:G -> A25R:G: adjacent_5p } 0 5 {A25R:G -> A24R:G: adjacent_3p } 0 6 {A25R:G -> A26R:A: adjacent_5p upward } 0 7 {A26R:A -> A25R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 '0'196R:G 0 1 '0'197R:C 0 2 '0'198R:A 0 3 '0'199R:A 0 [Edges] 0 {'0'196R:G -> '0'197R:C: adjacent_5p } 0 1 {'0'197R:C -> '0'196R:G: adjacent_3p } 0 2 {'0'196R:G -> '0'199R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {'0'199R:A -> '0'196R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {'0'197R:C -> '0'198R:A: adjacent_5p } 0 5 {'0'198R:A -> '0'197R:C: adjacent_3p } 0 6 {'0'198R:A -> '0'199R:A: adjacent_5p } 0 7 {'0'199R:A -> '0'198R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'253R:U 0 1 '0'254R:C 0 2 '0'255R:A 0 3 '0'256R:C 0 [Edges] 0 {'0'253R:U -> '0'254R:C: adjacent_5p } 0 1 {'0'254R:C -> '0'253R:U: adjacent_3p } 0 2 {'0'253R:U -> '0'256R:C: pairing antiparallel trans one_hbond 97 Ss/Hw } 0 3 {'0'256R:C -> '0'253R:U: pairing antiparallel trans one_hbond 97 Hw/Ss } 0 4 {'0'254R:C -> '0'255R:A: adjacent_5p upward } 0 5 {'0'255R:A -> '0'254R:C: adjacent_3p downward } 0 6 {'0'255R:A -> '0'256R:C: adjacent_5p upward } 0 7 {'0'256R:C -> '0'255R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'469R:G 0 1 '0'470R:U 0 2 '0'471R:G 0 3 '0'472R:A 0 [Edges] 0 {'0'469R:G -> '0'470R:U: adjacent_5p } 0 1 {'0'470R:U -> '0'469R:G: adjacent_3p } 0 2 {'0'469R:G -> '0'472R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'472R:A -> '0'469R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'470R:U -> '0'471R:G: adjacent_5p upward } 0 5 {'0'471R:G -> '0'470R:U: adjacent_3p downward } 0 6 {'0'471R:G -> '0'472R:A: adjacent_5p upward } 0 7 {'0'472R:A -> '0'471R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'604R:G 0 1 '0'605R:C 0 2 '0'606R:C 0 3 '0'607R:G 0 [Edges] 0 {'0'604R:G -> '0'605R:C: adjacent_5p } 0 1 {'0'605R:C -> '0'604R:G: adjacent_3p } 0 2 {'0'604R:G -> '0'607R:G: pairing parallel cis VI Ww/Hh } 0 3 {'0'607R:G -> '0'604R:G: pairing parallel cis VI Hh/Ww } 0 4 {'0'605R:C -> '0'606R:C: adjacent_5p } 0 5 {'0'606R:C -> '0'605R:C: adjacent_3p } 0 6 {'0'606R:C -> '0'607R:G: adjacent_5p upward } 0 7 {'0'607R:G -> '0'606R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'691R:G 0 1 '0'692R:A 0 2 '0'693R:A 0 3 '0'694R:A 0 [Edges] 0 {'0'691R:G -> '0'692R:A: adjacent_5p } 0 1 {'0'692R:A -> '0'691R:G: adjacent_3p } 0 2 {'0'691R:G -> '0'694R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'694R:A -> '0'691R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'692R:A -> '0'693R:A: adjacent_5p upward } 0 5 {'0'693R:A -> '0'692R:A: adjacent_3p downward } 0 6 {'0'693R:A -> '0'694R:A: adjacent_5p upward } 0 7 {'0'694R:A -> '0'693R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'776R:A 0 1 '0'777R:U 0 2 '0'778R:C 0 3 '0'779R:U 0 [Edges] 0 {'0'776R:A -> '0'777R:U: adjacent_5p } 0 1 {'0'777R:U -> '0'776R:A: adjacent_3p } 0 2 {'0'776R:A -> '0'779R:U: pairing parallel trans 42 Ss/Ws } 0 3 {'0'779R:U -> '0'776R:A: pairing parallel trans 42 Ws/Ss } 0 4 {'0'777R:U -> '0'778R:C: adjacent_5p } 0 5 {'0'778R:C -> '0'777R:U: adjacent_3p } 0 6 {'0'778R:C -> '0'779R:U: adjacent_5p upward } 0 7 {'0'779R:U -> '0'778R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'805R:G 0 1 '0'806R:A 0 2 '0'807R:A 0 3 '0'808R:A 0 [Edges] 0 {'0'805R:G -> '0'806R:A: adjacent_5p } 0 1 {'0'806R:A -> '0'805R:G: adjacent_3p } 0 2 {'0'805R:G -> '0'808R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'808R:A -> '0'805R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'806R:A -> '0'807R:A: adjacent_5p upward } 0 5 {'0'807R:A -> '0'806R:A: adjacent_3p downward } 0 6 {'0'807R:A -> '0'808R:A: adjacent_5p upward } 0 7 {'0'808R:A -> '0'807R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'867R:A 0 1 '0'868R:G 0 2 '0'869R:G 0 3 '0'870R:G 0 [Edges] 0 {'0'867R:A -> '0'868R:G: adjacent_5p } 0 1 {'0'868R:G -> '0'867R:A: adjacent_3p } 0 2 {'0'867R:A -> '0'870R:G: pairing antiparallel cis one_hbond Ss/Sw } 0 3 {'0'870R:G -> '0'867R:A: pairing antiparallel cis one_hbond Sw/Ss } 0 4 {'0'868R:G -> '0'869R:G: adjacent_5p } 0 5 {'0'869R:G -> '0'868R:G: adjacent_3p } 0 6 {'0'868R:G -> '0'870R:G: outward } 0 7 {'0'870R:G -> '0'868R:G: outward } 0 8 {'0'869R:G -> '0'870R:G: adjacent_5p } 0 9 {'0'870R:G -> '0'869R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 6 2 . 5 . 8 3 3 7 9 . [GraphModel] [Vertices] 0 '0'873R:G 0 1 '0'874R:A 0 2 '0'875R:A 0 3 '0'876R:A 0 [Edges] 0 {'0'873R:G -> '0'874R:A: adjacent_5p } 0 1 {'0'874R:A -> '0'873R:G: adjacent_3p } 0 2 {'0'873R:G -> '0'875R:A: upward } 0 3 {'0'875R:A -> '0'873R:G: downward } 0 4 {'0'873R:G -> '0'876R:A: pairing parallel trans X Ss/Ww } 0 5 {'0'876R:A -> '0'873R:G: pairing parallel trans X Ww/Ss } 0 6 {'0'874R:A -> '0'875R:A: adjacent_5p } 0 7 {'0'875R:A -> '0'874R:A: adjacent_3p } 0 8 {'0'875R:A -> '0'876R:A: adjacent_5p } 0 9 {'0'876R:A -> '0'875R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . [GraphModel] [Vertices] 0 '0'958R:G 0 1 '0'959R:C 0 2 '0'960R:G 0 3 '0'961R:A 0 [Edges] 0 {'0'958R:G -> '0'959R:C: adjacent_5p upward } 0 1 {'0'959R:C -> '0'958R:G: adjacent_3p downward } 0 2 {'0'958R:G -> '0'961R:A: pairing parallel trans X Ss/Ww } 0 3 {'0'961R:A -> '0'958R:G: pairing parallel trans X Ww/Ss } 0 4 {'0'959R:C -> '0'960R:G: adjacent_5p } 0 5 {'0'960R:G -> '0'959R:C: adjacent_3p } 0 6 {'0'960R:G -> '0'961R:A: adjacent_5p } 0 7 {'0'961R:A -> '0'960R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'1055R:G 0 1 '0'1056R:U 0 2 '0'1057R:A 0 3 '0'1058R:A 0 [Edges] 0 {'0'1055R:G -> '0'1056R:U: adjacent_5p } 0 1 {'0'1056R:U -> '0'1055R:G: adjacent_3p } 0 2 {'0'1055R:G -> '0'1058R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'1058R:A -> '0'1055R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'1056R:U -> '0'1057R:A: adjacent_5p upward } 0 5 {'0'1057R:A -> '0'1056R:U: adjacent_3p downward } 0 6 {'0'1057R:A -> '0'1058R:A: adjacent_5p upward } 0 7 {'0'1058R:A -> '0'1057R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'1238R:C 0 1 '0'1239R:G 0 2 '0'1240R:G 0 3 '0'1241R:G 0 [Edges] 0 {'0'1238R:C -> '0'1239R:G: adjacent_5p } 0 1 {'0'1239R:G -> '0'1238R:C: adjacent_3p } 0 2 {'0'1238R:C -> '0'1241R:G: pairing antiparallel trans one_hbond 117 Wh/Hh } 0 3 {'0'1241R:G -> '0'1238R:C: pairing antiparallel trans one_hbond 117 Hh/Wh } 0 4 {'0'1239R:G -> '0'1240R:G: adjacent_5p upward } 0 5 {'0'1240R:G -> '0'1239R:G: adjacent_3p downward } 0 6 {'0'1240R:G -> '0'1241R:G: adjacent_5p upward } 0 7 {'0'1241R:G -> '0'1240R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'1327R:G 0 1 '0'1328R:A 0 2 '0'1329R:A 0 3 '0'1330R:A 0 [Edges] 0 {'0'1327R:G -> '0'1328R:A: adjacent_5p } 0 1 {'0'1328R:A -> '0'1327R:G: adjacent_3p } 0 2 {'0'1327R:G -> '0'1330R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'1330R:A -> '0'1327R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'1328R:A -> '0'1329R:A: adjacent_5p } 0 5 {'0'1329R:A -> '0'1328R:A: adjacent_3p } 0 6 {'0'1329R:A -> '0'1330R:A: adjacent_5p upward } 0 7 {'0'1330R:A -> '0'1329R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'1469R:C 0 1 '0'1470R:A 0 2 '0'1471R:A 0 3 '0'1472R:C 0 [Edges] 0 {'0'1469R:C -> '0'1470R:A: adjacent_5p } 0 1 {'0'1470R:A -> '0'1469R:C: adjacent_3p } 0 2 {'0'1469R:C -> '0'1472R:C: pairing antiparallel trans one_hbond Ws/Hh } 0 3 {'0'1472R:C -> '0'1469R:C: pairing antiparallel trans one_hbond Hh/Ws } 0 4 {'0'1470R:A -> '0'1471R:A: adjacent_5p upward } 0 5 {'0'1471R:A -> '0'1470R:A: adjacent_3p downward } 0 6 {'0'1471R:A -> '0'1472R:C: adjacent_5p upward } 0 7 {'0'1472R:C -> '0'1471R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'1629R:G 0 1 '0'1630R:A 0 2 '0'1631R:A 0 3 '0'1632R:A 0 [Edges] 0 {'0'1629R:G -> '0'1630R:A: adjacent_5p } 0 1 {'0'1630R:A -> '0'1629R:G: adjacent_3p } 0 2 {'0'1629R:G -> '0'1632R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'1632R:A -> '0'1629R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'1630R:A -> '0'1631R:A: adjacent_5p upward } 0 5 {'0'1631R:A -> '0'1630R:A: adjacent_3p downward } 0 6 {'0'1631R:A -> '0'1632R:A: adjacent_5p upward } 0 7 {'0'1632R:A -> '0'1631R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'1752R:G 0 1 '0'1753R:C 0 2 '0'1754R:A 0 3 '0'1755R:A 0 [Edges] 0 {'0'1752R:G -> '0'1753R:C: adjacent_5p } 0 1 {'0'1753R:C -> '0'1752R:G: adjacent_3p } 0 2 {'0'1752R:G -> '0'1755R:A: pairing parallel trans one_hbond Sw/Ww } 0 3 {'0'1755R:A -> '0'1752R:G: pairing parallel trans one_hbond Ww/Sw } 0 4 {'0'1753R:C -> '0'1754R:A: adjacent_5p upward } 0 5 {'0'1754R:A -> '0'1753R:C: adjacent_3p downward } 0 6 {'0'1754R:A -> '0'1755R:A: adjacent_5p upward } 0 7 {'0'1755R:A -> '0'1754R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'1770R:U 0 1 '0'1771R:U 0 2 '0'1772R:C 0 3 '0'1773R:G 0 [Edges] 0 {'0'1770R:U -> '0'1771R:U: adjacent_5p } 0 1 {'0'1771R:U -> '0'1770R:U: adjacent_3p } 0 2 {'0'1770R:U -> '0'1773R:G: pairing parallel trans one_hbond Ws/Ww } 0 3 {'0'1773R:G -> '0'1770R:U: pairing parallel trans one_hbond Ww/Ws } 0 4 {'0'1771R:U -> '0'1772R:C: adjacent_5p } 0 5 {'0'1772R:C -> '0'1771R:U: adjacent_3p } 0 6 {'0'1772R:C -> '0'1773R:G: adjacent_5p } 0 7 {'0'1773R:G -> '0'1772R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'1794R:G 0 1 '0'1795R:G 0 2 '0'1796R:A 0 3 '0'1797R:A 0 [Edges] 0 {'0'1794R:G -> '0'1795R:G: adjacent_5p } 0 1 {'0'1795R:G -> '0'1794R:G: adjacent_3p } 0 2 {'0'1794R:G -> '0'1797R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'1797R:A -> '0'1794R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'1795R:G -> '0'1796R:A: adjacent_5p upward } 0 5 {'0'1796R:A -> '0'1795R:G: adjacent_3p downward } 0 6 {'0'1796R:A -> '0'1797R:A: adjacent_5p upward } 0 7 {'0'1797R:A -> '0'1796R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'1863R:G 0 1 '0'1864R:C 0 2 '0'1865R:A 0 3 '0'1866R:A 0 [Edges] 0 {'0'1863R:G -> '0'1864R:C: adjacent_5p } 0 1 {'0'1864R:C -> '0'1863R:G: adjacent_3p } 0 2 {'0'1863R:G -> '0'1866R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'1866R:A -> '0'1863R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'1864R:C -> '0'1865R:A: adjacent_5p upward } 0 5 {'0'1865R:A -> '0'1864R:C: adjacent_3p downward } 0 6 {'0'1865R:A -> '0'1866R:A: adjacent_5p upward } 0 7 {'0'1866R:A -> '0'1865R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'1940R:C 0 1 '0'1941R:A 0 2 '0'1942R:A 0 3 '0'1943R:C 0 [Edges] 0 {'0'1940R:C -> '0'1941R:A: adjacent_5p } 0 1 {'0'1941R:A -> '0'1940R:C: adjacent_3p } 0 2 {'0'1940R:C -> '0'1943R:C: pairing parallel cis one_hbond 134 Ws/Hw } 0 3 {'0'1943R:C -> '0'1940R:C: pairing parallel cis one_hbond 134 Hw/Ws } 0 4 {'0'1941R:A -> '0'1942R:A: adjacent_5p } 0 5 {'0'1942R:A -> '0'1941R:A: adjacent_3p } 0 6 {'0'1942R:A -> '0'1943R:C: adjacent_5p upward } 0 7 {'0'1943R:C -> '0'1942R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'2010R:A 0 1 '0'2011R:A 0 2 '0'2012R:U 0 3 '0'2013R:G 0 [Edges] 0 {'0'2010R:A -> '0'2011R:A: adjacent_5p } 0 1 {'0'2011R:A -> '0'2010R:A: adjacent_3p } 0 2 {'0'2010R:A -> '0'2013R:G: pairing antiparallel cis one_hbond Ss/Sw } 0 3 {'0'2013R:G -> '0'2010R:A: pairing antiparallel cis one_hbond Sw/Ss } 0 4 {'0'2011R:A -> '0'2012R:U: adjacent_5p } 0 5 {'0'2012R:U -> '0'2011R:A: adjacent_3p } 0 6 {'0'2011R:A -> '0'2013R:G: outward } 0 7 {'0'2013R:G -> '0'2011R:A: outward } 0 8 {'0'2012R:U -> '0'2013R:G: adjacent_5p } 0 9 {'0'2013R:G -> '0'2012R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 6 2 . 5 . 8 3 3 7 9 . [GraphModel] [Vertices] 0 '0'2249R:G 0 1 '0'2250R:G 0 2 '0'2251R:G 0 3 '0'2252R:A 0 [Edges] 0 {'0'2249R:G -> '0'2250R:G: adjacent_5p } 0 1 {'0'2250R:G -> '0'2249R:G: adjacent_3p } 0 2 {'0'2249R:G -> '0'2252R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'2252R:A -> '0'2249R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'2250R:G -> '0'2251R:G: adjacent_5p upward } 0 5 {'0'2251R:G -> '0'2250R:G: adjacent_3p downward } 0 6 {'0'2251R:G -> '0'2252R:A: adjacent_5p upward } 0 7 {'0'2252R:A -> '0'2251R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'2412R:G 0 1 '0'2413R:A 0 2 '0'2414R:A 0 3 '0'2415R:A 0 [Edges] 0 {'0'2412R:G -> '0'2413R:A: adjacent_5p } 0 1 {'0'2413R:A -> '0'2412R:G: adjacent_3p } 0 2 {'0'2412R:G -> '0'2415R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'2415R:A -> '0'2412R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'2413R:A -> '0'2414R:A: adjacent_5p upward } 0 5 {'0'2414R:A -> '0'2413R:A: adjacent_3p downward } 0 6 {'0'2414R:A -> '0'2415R:A: adjacent_5p upward } 0 7 {'0'2415R:A -> '0'2414R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'2630R:G 0 1 '0'2631R:U 0 2 '0'2632R:G 0 3 '0'2633R:A 0 [Edges] 0 {'0'2630R:G -> '0'2631R:U: adjacent_5p } 0 1 {'0'2631R:U -> '0'2630R:G: adjacent_3p } 0 2 {'0'2630R:G -> '0'2633R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'2633R:A -> '0'2630R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'2631R:U -> '0'2632R:G: adjacent_5p upward } 0 5 {'0'2632R:G -> '0'2631R:U: adjacent_3p downward } 0 6 {'0'2632R:G -> '0'2633R:A: adjacent_5p upward } 0 7 {'0'2633R:A -> '0'2632R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'2696R:G 0 1 '0'2697R:A 0 2 '0'2698R:G 0 3 '0'2699R:A 0 [Edges] 0 {'0'2696R:G -> '0'2697R:A: adjacent_5p } 0 1 {'0'2697R:A -> '0'2696R:G: adjacent_3p } 0 2 {'0'2696R:G -> '0'2699R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'2699R:A -> '0'2696R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'2697R:A -> '0'2698R:G: adjacent_5p upward } 0 5 {'0'2698R:G -> '0'2697R:A: adjacent_3p downward } 0 6 {'0'2698R:G -> '0'2699R:A: adjacent_5p upward } 0 7 {'0'2699R:A -> '0'2698R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '0'2877R:G 0 1 '0'2878R:U 0 2 '0'2879R:A 0 3 '0'2880R:A 0 [Edges] 0 {'0'2877R:G -> '0'2878R:U: adjacent_5p } 0 1 {'0'2878R:U -> '0'2877R:G: adjacent_3p } 0 2 {'0'2877R:G -> '0'2880R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'0'2880R:A -> '0'2877R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'0'2878R:U -> '0'2879R:A: adjacent_5p upward } 0 5 {'0'2879R:A -> '0'2878R:U: adjacent_3p downward } 0 6 {'0'2879R:A -> '0'2880R:A: adjacent_5p upward } 0 7 {'0'2880R:A -> '0'2879R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '9'3043R:G 0 1 '9'3044R:A 0 2 '9'3045R:A 0 3 '9'3046R:C 0 [Edges] 0 {'9'3043R:G -> '9'3044R:A: adjacent_5p } 0 1 {'9'3044R:A -> '9'3043R:G: adjacent_3p } 0 2 {'9'3043R:G -> '9'3046R:C: pairing parallel trans 119 Ss/Ww } 0 3 {'9'3046R:C -> '9'3043R:G: pairing parallel trans 119 Ww/Ss } 0 4 {'9'3044R:A -> '9'3045R:A: adjacent_5p upward } 0 5 {'9'3045R:A -> '9'3044R:A: adjacent_3p downward } 0 6 {'9'3045R:A -> '9'3046R:C: adjacent_5p upward } 0 7 {'9'3046R:C -> '9'3045R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 '9'3090R:G 0 1 '9'3091R:C 0 2 '9'3092R:G 0 3 '9'3093R:A 0 [Edges] 0 {'9'3090R:G -> '9'3091R:C: adjacent_5p } 0 1 {'9'3091R:C -> '9'3090R:G: adjacent_3p } 0 2 {'9'3090R:G -> '9'3093R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {'9'3093R:A -> '9'3090R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {'9'3091R:C -> '9'3092R:G: adjacent_5p upward } 0 5 {'9'3092R:G -> '9'3091R:C: adjacent_3p downward } 0 6 {'9'3092R:G -> '9'3093R:A: adjacent_5p upward } 0 7 {'9'3093R:A -> '9'3092R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 E22R:G 0 1 E23R:G 0 2 E24R:U 0 3 E25R:C 0 [Edges] 0 {E22R:G -> E23R:G: adjacent_5p } 0 1 {E23R:G -> E22R:G: adjacent_3p } 0 2 {E22R:G -> E25R:C: pairing antiparallel cis XIX Ww/Ww } 0 3 {E25R:C -> E22R:G: pairing antiparallel cis XIX Ww/Ww } 0 4 {E23R:G -> E24R:U: adjacent_5p } 0 5 {E24R:U -> E23R:G: adjacent_3p } 0 6 {E24R:U -> E25R:C: adjacent_5p } 0 7 {E25R:C -> E24R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 F22R:G 0 1 F23R:G 0 2 F24R:U 0 3 F25R:C 0 [Edges] 0 {F22R:G -> F23R:G: adjacent_5p } 0 1 {F23R:G -> F22R:G: adjacent_3p } 0 2 {F22R:G -> F25R:C: pairing antiparallel cis 127 Ww/Ww } 0 3 {F25R:C -> F22R:G: pairing antiparallel cis 127 Ww/Ww } 0 4 {F23R:G -> F24R:U: adjacent_5p } 0 5 {F24R:U -> F23R:G: adjacent_3p } 0 6 {F24R:U -> F25R:C: adjacent_5p outward } 0 7 {F25R:C -> F24R:U: adjacent_3p outward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A28R:G 0 1 A29R:A 0 2 A30R:U 0 3 A31R:C 0 [Edges] 0 {A28R:G -> A29R:A: adjacent_5p } 0 1 {A29R:A -> A28R:G: adjacent_3p } 0 2 {A28R:G -> A31R:C: pairing antiparallel cis one_hbond Sw/Ss } 0 3 {A31R:C -> A28R:G: pairing antiparallel cis one_hbond Ss/Sw } 0 4 {A29R:A -> A30R:U: adjacent_5p } 0 5 {A30R:U -> A29R:A: adjacent_3p } 0 6 {A30R:U -> A31R:C: adjacent_5p } 0 7 {A31R:C -> A30R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A159R:G 0 1 A160R:A 0 2 A161R:A 0 3 A162R:A 0 [Edges] 0 {A159R:G -> A160R:A: adjacent_5p } 0 1 {A160R:A -> A159R:G: adjacent_3p } 0 2 {A159R:G -> A162R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A162R:A -> A159R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A160R:A -> A161R:A: adjacent_5p upward } 0 5 {A161R:A -> A160R:A: adjacent_3p downward } 0 6 {A161R:A -> A162R:A: adjacent_5p upward } 0 7 {A162R:A -> A161R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A251R:G 0 1 A252R:U 0 2 A253R:U 0 3 A254R:G 0 [Edges] 0 {A251R:G -> A252R:U: adjacent_5p } 0 1 {A252R:U -> A251R:G: adjacent_3p } 0 2 {A251R:G -> A254R:G: pairing parallel cis VI Ww/Hh } 0 3 {A254R:G -> A251R:G: pairing parallel cis VI Hh/Ww } 0 4 {A252R:U -> A253R:U: adjacent_5p } 0 5 {A253R:U -> A252R:U: adjacent_3p } 0 6 {A253R:U -> A254R:G: adjacent_5p } 0 7 {A254R:G -> A253R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A297R:G 0 1 A298R:A 0 2 A299R:G 0 3 A300R:A 0 [Edges] 0 {A297R:G -> A298R:A: adjacent_5p } 0 1 {A298R:A -> A297R:G: adjacent_3p } 0 2 {A297R:G -> A300R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A300R:A -> A297R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A298R:A -> A299R:G: adjacent_5p upward } 0 5 {A299R:G -> A298R:A: adjacent_3p downward } 0 6 {A299R:G -> A300R:A: adjacent_5p upward } 0 7 {A300R:A -> A299R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A343R:U 0 1 A344R:A 0 2 A345R:C 0 3 A346R:G 0 [Edges] 0 {A343R:U -> A344R:A: adjacent_5p } 0 1 {A344R:A -> A343R:U: adjacent_3p } 0 2 {A343R:U -> A346R:G: pairing parallel trans 87 Bs/Ww } 0 3 {A346R:G -> A343R:U: pairing parallel trans 87 Ww/Bs } 0 4 {A344R:A -> A345R:C: adjacent_5p } 0 5 {A345R:C -> A344R:A: adjacent_3p } 0 6 {A345R:C -> A346R:G: adjacent_5p } 0 7 {A346R:G -> A345R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A380R:G 0 1 A381R:C 0 2 A382R:A 0 3 A383R:A 0 [Edges] 0 {A380R:G -> A381R:C: adjacent_5p } 0 1 {A381R:C -> A380R:G: adjacent_3p } 0 2 {A380R:G -> A383R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A383R:A -> A380R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A381R:C -> A382R:A: adjacent_5p upward } 0 5 {A382R:A -> A381R:C: adjacent_3p downward } 0 6 {A382R:A -> A383R:A: adjacent_5p upward } 0 7 {A383R:A -> A382R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A727R:G 0 1 A728R:A 0 2 A729R:A 0 3 A730R:G 0 [Edges] 0 {A727R:G -> A728R:A: adjacent_5p } 0 1 {A728R:A -> A727R:G: adjacent_3p } 0 2 {A727R:G -> A730R:G: pairing antiparallel trans one_hbond 108 Sw/Hh } 0 3 {A730R:G -> A727R:G: pairing antiparallel trans one_hbond 108 Hh/Sw } 0 4 {A728R:A -> A729R:A: adjacent_5p upward } 0 5 {A729R:A -> A728R:A: adjacent_3p downward } 0 6 {A729R:A -> A730R:G: adjacent_5p upward } 0 7 {A730R:G -> A729R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A863R:U 0 1 A864R:A 0 2 A865R:A 0 3 A866R:C 0 [Edges] 0 {A863R:U -> A864R:A: adjacent_5p } 0 1 {A864R:A -> A863R:U: adjacent_3p } 0 2 {A863R:U -> A866R:C: pairing antiparallel trans one_hbond 97 Ss/Hw } 0 3 {A866R:C -> A863R:U: pairing antiparallel trans one_hbond 97 Hw/Ss } 0 4 {A864R:A -> A865R:A: adjacent_5p upward } 0 5 {A865R:A -> A864R:A: adjacent_3p downward } 0 6 {A865R:A -> A866R:C: adjacent_5p upward } 0 7 {A866R:C -> A865R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A898R:G 0 1 A899R:C 0 2 A900R:A 0 3 A901R:A 0 [Edges] 0 {A898R:G -> A899R:C: adjacent_5p } 0 1 {A899R:C -> A898R:G: adjacent_3p } 0 2 {A898R:G -> A901R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 3 {A901R:A -> A898R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 4 {A899R:C -> A900R:A: adjacent_5p upward } 0 5 {A900R:A -> A899R:C: adjacent_3p downward } 0 6 {A900R:A -> A901R:A: adjacent_5p upward } 0 7 {A901R:A -> A900R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A1013R:G 0 1 A1014R:A 0 2 A1015R:A 0 3 A1016R:A 0 [Edges] 0 {A1013R:G -> A1014R:A: adjacent_5p } 0 1 {A1014R:A -> A1013R:G: adjacent_3p } 0 2 {A1013R:G -> A1016R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 3 {A1016R:A -> A1013R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 4 {A1014R:A -> A1015R:A: adjacent_5p upward } 0 5 {A1015R:A -> A1014R:A: adjacent_3p downward } 0 6 {A1015R:A -> A1016R:A: adjacent_5p upward } 0 7 {A1016R:A -> A1015R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A1029R:C 0 1 A1030R:C 0 2 A1031R:G 0 3 A1032R:G 0 [Edges] 0 {A1029R:C -> A1030R:C: adjacent_5p upward } 0 1 {A1030R:C -> A1029R:C: adjacent_3p downward } 0 2 {A1029R:C -> A1032R:G: pairing antiparallel cis one_hbond Wh/Wh } 0 3 {A1032R:G -> A1029R:C: pairing antiparallel cis one_hbond Wh/Wh } 0 4 {A1030R:C -> A1031R:G: adjacent_5p } 0 5 {A1031R:G -> A1030R:C: adjacent_3p } 0 6 {A1031R:G -> A1032R:G: adjacent_5p } 0 7 {A1032R:G -> A1031R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A1238R:A 0 1 A1239R:A 0 2 A1240R:U 0 3 A1241R:G 0 [Edges] 0 {A1238R:A -> A1239R:A: adjacent_5p } 0 1 {A1239R:A -> A1238R:A: adjacent_3p } 0 2 {A1238R:A -> A1241R:G: pairing antiparallel cis 55 Ww/Ss } 0 3 {A1241R:G -> A1238R:A: pairing antiparallel cis 55 Ss/Ww } 0 4 {A1239R:A -> A1240R:U: adjacent_5p } 0 5 {A1240R:U -> A1239R:A: adjacent_3p } 0 6 {A1239R:A -> A1241R:G: outward } 0 7 {A1241R:G -> A1239R:A: outward } 0 8 {A1240R:U -> A1241R:G: adjacent_5p } 0 9 {A1241R:G -> A1240R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 6 2 . 5 . 8 3 3 7 9 . [GraphModel] [Vertices] 0 A1450R:U 0 1 A1451R:A 0 2 A1452R:C 0 3 A1453R:G 0 [Edges] 0 {A1450R:U -> A1451R:A: adjacent_5p } 0 1 {A1451R:A -> A1450R:U: adjacent_3p } 0 2 {A1450R:U -> A1453R:G: pairing parallel trans one_hbond Ws/Ww } 0 3 {A1453R:G -> A1450R:U: pairing parallel trans one_hbond Ww/Ws } 0 4 {A1451R:A -> A1452R:C: adjacent_5p } 0 5 {A1452R:C -> A1451R:A: adjacent_3p } 0 6 {A1452R:C -> A1453R:G: adjacent_5p } 0 7 {A1453R:G -> A1452R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A13R:U 0 1 A14R:U 0 2 A15R:C 0 3 A16R:G 0 [Edges] 0 {A13R:U -> A14R:U: adjacent_5p } 0 1 {A14R:U -> A13R:U: adjacent_3p } 0 2 {A13R:U -> A16R:G: pairing parallel trans one_hbond Bs/Ww } 0 3 {A16R:G -> A13R:U: pairing parallel trans one_hbond Ww/Bs } 0 4 {A14R:U -> A15R:C: adjacent_5p } 0 5 {A15R:C -> A14R:U: adjacent_3p } 0 6 {A15R:C -> A16R:G: adjacent_5p } 0 7 {A16R:G -> A15R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A13R:U 0 1 A14R:U 0 2 A15R:C 0 3 A16R:G 0 [Edges] 0 {A13R:U -> A14R:U: adjacent_5p } 0 1 {A14R:U -> A13R:U: adjacent_3p } 0 2 {A13R:U -> A16R:G: pairing parallel trans one_hbond Bs/Ww } 0 3 {A16R:G -> A13R:U: pairing parallel trans one_hbond Ww/Bs } 0 4 {A14R:U -> A15R:C: adjacent_5p } 0 5 {A15R:C -> A14R:U: adjacent_3p } 0 6 {A15R:C -> A16R:G: adjacent_5p } 0 7 {A16R:G -> A15R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 X34R:U 0 1 X35R:A 0 2 X36R:U 0 3 X37R:G 0 [Edges] 0 {X34R:U -> X35R:A: adjacent_5p } 0 1 {X35R:A -> X34R:U: adjacent_3p } 0 2 {X34R:U -> X37R:G: pairing antiparallel cis one_hbond Ss/Sw } 0 3 {X37R:G -> X34R:U: pairing antiparallel cis one_hbond Sw/Ss } 0 4 {X35R:A -> X36R:U: adjacent_5p } 0 5 {X36R:U -> X35R:A: adjacent_3p } 0 6 {X36R:U -> X37R:G: adjacent_5p } 0 7 {X37R:G -> X36R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A20R:A 0 1 A21R:C 0 2 A22R:A 0 3 A23R:A 0 [Edges] 0 {A20R:A -> A21R:C: adjacent_5p upward } 0 1 {A21R:C -> A20R:A: adjacent_3p downward } 0 2 {A20R:A -> A23R:A: pairing antiparallel trans 41 Ss/Hh } 0 3 {A23R:A -> A20R:A: pairing antiparallel trans 41 Hh/Ss } 0 4 {A21R:C -> A22R:A: adjacent_5p } 0 5 {A22R:A -> A21R:C: adjacent_3p } 0 6 {A22R:A -> A23R:A: adjacent_5p upward } 0 7 {A23R:A -> A22R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A271R:U 0 1 A272R:U 0 2 A284R:C 0 3 A285R:G 0 [Edges] 0 {A271R:U -> A272R:U: adjacent_5p } 0 1 {A272R:U -> A271R:U: adjacent_3p } 0 2 {A271R:U -> A285R:G: pairing parallel trans one_hbond Ws/Ww } 0 3 {A285R:G -> A271R:U: pairing parallel trans one_hbond Ww/Ws } 0 4 {A272R:U -> A284R:C: adjacent_5p } 0 5 {A284R:C -> A272R:U: adjacent_3p } 0 6 {A284R:C -> A285R:G: adjacent_5p } 0 7 {A285R:G -> A284R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A209R:G 0 1 A210R:G 0 2 A211R:A 0 3 A212R:A 0 [Edges] 0 {A209R:G -> A210R:G: adjacent_5p } 0 1 {A210R:G -> A209R:G: adjacent_3p } 0 2 {A209R:G -> A212R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A212R:A -> A209R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A210R:G -> A211R:A: adjacent_5p upward } 0 5 {A211R:A -> A210R:G: adjacent_3p downward } 0 6 {A211R:A -> A212R:A: adjacent_5p upward } 0 7 {A212R:A -> A211R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 5R:G 0 1 6R:A 0 2 7R:G 0 3 8R:A 0 [Edges] 0 {5R:G -> 6R:A: adjacent_5p } 0 1 {6R:A -> 5R:G: adjacent_3p } 0 2 {5R:G -> 8R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {8R:A -> 5R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {6R:A -> 7R:G: adjacent_5p upward } 0 5 {7R:G -> 6R:A: adjacent_3p downward } 0 6 {7R:G -> 8R:A: adjacent_5p upward } 0 7 {8R:A -> 7R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 5R:G 0 1 6R:C 0 2 7R:A 0 3 8R:A 0 [Edges] 0 {5R:G -> 6R:C: adjacent_5p } 0 1 {6R:C -> 5R:G: adjacent_3p } 0 2 {5R:G -> 8R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {8R:A -> 5R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {6R:C -> 7R:A: adjacent_5p upward } 0 5 {7R:A -> 6R:C: adjacent_3p downward } 0 6 {7R:A -> 8R:A: adjacent_5p upward } 0 7 {8R:A -> 7R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A13R:G 0 1 A14R:G 0 2 A15R:A 0 3 A16R:A 0 [Edges] 0 {A13R:G -> A14R:G: adjacent_5p } 0 1 {A14R:G -> A13R:G: adjacent_3p } 0 2 {A13R:G -> A16R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A16R:A -> A13R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A14R:G -> A15R:A: adjacent_5p upward } 0 5 {A15R:A -> A14R:G: adjacent_3p downward } 0 6 {A15R:A -> A16R:A: adjacent_5p upward } 0 7 {A16R:A -> A15R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 '2'10R:U 0 1 '2'11R:G 0 2 '2'12R:U 0 3 '2'13R:A 0 [Edges] 0 {'2'10R:U -> '2'11R:G: adjacent_5p downward } 0 1 {'2'11R:G -> '2'10R:U: adjacent_3p upward } 0 2 {'2'10R:U -> '2'13R:A: pairing parallel cis XXIII Ww/Hh } 0 3 {'2'13R:A -> '2'10R:U: pairing parallel cis XXIII Hh/Ww } 0 4 {'2'11R:G -> '2'12R:U: adjacent_5p } 0 5 {'2'12R:U -> '2'11R:G: adjacent_3p } 0 6 {'2'11R:G -> '2'13R:A: upward } 0 7 {'2'13R:A -> '2'11R:G: downward } 0 8 {'2'12R:U -> '2'13R:A: adjacent_5p } 0 9 {'2'13R:A -> '2'12R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 6 2 . 5 . 8 3 3 7 9 . MOLECULE: [GraphModel] [Vertices] 0 A20R:G 0 1 A21R:A 0 2 A22R:A 0 3 A23R:A 0 [Edges] 0 {A20R:G -> A21R:A: adjacent_5p } 0 1 {A21R:A -> A20R:G: adjacent_3p } 0 2 {A20R:G -> A23R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A23R:A -> A20R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A21R:A -> A22R:A: adjacent_5p upward } 0 5 {A22R:A -> A21R:A: adjacent_3p downward } 0 6 {A22R:A -> A23R:A: adjacent_5p upward } 0 7 {A23R:A -> A22R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 B63R:G 0 1 B64R:A 0 2 B65R:A 0 3 B66R:A 0 [Edges] 0 {B63R:G -> B64R:A: adjacent_5p } 0 1 {B64R:A -> B63R:G: adjacent_3p } 0 2 {B63R:G -> B66R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {B66R:A -> B63R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {B64R:A -> B65R:A: adjacent_5p upward } 0 5 {B65R:A -> B64R:A: adjacent_3p downward } 0 6 {B65R:A -> B66R:A: adjacent_5p upward } 0 7 {B66R:A -> B65R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A8R:A 0 1 A9R:G 0 2 A10R:U 0 3 A11R:G 0 [Edges] 0 {A8R:A -> A9R:G: adjacent_5p } 0 1 {A9R:G -> A8R:A: adjacent_3p } 0 2 {A8R:A -> A11R:G: pairing antiparallel cis one_hbond 58 Ss/Ws } 0 3 {A11R:G -> A8R:A: pairing antiparallel cis one_hbond 58 Ws/Ss } 0 4 {A9R:G -> A10R:U: adjacent_5p } 0 5 {A10R:U -> A9R:G: adjacent_3p } 0 6 {A10R:U -> A11R:G: adjacent_5p } 0 7 {A11R:G -> A10R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 A21R:U 0 1 A22R:U 0 2 A23R:C 0 3 A24R:G 0 [Edges] 0 {A21R:U -> A22R:U: adjacent_5p } 0 1 {A22R:U -> A21R:U: adjacent_3p } 0 2 {A21R:U -> A24R:G: pairing parallel trans one_hbond Bs/Ww } 0 3 {A24R:G -> A21R:U: pairing parallel trans one_hbond Ww/Bs } 0 4 {A22R:U -> A23R:C: adjacent_5p } 0 5 {A23R:C -> A22R:U: adjacent_3p } 0 6 {A23R:C -> A24R:G: adjacent_5p } 0 7 {A24R:G -> A23R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 B8R:C 0 1 B9R:U 0 2 B10R:G 0 3 B11R:G 0 [Edges] 0 {B8R:C -> B9R:U: adjacent_5p } 0 1 {B9R:U -> B8R:C: adjacent_3p } 0 2 {B8R:C -> B11R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {B11R:G -> B8R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {B9R:U -> B10R:G: adjacent_5p } 0 5 {B10R:G -> B9R:U: adjacent_3p } 0 6 {B10R:G -> B11R:G: adjacent_5p } 0 7 {B11R:G -> B10R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 C1935R:G 0 1 C1936R:A 0 2 C1937R:A 0 3 C1938R:A 0 [Edges] 0 {C1935R:G -> C1936R:A: adjacent_5p upward } 0 1 {C1936R:A -> C1935R:G: adjacent_3p downward } 0 2 {C1935R:G -> C1938R:A: pairing antiparallel cis one_hbond 55 Sw/Ww } 0 3 {C1938R:A -> C1935R:G: pairing antiparallel cis one_hbond 55 Ww/Sw } 0 4 {C1936R:A -> C1937R:A: adjacent_5p } 0 5 {C1937R:A -> C1936R:A: adjacent_3p } 0 6 {C1937R:A -> C1938R:A: adjacent_5p } 0 7 {C1938R:A -> C1937R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 D1935R:G 0 1 D1936R:A 0 2 D1937R:A 0 3 D1938R:A 0 [Edges] 0 {D1935R:G -> D1936R:A: adjacent_5p upward } 0 1 {D1936R:A -> D1935R:G: adjacent_3p downward } 0 2 {D1935R:G -> D1938R:A: pairing antiparallel cis one_hbond 55 Sw/Ww } 0 3 {D1938R:A -> D1935R:G: pairing antiparallel cis one_hbond 55 Ww/Sw } 0 4 {D1936R:A -> D1937R:A: adjacent_5p } 0 5 {D1937R:A -> D1936R:A: adjacent_3p } 0 6 {D1937R:A -> D1938R:A: adjacent_5p } 0 7 {D1938R:A -> D1937R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 B9R:G 0 1 B10R:G 0 2 B11R:C 0 3 B12R:G 0 [Edges] 0 {B9R:G -> B10R:G: adjacent_5p } 0 1 {B10R:G -> B9R:G: adjacent_3p } 0 2 {B9R:G -> B12R:G: pairing parallel cis VI Ww/Hh } 0 3 {B12R:G -> B9R:G: pairing parallel cis VI Hh/Ww } 0 4 {B10R:G -> B11R:C: adjacent_5p upward } 0 5 {B11R:C -> B10R:G: adjacent_3p downward } 0 6 {B11R:C -> B12R:G: adjacent_5p } 0 7 {B12R:G -> B11R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 E9R:G 0 1 E10R:G 0 2 E11R:C 0 3 E12R:G 0 [Edges] 0 {E9R:G -> E10R:G: adjacent_5p } 0 1 {E10R:G -> E9R:G: adjacent_3p } 0 2 {E9R:G -> E12R:G: pairing parallel cis VI Ww/Hh } 0 3 {E12R:G -> E9R:G: pairing parallel cis VI Hh/Ww } 0 4 {E10R:G -> E11R:C: adjacent_5p upward } 0 5 {E11R:C -> E10R:G: adjacent_3p downward } 0 6 {E11R:C -> E12R:G: adjacent_5p } 0 7 {E12R:G -> E11R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A10R:C 0 1 A11R:U 0 2 A12R:G 0 3 A13R:G 0 [Edges] 0 {A10R:C -> A11R:U: adjacent_5p } 0 1 {A11R:U -> A10R:C: adjacent_3p } 0 2 {A10R:C -> A13R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A13R:G -> A10R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A11R:U -> A12R:G: adjacent_5p } 0 5 {A12R:G -> A11R:U: adjacent_3p } 0 6 {A12R:G -> A13R:G: adjacent_5p } 0 7 {A13R:G -> A12R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A16R:U 0 1 A17R:U 0 2 A18R:C 0 3 A19R:G 0 [Edges] 0 {A16R:U -> A17R:U: adjacent_5p } 0 1 {A17R:U -> A16R:U: adjacent_3p } 0 2 {A16R:U -> A19R:G: pairing parallel trans one_hbond Ws/Ww } 0 3 {A19R:G -> A16R:U: pairing parallel trans one_hbond Ww/Ws } 0 4 {A17R:U -> A18R:C: adjacent_5p } 0 5 {A18R:C -> A17R:U: adjacent_3p } 0 6 {A18R:C -> A19R:G: adjacent_5p } 0 7 {A19R:G -> A18R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 C12R:G 0 1 C13R:C 0 2 C14R:A 0 3 C15R:A 0 [Edges] 0 {C12R:G -> C13R:C: adjacent_5p } 0 1 {C13R:C -> C12R:G: adjacent_3p } 0 2 {C12R:G -> C15R:A: pairing antiparallel trans one_hbond Ss/Hh } 0 3 {C15R:A -> C12R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 4 {C13R:C -> C14R:A: adjacent_5p upward } 0 5 {C14R:A -> C13R:C: adjacent_3p downward } 0 6 {C14R:A -> C15R:A: adjacent_5p upward } 0 7 {C15R:A -> C14R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . [GraphModel] [Vertices] 0 D12R:G 0 1 D13R:C 0 2 D14R:A 0 3 D15R:A 0 [Edges] 0 {D12R:G -> D13R:C: adjacent_5p } 0 1 {D13R:C -> D12R:G: adjacent_3p } 0 2 {D12R:G -> D15R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {D15R:A -> D12R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {D13R:C -> D14R:A: adjacent_5p upward } 0 5 {D14R:A -> D13R:C: adjacent_3p downward } 0 6 {D14R:A -> D15R:A: adjacent_5p upward } 0 7 {D15R:A -> D14R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 B6R:U 0 1 B7R:U 0 2 B8R:G 0 3 B9R:A 0 [Edges] 0 {B6R:U -> B7R:U: adjacent_5p } 0 1 {B7R:U -> B6R:U: adjacent_3p } 0 2 {B6R:U -> B8R:G: upward } 0 3 {B8R:G -> B6R:U: downward } 0 4 {B6R:U -> B9R:A: pairing antiparallel cis XX Ww/Ww } 0 5 {B9R:A -> B6R:U: pairing antiparallel cis XX Ww/Ww } 0 6 {B7R:U -> B8R:G: adjacent_5p } 0 7 {B8R:G -> B7R:U: adjacent_3p } 0 8 {B8R:G -> B9R:A: adjacent_5p } 0 9 {B9R:A -> B8R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 2 4 1 1 . 6 . 2 3 7 . 8 3 5 . 9 . MOLECULE: [GraphModel] [Vertices] 0 A11R:U 0 1 A12R:A 0 2 A13R:A 0 3 A14R:U 0 [Edges] 0 {A11R:U -> A12R:A: adjacent_5p } 0 1 {A12R:A -> A11R:U: adjacent_3p } 0 2 {A11R:U -> A14R:U: pairing antiparallel trans one_hbond Bs/Hh } 0 3 {A14R:U -> A11R:U: pairing antiparallel trans one_hbond Hh/Bs } 0 4 {A12R:A -> A13R:A: adjacent_5p } 0 5 {A13R:A -> A12R:A: adjacent_3p } 0 6 {A13R:A -> A14R:U: adjacent_5p } 0 7 {A14R:U -> A13R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 . MOLECULE: [GraphModel] [Vertices] 0 A14R:G 0 1 A15R:A 0 2 A16R:G 0 3 A17R:A 0 [Edges] 0 {A14R:G -> A15R:A: adjacent_5p } 0 1 {A15R:A -> A14R:G: adjacent_3p } 0 2 {A14R:G -> A17R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A17R:A -> A14R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A15R:A -> A16R:G: adjacent_5p upward } 0 5 {A16R:G -> A15R:A: adjacent_3p downward } 0 6 {A16R:G -> A17R:A: adjacent_5p upward } 0 7 {A17R:A -> A16R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 0 . 0 . 2 1 1 . 4 . 2 . 5 . 6 3 3 . 7 .