MOLECULE: [GraphModel] [Vertices] 0 A9R:G 0 1 A10R:A 0 2 A11R:C 0 3 A12R:A 0 4 A13R:A 0 [Edges] 0 {A9R:G -> A10R:A: adjacent_5p } 0 1 {A10R:A -> A9R:G: adjacent_3p } 0 2 {A9R:G -> A13R:A: pairing antiparallel trans one_hbond Bs/Hh } 0 3 {A13R:A -> A9R:G: pairing antiparallel trans one_hbond Hh/Bs } 0 4 {A10R:A -> A11R:C: adjacent_5p } 0 5 {A11R:C -> A10R:A: adjacent_3p } 0 6 {A10R:A -> A12R:A: upward } 0 7 {A12R:A -> A10R:A: downward } 0 8 {A11R:C -> A12R:A: adjacent_5p } 0 9 {A12R:A -> A11R:C: adjacent_3p } 0 10 {A12R:A -> A13R:A: adjacent_5p upward } 0 11 {A13R:A -> A12R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 6 . 2 . 5 . 8 . 3 . 7 9 . 10 4 3 . . 11 . MOLECULE: [GraphModel] [Vertices] 0 86R:G 0 1 87R:U 0 2 88R:C 0 3 89R:U 0 4 90R:C 0 [Edges] 0 {86R:G -> 87R:U: adjacent_5p } 0 1 {87R:U -> 86R:G: adjacent_3p } 0 2 {86R:G -> 90R:C: pairing antiparallel cis 128 Bs/Ww } 0 3 {90R:C -> 86R:G: pairing antiparallel cis 128 Ww/Bs } 0 4 {87R:U -> 88R:C: adjacent_5p } 0 5 {88R:C -> 87R:U: adjacent_3p } 0 6 {88R:C -> 89R:U: adjacent_5p } 0 7 {89R:U -> 88R:C: adjacent_3p } 0 8 {89R:U -> 90R:C: adjacent_5p } 0 9 {90R:C -> 89R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 7R:G 0 1 8R:G 0 2 9R:A 0 3 10R:A 0 4 11R:G 0 [Edges] 0 {7R:G -> 8R:G: adjacent_5p upward } 0 1 {8R:G -> 7R:G: adjacent_3p downward } 0 2 {7R:G -> 11R:G: pairing antiparallel trans Ww/Hh } 0 3 {11R:G -> 7R:G: pairing antiparallel trans Hh/Ww } 0 4 {8R:G -> 9R:A: adjacent_5p } 0 5 {9R:A -> 8R:G: adjacent_3p } 0 6 {9R:A -> 10R:A: adjacent_5p upward } 0 7 {10R:A -> 9R:A: adjacent_3p downward } 0 8 {10R:A -> 11R:G: adjacent_5p } 0 9 {11R:G -> 10R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . [GraphModel] [Vertices] 0 12R:A 0 1 13R:A 0 2 14R:A 0 3 15R:C 0 4 16R:U 0 [Edges] 0 {12R:A -> 13R:A: adjacent_5p } 0 1 {13R:A -> 12R:A: adjacent_3p } 0 2 {12R:A -> 16R:U: pairing parallel trans one_hbond Bs/Wh } 0 3 {16R:U -> 12R:A: pairing parallel trans one_hbond Wh/Bs } 0 4 {13R:A -> 14R:A: adjacent_5p upward } 0 5 {14R:A -> 13R:A: adjacent_3p downward } 0 6 {14R:A -> 15R:C: adjacent_5p upward } 0 7 {15R:C -> 14R:A: adjacent_3p downward } 0 8 {15R:C -> 16R:U: adjacent_5p upward } 0 9 {16R:U -> 15R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 R9R:A 0 1 R10R:A 0 2 R11R:C 0 3 R12R:A 0 4 R13R:A 0 [Edges] 0 {R9R:A -> R10R:A: adjacent_5p } 0 1 {R10R:A -> R9R:A: adjacent_3p } 0 2 {R9R:A -> R13R:A: pairing antiparallel trans V Hh/Ww } 0 3 {R13R:A -> R9R:A: pairing antiparallel trans V Ww/Hh } 0 4 {R10R:A -> R11R:C: adjacent_5p upward } 0 5 {R11R:C -> R10R:A: adjacent_3p downward } 0 6 {R11R:C -> R12R:A: adjacent_5p } 0 7 {R12R:A -> R11R:C: adjacent_3p } 0 8 {R12R:A -> R13R:A: adjacent_5p upward } 0 9 {R13R:A -> R12R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 9R:G 0 1 10R:G 0 2 11R:A 0 [Edges] 0 {9R:G -> 10R:G: adjacent_5p } 0 1 {10R:G -> 9R:G: adjacent_3p } 0 2 {9R:G -> 11R:A: pairing parallel cis one_hbond Wh/Hw } 0 3 {11R:A -> 9R:G: pairing parallel cis one_hbond Hw/Wh } 0 4 {10R:G -> 11R:A: adjacent_5p } 0 5 {11R:A -> 10R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A58R:G 0 1 A59R:A 0 2 A60R:U 0 3 A61R:G 0 4 A62R:G 0 [Edges] 0 {A58R:G -> A59R:A: adjacent_5p } 0 1 {A59R:A -> A58R:G: adjacent_3p } 0 2 {A58R:G -> A62R:G: pairing parallel cis one_hbond 113 Ws/Hw } 0 3 {A62R:G -> A58R:G: pairing parallel cis one_hbond 113 Hw/Ws } 0 4 {A59R:A -> A60R:U: adjacent_5p } 0 5 {A60R:U -> A59R:A: adjacent_3p } 0 6 {A60R:U -> A61R:G: adjacent_5p } 0 7 {A61R:G -> A60R:U: adjacent_3p } 0 8 {A61R:G -> A62R:G: adjacent_5p upward } 0 9 {A62R:G -> A61R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 B140R:G 0 1 B141R:C 0 2 B142R:A 0 [Edges] 0 {B140R:G -> B141R:C: adjacent_5p upward } 0 1 {B141R:C -> B140R:G: adjacent_3p downward } 0 2 {B140R:G -> B142R:A: pairing parallel cis one_hbond Ss/Hw } 0 3 {B142R:A -> B140R:G: pairing parallel cis one_hbond Hw/Ss } 0 4 {B141R:C -> B142R:A: adjacent_5p } 0 5 {B142R:A -> B141R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 G627R:U 0 1 G628R:G 0 2 G629R:C 0 [Edges] 0 {G627R:U -> G628R:G: adjacent_5p } 0 1 {G628R:G -> G627R:U: adjacent_3p } 0 2 {G627R:U -> G629R:C: pairing parallel cis one_hbond 99 Ws/Hw } 0 3 {G629R:C -> G627R:U: pairing parallel cis one_hbond 99 Hw/Ws } 0 4 {G628R:G -> G629R:C: adjacent_5p upward } 0 5 {G629R:C -> G628R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A6R:A 0 1 A7R:U 0 2 A8R:A 0 [Edges] 0 {A6R:A -> A7R:U: adjacent_5p } 0 1 {A7R:U -> A6R:A: adjacent_3p } 0 2 {A6R:A -> A8R:A: pairing antiparallel trans one_hbond 40 Ss/Wh } 0 3 {A8R:A -> A6R:A: pairing antiparallel trans one_hbond 40 Wh/Ss } 0 4 {A7R:U -> A8R:A: adjacent_5p } 0 5 {A8R:A -> A7R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A227R:U 0 1 A228R:G 0 2 A229R:C 0 [Edges] 0 {A227R:U -> A228R:G: adjacent_5p } 0 1 {A228R:G -> A227R:U: adjacent_3p } 0 2 {A227R:U -> A229R:C: pairing parallel cis one_hbond 99 Ws/Hw } 0 3 {A229R:C -> A227R:U: pairing parallel cis one_hbond 99 Hw/Ws } 0 4 {A228R:G -> A229R:C: adjacent_5p upward } 0 5 {A229R:C -> A228R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 B327R:U 0 1 B328R:G 0 2 B329R:C 0 [Edges] 0 {B327R:U -> B328R:G: adjacent_5p } 0 1 {B328R:G -> B327R:U: adjacent_3p } 0 2 {B327R:U -> B329R:C: pairing parallel cis one_hbond 99 Ws/Hw } 0 3 {B329R:C -> B327R:U: pairing parallel cis one_hbond 99 Hw/Ws } 0 4 {B328R:G -> B329R:C: adjacent_5p upward } 0 5 {B329R:C -> B328R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 C427R:U 0 1 C428R:G 0 2 C429R:C 0 [Edges] 0 {C427R:U -> C428R:G: adjacent_5p } 0 1 {C428R:G -> C427R:U: adjacent_3p } 0 2 {C427R:U -> C429R:C: pairing parallel cis one_hbond 99 Ws/Hw } 0 3 {C429R:C -> C427R:U: pairing parallel cis one_hbond 99 Hw/Ws } 0 4 {C428R:G -> C429R:C: adjacent_5p upward } 0 5 {C429R:C -> C428R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 B933R:U 0 1 B934R:C 0 2 B935R:U 0 3 B936R:G 0 4 B937R:A 0 [Edges] 0 {B933R:U -> B934R:C: adjacent_5p } 0 1 {B934R:C -> B933R:U: adjacent_3p } 0 2 {B933R:U -> B937R:A: pairing antiparallel trans one_hbond 45 Ss/Hw } 0 3 {B937R:A -> B933R:U: pairing antiparallel trans one_hbond 45 Hw/Ss } 0 4 {B934R:C -> B935R:U: adjacent_5p } 0 5 {B935R:U -> B934R:C: adjacent_3p } 0 6 {B935R:U -> B936R:G: adjacent_5p } 0 7 {B936R:G -> B935R:U: adjacent_3p } 0 8 {B935R:U -> B937R:A: upward } 0 9 {B937R:A -> B935R:U: downward } 0 10 {B936R:G -> B937R:A: adjacent_5p } 0 11 {B937R:A -> B936R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 8 3 . . 7 . 10 4 3 . 9 11 . [GraphModel] [Vertices] 0 B954R:U 0 1 B955R:U 0 2 B956R:C 0 3 B957R:G 0 4 B958R:A 0 [Edges] 0 {B954R:U -> B955R:U: adjacent_5p upward } 0 1 {B955R:U -> B954R:U: adjacent_3p downward } 0 2 {B954R:U -> B958R:A: pairing antiparallel trans one_hbond Ww/Hh } 0 3 {B958R:A -> B954R:U: pairing antiparallel trans one_hbond Hh/Ww } 0 4 {B955R:U -> B956R:C: adjacent_5p } 0 5 {B956R:C -> B955R:U: adjacent_3p } 0 6 {B956R:C -> B957R:G: adjacent_5p upward } 0 7 {B957R:G -> B956R:C: adjacent_3p downward } 0 8 {B957R:G -> B958R:A: adjacent_5p } 0 9 {B958R:A -> B957R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 B933R:U 0 1 B934R:C 0 2 B935R:U 0 3 B936R:G 0 4 B937R:A 0 [Edges] 0 {B933R:U -> B934R:C: adjacent_5p } 0 1 {B934R:C -> B933R:U: adjacent_3p } 0 2 {B933R:U -> B937R:A: pairing antiparallel trans one_hbond 45 Ss/Hw } 0 3 {B937R:A -> B933R:U: pairing antiparallel trans one_hbond 45 Hw/Ss } 0 4 {B934R:C -> B935R:U: adjacent_5p } 0 5 {B935R:U -> B934R:C: adjacent_3p } 0 6 {B935R:U -> B936R:G: adjacent_5p } 0 7 {B936R:G -> B935R:U: adjacent_3p } 0 8 {B935R:U -> B937R:A: upward } 0 9 {B937R:A -> B935R:U: downward } 0 10 {B936R:G -> B937R:A: adjacent_5p } 0 11 {B937R:A -> B936R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 8 3 . . 7 . 10 4 3 . 9 11 . [GraphModel] [Vertices] 0 B954R:U 0 1 B955R:U 0 2 B956R:C 0 3 B957R:G 0 4 B958R:A 0 [Edges] 0 {B954R:U -> B955R:U: adjacent_5p upward } 0 1 {B955R:U -> B954R:U: adjacent_3p downward } 0 2 {B954R:U -> B958R:A: pairing antiparallel trans XXIV Ws/Hh } 0 3 {B958R:A -> B954R:U: pairing antiparallel trans XXIV Hh/Ws } 0 4 {B955R:U -> B956R:C: adjacent_5p } 0 5 {B956R:C -> B955R:U: adjacent_3p } 0 6 {B956R:C -> B957R:G: adjacent_5p upward } 0 7 {B957R:G -> B956R:C: adjacent_3p downward } 0 8 {B957R:G -> B958R:A: adjacent_5p } 0 9 {B958R:A -> B957R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A25R:G 0 1 A26R:U 0 2 A27R:A 0 [Edges] 0 {A25R:G -> A26R:U: adjacent_5p upward } 0 1 {A26R:U -> A25R:G: adjacent_3p downward } 0 2 {A25R:G -> A27R:A: pairing parallel cis one_hbond 53 Bs/Hh } 0 3 {A27R:A -> A25R:G: pairing parallel cis one_hbond 53 Hh/Bs } 0 4 {A26R:U -> A27R:A: adjacent_5p } 0 5 {A27R:A -> A26R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 B8R:G 0 1 B9R:A 0 2 B10R:C 0 [Edges] 0 {B8R:G -> B9R:A: adjacent_5p } 0 1 {B9R:A -> B8R:G: adjacent_3p } 0 2 {B8R:G -> B10R:C: pairing antiparallel trans one_hbond Ss/Hh } 0 3 {B10R:C -> B8R:G: pairing antiparallel trans one_hbond Hh/Ss } 0 4 {B9R:A -> B10R:C: adjacent_5p upward } 0 5 {B10R:C -> B9R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A2116R:U 0 1 A2117R:U 0 2 A2118R:A 0 [Edges] 0 {A2116R:U -> A2117R:U: adjacent_5p } 0 1 {A2117R:U -> A2116R:U: adjacent_3p } 0 2 {A2116R:U -> A2118R:A: pairing parallel cis XXIII Ww/Hh } 0 3 {A2118R:A -> A2116R:U: pairing parallel cis XXIII Hh/Ww } 0 4 {A2117R:U -> A2118R:A: adjacent_5p } 0 5 {A2118R:A -> A2117R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 A2525R:G 0 1 A2526R:C 0 2 A2527R:U 0 [Edges] 0 {A2525R:G -> A2526R:C: adjacent_5p } 0 1 {A2526R:C -> A2525R:G: adjacent_3p } 0 2 {A2525R:G -> A2527R:U: pairing parallel cis one_hbond 89 Sw/Hw } 0 3 {A2527R:U -> A2525R:G: pairing parallel cis one_hbond 89 Hw/Sw } 0 4 {A2526R:C -> A2527R:U: adjacent_5p } 0 5 {A2527R:U -> A2526R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 A2554R:U 0 1 A2555R:C 0 2 A2556R:C 0 [Edges] 0 {A2554R:U -> A2555R:C: adjacent_5p } 0 1 {A2555R:C -> A2554R:U: adjacent_3p } 0 2 {A2554R:U -> A2556R:C: pairing parallel cis one_hbond 99 Ws/Hw } 0 3 {A2556R:C -> A2554R:U: pairing parallel cis one_hbond 99 Hw/Ws } 0 4 {A2555R:C -> A2556R:C: adjacent_5p } 0 5 {A2556R:C -> A2555R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 10R:G 0 1 11R:A 0 2 12R:U 0 [Edges] 0 {10R:G -> 11R:A: adjacent_5p } 0 1 {11R:A -> 10R:G: adjacent_3p } 0 2 {10R:G -> 12R:U: pairing parallel cis one_hbond 89 Sw/Hw } 0 3 {12R:U -> 10R:G: pairing parallel cis one_hbond 89 Hw/Sw } 0 4 {11R:A -> 12R:U: adjacent_5p } 0 5 {12R:U -> 11R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A12R:U 0 1 A13R:U 0 2 A14R:G 0 3 A15R:G 0 4 A16R:G 0 [Edges] 0 {A12R:U -> A13R:U: adjacent_5p } 0 1 {A13R:U -> A12R:U: adjacent_3p } 0 2 {A12R:U -> A16R:G: pairing parallel trans XXVII Ww/Ww } 0 3 {A16R:G -> A12R:U: pairing parallel trans XXVII Ww/Ww } 0 4 {A13R:U -> A14R:G: adjacent_5p } 0 5 {A14R:G -> A13R:U: adjacent_3p } 0 6 {A14R:G -> A15R:G: adjacent_5p upward } 0 7 {A15R:G -> A14R:G: adjacent_3p downward } 0 8 {A15R:G -> A16R:G: adjacent_5p } 0 9 {A16R:G -> A15R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A61R:U 0 1 A62R:C 0 2 A63R:G 0 [Edges] 0 {A61R:U -> A62R:C: adjacent_5p } 0 1 {A62R:C -> A61R:U: adjacent_3p } 0 2 {A61R:U -> A63R:G: pairing antiparallel cis one_hbond Hh/Hw } 0 3 {A63R:G -> A61R:U: pairing antiparallel cis one_hbond Hw/Hh } 0 4 {A62R:C -> A63R:G: adjacent_5p } 0 5 {A63R:G -> A62R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 B9R:U 0 1 B10R:C 0 2 B11R:C 0 3 B12R:C 0 4 B13R:G 0 [Edges] 0 {B9R:U -> B10R:C: adjacent_5p } 0 1 {B10R:C -> B9R:U: adjacent_3p } 0 2 {B9R:U -> B13R:G: pairing antiparallel trans one_hbond Hw/Ws } 0 3 {B13R:G -> B9R:U: pairing antiparallel trans one_hbond Ws/Hw } 0 4 {B10R:C -> B11R:C: adjacent_5p upward } 0 5 {B11R:C -> B10R:C: adjacent_3p downward } 0 6 {B11R:C -> B12R:C: adjacent_5p upward } 0 7 {B12R:C -> B11R:C: adjacent_3p downward } 0 8 {B12R:C -> B13R:G: adjacent_5p upward } 0 9 {B13R:G -> B12R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 C132R:U 0 1 C133R:U 0 2 C134R:A 0 3 C135R:A 0 4 C136R:A 0 [Edges] 0 {C132R:U -> C133R:U: adjacent_5p upward } 0 1 {C133R:U -> C132R:U: adjacent_3p downward } 0 2 {C132R:U -> C136R:A: pairing parallel trans XXI Ww/Ww } 0 3 {C136R:A -> C132R:U: pairing parallel trans XXI Ww/Ww } 0 4 {C133R:U -> C134R:A: adjacent_5p } 0 5 {C134R:A -> C133R:U: adjacent_3p } 0 6 {C134R:A -> C135R:A: adjacent_5p upward } 0 7 {C135R:A -> C134R:A: adjacent_3p downward } 0 8 {C135R:A -> C136R:A: adjacent_5p inward } 0 9 {C136R:A -> C135R:A: adjacent_3p inward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . [GraphModel] [Vertices] 0 D332R:U 0 1 D333R:U 0 2 D334R:A 0 3 D335R:A 0 4 D336R:A 0 [Edges] 0 {D332R:U -> D333R:U: adjacent_5p upward } 0 1 {D333R:U -> D332R:U: adjacent_3p downward } 0 2 {D332R:U -> D336R:A: pairing parallel trans XXI Ww/Ww } 0 3 {D336R:A -> D332R:U: pairing parallel trans XXI Ww/Ww } 0 4 {D333R:U -> D334R:A: adjacent_5p } 0 5 {D334R:A -> D333R:U: adjacent_3p } 0 6 {D334R:A -> D335R:A: adjacent_5p upward } 0 7 {D335R:A -> D334R:A: adjacent_3p downward } 0 8 {D335R:A -> D336R:A: adjacent_5p } 0 9 {D336R:A -> D335R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A8R:U 0 1 A9R:G 0 2 A10R:U 0 3 A11R:U 0 4 A12R:C 0 [Edges] 0 {A8R:U -> A9R:G: adjacent_5p } 0 1 {A9R:G -> A8R:U: adjacent_3p } 0 2 {A8R:U -> A11R:U: upward } 0 3 {A11R:U -> A8R:U: downward } 0 4 {A8R:U -> A12R:C: pairing antiparallel cis XVIII Ww/Ww } 0 5 {A12R:C -> A8R:U: pairing antiparallel cis XVIII Ww/Ww } 0 6 {A9R:G -> A10R:U: adjacent_5p } 0 7 {A10R:U -> A9R:G: adjacent_3p } 0 8 {A10R:U -> A11R:U: adjacent_5p } 0 9 {A11R:U -> A10R:U: adjacent_3p } 0 10 {A11R:U -> A12R:C: adjacent_5p } 0 11 {A12R:C -> A11R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . 2 4 1 1 . 6 . . 2 . 7 . 8 . 3 3 . 9 . 10 4 5 . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A5R:C 0 1 A6R:G 0 2 A7R:U 0 3 A8R:A 0 4 A9R:G 0 [Edges] 0 {A5R:C -> A6R:G: adjacent_5p } 0 1 {A6R:G -> A5R:C: adjacent_3p } 0 2 {A5R:C -> A9R:G: pairing antiparallel cis Ww/Ww } 0 3 {A9R:G -> A5R:C: pairing antiparallel cis Ww/Ww } 0 4 {A6R:G -> A7R:U: adjacent_5p } 0 5 {A7R:U -> A6R:G: adjacent_3p } 0 6 {A7R:U -> A8R:A: adjacent_5p } 0 7 {A8R:A -> A7R:U: adjacent_3p } 0 8 {A8R:A -> A9R:G: adjacent_5p } 0 9 {A9R:G -> A8R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A5R:C 0 1 A6R:U 0 2 A7R:U 0 3 A8R:A 0 4 A9R:G 0 [Edges] 0 {A5R:C -> A6R:U: adjacent_5p } 0 1 {A6R:U -> A5R:C: adjacent_3p } 0 2 {A5R:C -> A9R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A9R:G -> A5R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A6R:U -> A7R:U: adjacent_5p } 0 5 {A7R:U -> A6R:U: adjacent_3p } 0 6 {A7R:U -> A8R:A: adjacent_5p } 0 7 {A8R:A -> A7R:U: adjacent_3p } 0 8 {A8R:A -> A9R:G: adjacent_5p } 0 9 {A9R:G -> A8R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A8R:A 0 1 A9R:U 0 2 A10R:C 0 [Edges] 0 {A8R:A -> A9R:U: adjacent_5p } 0 1 {A9R:U -> A8R:A: adjacent_3p } 0 2 {A8R:A -> A10R:C: pairing parallel trans one_hbond Ss/Hw } 0 3 {A10R:C -> A8R:A: pairing parallel trans one_hbond Hw/Ss } 0 4 {A9R:U -> A10R:C: adjacent_5p } 0 5 {A10R:C -> A9R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A5R:C 0 1 A6R:U 0 2 A7R:A 0 3 A8R:U 0 4 A9R:G 0 [Edges] 0 {A5R:C -> A6R:U: adjacent_5p } 0 1 {A6R:U -> A5R:C: adjacent_3p } 0 2 {A5R:C -> A9R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A9R:G -> A5R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A6R:U -> A7R:A: adjacent_5p } 0 5 {A7R:A -> A6R:U: adjacent_3p } 0 6 {A7R:A -> A8R:U: adjacent_5p } 0 7 {A8R:U -> A7R:A: adjacent_3p } 0 8 {A7R:A -> A9R:G: outward } 0 9 {A9R:G -> A7R:A: outward } 0 10 {A8R:U -> A9R:G: adjacent_5p } 0 11 {A9R:G -> A8R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 8 3 . . 7 . 10 4 3 . 9 11 . MOLECULE: [GraphModel] [Vertices] 0 C953R:U 0 1 C954R:U 0 2 C955R:C 0 3 C956R:A 0 4 C957R:A 0 [Edges] 0 {C953R:U -> C954R:U: adjacent_5p upward } 0 1 {C954R:U -> C953R:U: adjacent_3p downward } 0 2 {C953R:U -> C957R:A: pairing antiparallel trans XXIV Ws/Hh } 0 3 {C957R:A -> C953R:U: pairing antiparallel trans XXIV Hh/Ws } 0 4 {C954R:U -> C955R:C: adjacent_5p } 0 5 {C955R:C -> C954R:U: adjacent_3p } 0 6 {C955R:C -> C956R:A: adjacent_5p upward } 0 7 {C956R:A -> C955R:C: adjacent_3p downward } 0 8 {C956R:A -> C957R:A: adjacent_5p } 0 9 {C957R:A -> C956R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 B555R:U 0 1 B556R:U 0 2 B557R:C 0 3 B558R:A 0 4 B559R:A 0 [Edges] 0 {B555R:U -> B556R:U: adjacent_5p upward } 0 1 {B556R:U -> B555R:U: adjacent_3p downward } 0 2 {B555R:U -> B559R:A: pairing antiparallel trans XXIV Ww/Hh } 0 3 {B559R:A -> B555R:U: pairing antiparallel trans XXIV Hh/Ww } 0 4 {B556R:U -> B557R:C: adjacent_5p } 0 5 {B557R:C -> B556R:U: adjacent_3p } 0 6 {B557R:C -> B558R:A: adjacent_5p upward } 0 7 {B558R:A -> B557R:C: adjacent_3p downward } 0 8 {B558R:A -> B559R:A: adjacent_5p } 0 9 {B559R:A -> B558R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A7R:U 0 1 A8R:U 0 2 A9R:U 0 [Edges] 0 {A7R:U -> A8R:U: adjacent_5p upward } 0 1 {A8R:U -> A7R:U: adjacent_3p downward } 0 2 {A7R:U -> A9R:U: pairing parallel cis one_hbond Ws/Hh } 0 3 {A9R:U -> A7R:U: pairing parallel cis one_hbond Hh/Ws } 0 4 {A8R:U -> A9R:U: adjacent_5p } 0 5 {A9R:U -> A8R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A5R:C 0 1 A6R:A 0 2 A7R:U 0 3 A8R:G 0 4 A9R:G 0 [Edges] 0 {A5R:C -> A6R:A: adjacent_5p } 0 1 {A6R:A -> A5R:C: adjacent_3p } 0 2 {A5R:C -> A9R:G: pairing antiparallel cis one_hbond Ww/Ww } 0 3 {A9R:G -> A5R:C: pairing antiparallel cis one_hbond Ww/Ww } 0 4 {A6R:A -> A7R:U: adjacent_5p } 0 5 {A7R:U -> A6R:A: adjacent_3p } 0 6 {A7R:U -> A8R:G: adjacent_5p } 0 7 {A8R:G -> A7R:U: adjacent_3p } 0 8 {A8R:G -> A9R:G: adjacent_5p } 0 9 {A9R:G -> A8R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A10R:C 0 1 A11R:U 0 2 A12R:C 0 3 A13R:A 0 4 A14R:A 0 [Edges] 0 {A10R:C -> A11R:U: adjacent_5p } 0 1 {A11R:U -> A10R:C: adjacent_3p } 0 2 {A10R:C -> A14R:A: pairing antiparallel cis one_hbond 75 Ww/Wh } 0 3 {A14R:A -> A10R:C: pairing antiparallel cis one_hbond 75 Wh/Ww } 0 4 {A11R:U -> A12R:C: adjacent_5p } 0 5 {A12R:C -> A11R:U: adjacent_3p } 0 6 {A12R:C -> A13R:A: adjacent_5p } 0 7 {A13R:A -> A12R:C: adjacent_3p } 0 8 {A13R:A -> A14R:A: adjacent_5p upward } 0 9 {A14R:A -> A13R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A9R:G 0 1 A10R:G 0 2 A11R:A 0 3 A12R:G 0 4 A13R:C 0 [Edges] 0 {A9R:G -> A10R:G: adjacent_5p } 0 1 {A10R:G -> A9R:G: adjacent_3p } 0 2 {A9R:G -> A13R:C: pairing parallel cis one_hbond 124 Wh/Wh } 0 3 {A13R:C -> A9R:G: pairing parallel cis one_hbond 124 Wh/Wh } 0 4 {A10R:G -> A11R:A: adjacent_5p upward } 0 5 {A11R:A -> A10R:G: adjacent_3p downward } 0 6 {A11R:A -> A12R:G: adjacent_5p upward } 0 7 {A12R:G -> A11R:A: adjacent_3p downward } 0 8 {A12R:G -> A13R:C: adjacent_5p upward } 0 9 {A13R:C -> A12R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 B33R:A 0 1 B34R:G 0 2 B35R:G 0 [Edges] 0 {B33R:A -> B34R:G: adjacent_5p } 0 1 {B34R:G -> B33R:A: adjacent_3p } 0 2 {B33R:A -> B35R:G: pairing antiparallel cis one_hbond 58 Ss/Ws } 0 3 {B35R:G -> B33R:A: pairing antiparallel cis one_hbond 58 Ws/Ss } 0 4 {B34R:G -> B35R:G: adjacent_5p } 0 5 {B35R:G -> B34R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A18R:G 0 1 A19R:A 0 2 A20R:G 0 3 A21R:A 0 4 A22R:A 0 [Edges] 0 {A18R:G -> A19R:A: adjacent_5p upward } 0 1 {A19R:A -> A18R:G: adjacent_3p downward } 0 2 {A18R:G -> A22R:A: pairing parallel trans one_hbond Ss/Bs } 0 3 {A22R:A -> A18R:G: pairing parallel trans one_hbond Bs/Ss } 0 4 {A19R:A -> A20R:G: adjacent_5p } 0 5 {A20R:G -> A19R:A: adjacent_3p } 0 6 {A20R:G -> A21R:A: adjacent_5p } 0 7 {A21R:A -> A20R:G: adjacent_3p } 0 8 {A21R:A -> A22R:A: adjacent_5p } 0 9 {A22R:A -> A21R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A8R:C 0 1 A9R:A 0 2 A10R:C 0 3 A11R:C 0 4 A12R:G 0 [Edges] 0 {A8R:C -> A9R:A: adjacent_5p } 0 1 {A9R:A -> A8R:C: adjacent_3p } 0 2 {A8R:C -> A12R:G: pairing antiparallel trans one_hbond 117 Wh/Hh } 0 3 {A12R:G -> A8R:C: pairing antiparallel trans one_hbond 117 Hh/Wh } 0 4 {A9R:A -> A10R:C: adjacent_5p upward } 0 5 {A10R:C -> A9R:A: adjacent_3p downward } 0 6 {A10R:C -> A11R:C: adjacent_5p } 0 7 {A11R:C -> A10R:C: adjacent_3p } 0 8 {A11R:C -> A12R:G: adjacent_5p upward } 0 9 {A12R:G -> A11R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A10R:U 0 1 A11R:A 0 2 A12R:C 0 3 A13R:G 0 4 A14R:G 0 [Edges] 0 {A10R:U -> A11R:A: adjacent_5p } 0 1 {A11R:A -> A10R:U: adjacent_3p } 0 2 {A10R:U -> A12R:C: upward } 0 3 {A12R:C -> A10R:U: downward } 0 4 {A10R:U -> A13R:G: pairing parallel trans one_hbond Bs/Ww } 0 5 {A13R:G -> A10R:U: pairing parallel trans one_hbond Ww/Bs } 0 6 {A10R:U -> A14R:G: pairing antiparallel cis one_hbond Ww/Wh } 0 7 {A14R:G -> A10R:U: pairing antiparallel cis one_hbond Wh/Ww } 0 8 {A11R:A -> A12R:C: adjacent_5p } 0 9 {A12R:C -> A11R:A: adjacent_3p } 0 10 {A12R:C -> A13R:G: adjacent_5p } 0 11 {A13R:G -> A12R:C: adjacent_3p } 0 12 {A13R:G -> A14R:G: adjacent_5p } 0 13 {A14R:G -> A13R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 2 4 6 1 1 . 8 . . 2 3 9 . 10 . 3 5 . 11 . 12 4 7 . . 13 . MOLECULE: [GraphModel] [Vertices] 0 D34R:A 0 1 D35R:C 0 2 D36R:C 0 [Edges] 0 {D34R:A -> D35R:C: adjacent_5p } 0 1 {D35R:C -> D34R:A: adjacent_3p } 0 2 {D34R:A -> D36R:C: pairing parallel trans one_hbond Ss/Hw } 0 3 {D36R:C -> D34R:A: pairing parallel trans one_hbond Hw/Ss } 0 4 {D35R:C -> D36R:C: adjacent_5p } 0 5 {D36R:C -> D35R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 C1082R:U 0 1 C1083R:U 0 2 C1084R:A 0 3 C1085R:A 0 4 C1086R:A 0 [Edges] 0 {C1082R:U -> C1083R:U: adjacent_5p upward } 0 1 {C1083R:U -> C1082R:U: adjacent_3p downward } 0 2 {C1082R:U -> C1086R:A: pairing parallel trans XXI Ws/Ww } 0 3 {C1086R:A -> C1082R:U: pairing parallel trans XXI Ww/Ws } 0 4 {C1083R:U -> C1084R:A: adjacent_5p } 0 5 {C1084R:A -> C1083R:U: adjacent_3p } 0 6 {C1084R:A -> C1085R:A: adjacent_5p upward } 0 7 {C1085R:A -> C1084R:A: adjacent_3p downward } 0 8 {C1085R:A -> C1086R:A: adjacent_5p inward } 0 9 {C1086R:A -> C1085R:A: adjacent_3p inward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . [GraphModel] [Vertices] 0 D1082R:U 0 1 D1083R:U 0 2 D1084R:A 0 3 D1085R:A 0 4 D1086R:A 0 [Edges] 0 {D1082R:U -> D1083R:U: adjacent_5p upward } 0 1 {D1083R:U -> D1082R:U: adjacent_3p downward } 0 2 {D1082R:U -> D1086R:A: pairing parallel trans XXI Ws/Ww } 0 3 {D1086R:A -> D1082R:U: pairing parallel trans XXI Ww/Ws } 0 4 {D1083R:U -> D1084R:A: adjacent_5p } 0 5 {D1084R:A -> D1083R:U: adjacent_3p } 0 6 {D1084R:A -> D1085R:A: adjacent_5p upward } 0 7 {D1085R:A -> D1084R:A: adjacent_3p downward } 0 8 {D1085R:A -> D1086R:A: adjacent_5p inward } 0 9 {D1086R:A -> D1085R:A: adjacent_3p inward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A10R:G 0 1 A11R:G 0 2 A12R:A 0 [Edges] 0 {A10R:G -> A11R:G: adjacent_5p upward } 0 1 {A11R:G -> A10R:G: adjacent_3p downward } 0 2 {A10R:G -> A12R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A12R:A -> A10R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A11R:G -> A12R:A: adjacent_5p } 0 5 {A12R:A -> A11R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 B24R:G 0 1 B25R:G 0 2 B26R:A 0 [Edges] 0 {B24R:G -> B25R:G: adjacent_5p upward } 0 1 {B25R:G -> B24R:G: adjacent_3p downward } 0 2 {B24R:G -> B26R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {B26R:A -> B24R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {B25R:G -> B26R:A: adjacent_5p } 0 5 {B26R:A -> B25R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 B38R:U 0 1 B39R:G 0 2 B40R:A 0 3 B41R:A 0 4 B42R:A 0 [Edges] 0 {B38R:U -> B39R:G: adjacent_5p upward } 0 1 {B39R:G -> B38R:U: adjacent_3p downward } 0 2 {B38R:U -> B42R:A: pairing antiparallel trans XXIV Ws/Hh } 0 3 {B42R:A -> B38R:U: pairing antiparallel trans XXIV Hh/Ws } 0 4 {B39R:G -> B40R:A: adjacent_5p } 0 5 {B40R:A -> B39R:G: adjacent_3p } 0 6 {B40R:A -> B41R:A: adjacent_5p upward } 0 7 {B41R:A -> B40R:A: adjacent_3p downward } 0 8 {B41R:A -> B42R:A: adjacent_5p } 0 9 {B42R:A -> B41R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 C515R:G 0 1 C516R:C 0 2 C518R:G 0 3 C519R:G 0 4 C520R:U 0 [Edges] 0 {C515R:G -> C516R:C: adjacent_5p } 0 1 {C516R:C -> C515R:G: adjacent_3p } 0 2 {C515R:G -> C520R:U: pairing antiparallel cis one_hbond Sw/Wh } 0 3 {C520R:U -> C515R:G: pairing antiparallel cis one_hbond Wh/Sw } 0 4 {C516R:C -> C518R:G: adjacent_5p } 0 5 {C518R:G -> C516R:C: adjacent_3p } 0 6 {C518R:G -> C519R:G: adjacent_5p } 0 7 {C519R:G -> C518R:G: adjacent_3p } 0 8 {C519R:G -> C520R:U: adjacent_5p } 0 9 {C520R:U -> C519R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . [GraphModel] [Vertices] 0 C554R:U 0 1 C555R:U 0 2 C556R:C 0 3 C557R:G 0 4 C558R:A 0 [Edges] 0 {C554R:U -> C555R:U: adjacent_5p upward } 0 1 {C555R:U -> C554R:U: adjacent_3p downward } 0 2 {C554R:U -> C558R:A: pairing antiparallel trans XXIV Ws/Hh } 0 3 {C558R:A -> C554R:U: pairing antiparallel trans XXIV Hh/Ws } 0 4 {C555R:U -> C556R:C: adjacent_5p } 0 5 {C556R:C -> C555R:U: adjacent_3p } 0 6 {C556R:C -> C557R:G: adjacent_5p upward } 0 7 {C557R:G -> C556R:C: adjacent_3p downward } 0 8 {C557R:G -> C558R:A: adjacent_5p } 0 9 {C558R:A -> C557R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . [GraphModel] [Vertices] 0 D515R:G 0 1 D516R:C 0 2 D518R:G 0 3 D519R:G 0 4 D520R:U 0 [Edges] 0 {D515R:G -> D516R:C: adjacent_5p } 0 1 {D516R:C -> D515R:G: adjacent_3p } 0 2 {D515R:G -> D520R:U: pairing antiparallel cis one_hbond Sw/Wh } 0 3 {D520R:U -> D515R:G: pairing antiparallel cis one_hbond Wh/Sw } 0 4 {D516R:C -> D518R:G: adjacent_5p } 0 5 {D518R:G -> D516R:C: adjacent_3p } 0 6 {D518R:G -> D519R:G: adjacent_5p } 0 7 {D519R:G -> D518R:G: adjacent_3p } 0 8 {D519R:G -> D520R:U: adjacent_5p } 0 9 {D520R:U -> D519R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . [GraphModel] [Vertices] 0 D554R:U 0 1 D555R:U 0 2 D556R:C 0 3 D557R:G 0 4 D558R:A 0 [Edges] 0 {D554R:U -> D555R:U: adjacent_5p upward } 0 1 {D555R:U -> D554R:U: adjacent_3p downward } 0 2 {D554R:U -> D558R:A: pairing antiparallel trans XXIV Ws/Hh } 0 3 {D558R:A -> D554R:U: pairing antiparallel trans XXIV Hh/Ws } 0 4 {D555R:U -> D556R:C: adjacent_5p } 0 5 {D556R:C -> D555R:U: adjacent_3p } 0 6 {D556R:C -> D557R:G: adjacent_5p upward } 0 7 {D557R:G -> D556R:C: adjacent_3p downward } 0 8 {D557R:G -> D558R:A: adjacent_5p } 0 9 {D558R:A -> D557R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A14R:C 0 1 A15R:G 0 2 A16R:C 0 [Edges] 0 {A14R:C -> A15R:G: adjacent_5p } 0 1 {A15R:G -> A14R:C: adjacent_3p } 0 2 {A14R:C -> A16R:C: pairing antiparallel cis one_hbond 137 Wh/Ws } 0 3 {A16R:C -> A14R:C: pairing antiparallel cis one_hbond 137 Ws/Wh } 0 4 {A15R:G -> A16R:C: adjacent_5p } 0 5 {A16R:C -> A15R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A13R:C 0 1 A14R:A 0 2 A15R:G 0 3 A16R:U 0 4 A17R:G 0 [Edges] 0 {A13R:C -> A14R:A: adjacent_5p upward } 0 1 {A14R:A -> A13R:C: adjacent_3p downward } 0 2 {A13R:C -> A17R:G: pairing antiparallel cis XIX Ww/Ww } 0 3 {A17R:G -> A13R:C: pairing antiparallel cis XIX Ww/Ww } 0 4 {A14R:A -> A15R:G: adjacent_5p } 0 5 {A15R:G -> A14R:A: adjacent_3p } 0 6 {A14R:A -> A17R:G: outward } 0 7 {A17R:G -> A14R:A: outward } 0 8 {A15R:G -> A16R:U: adjacent_5p } 0 9 {A16R:U -> A15R:G: adjacent_3p } 0 10 {A16R:U -> A17R:G: adjacent_5p } 0 11 {A17R:G -> A16R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . 6 2 . 5 . 8 . 3 . . 9 . 10 4 3 7 . 11 . MOLECULE: [GraphModel] [Vertices] 0 A10R:G 0 1 A11R:C 0 2 A12R:A 0 3 A13R:U 0 4 A14R:A 0 [Edges] 0 {A10R:G -> A11R:C: adjacent_5p } 0 1 {A11R:C -> A10R:G: adjacent_3p } 0 2 {A10R:G -> A13R:U: pairing antiparallel cis one_hbond 85 Sw/Ws } 0 3 {A13R:U -> A10R:G: pairing antiparallel cis one_hbond 85 Ws/Sw } 0 4 {A10R:G -> A14R:A: pairing antiparallel trans XI Ss/Hh } 0 5 {A14R:A -> A10R:G: pairing antiparallel trans XI Hh/Ss } 0 6 {A11R:C -> A12R:A: adjacent_5p } 0 7 {A12R:A -> A11R:C: adjacent_3p } 0 8 {A12R:A -> A13R:U: adjacent_5p } 0 9 {A13R:U -> A12R:A: adjacent_3p } 0 10 {A13R:U -> A14R:A: adjacent_5p } 0 11 {A14R:A -> A13R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . 2 4 1 1 . 6 . . 2 . 7 . 8 . 3 3 . 9 . 10 4 5 . . 11 . MOLECULE: [GraphModel] [Vertices] 0 A13R:G 0 1 A14R:A 0 2 A15R:G 0 3 A16R:A 0 4 A17R:A 0 [Edges] 0 {A13R:G -> A14R:A: adjacent_5p } 0 1 {A14R:A -> A13R:G: adjacent_3p } 0 2 {A13R:G -> A17R:A: pairing antiparallel trans one_hbond Sw/Hh } 0 3 {A17R:A -> A13R:G: pairing antiparallel trans one_hbond Hh/Sw } 0 4 {A14R:A -> A15R:G: adjacent_5p upward } 0 5 {A15R:G -> A14R:A: adjacent_3p downward } 0 6 {A15R:G -> A16R:A: adjacent_5p } 0 7 {A16R:A -> A15R:G: adjacent_3p } 0 8 {A15R:G -> A17R:A: upward } 0 9 {A17R:A -> A15R:G: downward } 0 10 {A16R:A -> A17R:A: adjacent_5p } 0 11 {A17R:A -> A16R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 8 3 . . 7 . 10 4 3 . 9 11 . MOLECULE: [GraphModel] [Vertices] 0 A10R:G 0 1 A11R:C 0 2 A12R:A 0 3 A13R:U 0 4 A14R:A 0 [Edges] 0 {A10R:G -> A11R:C: adjacent_5p } 0 1 {A11R:C -> A10R:G: adjacent_3p } 0 2 {A10R:G -> A14R:A: pairing antiparallel trans XI Ss/Hh } 0 3 {A14R:A -> A10R:G: pairing antiparallel trans XI Hh/Ss } 0 4 {A11R:C -> A12R:A: adjacent_5p } 0 5 {A12R:A -> A11R:C: adjacent_3p } 0 6 {A12R:A -> A13R:U: adjacent_5p } 0 7 {A13R:U -> A12R:A: adjacent_3p } 0 8 {A12R:A -> A14R:A: upward } 0 9 {A14R:A -> A12R:A: downward } 0 10 {A13R:U -> A14R:A: adjacent_5p } 0 11 {A14R:A -> A13R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 8 3 . . 7 . 10 4 3 . 9 11 . MOLECULE: [GraphModel] [Vertices] 0 C1082R:U 0 1 C1083R:U 0 2 C1084R:A 0 3 C1085R:A 0 4 C1086R:A 0 [Edges] 0 {C1082R:U -> C1083R:U: adjacent_5p upward } 0 1 {C1083R:U -> C1082R:U: adjacent_3p downward } 0 2 {C1082R:U -> C1086R:A: pairing parallel trans XXI Ws/Ww } 0 3 {C1086R:A -> C1082R:U: pairing parallel trans XXI Ww/Ws } 0 4 {C1083R:U -> C1084R:A: adjacent_5p } 0 5 {C1084R:A -> C1083R:U: adjacent_3p } 0 6 {C1084R:A -> C1085R:A: adjacent_5p upward } 0 7 {C1085R:A -> C1084R:A: adjacent_3p downward } 0 8 {C1085R:A -> C1086R:A: adjacent_5p inward } 0 9 {C1086R:A -> C1085R:A: adjacent_3p inward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A6R:U 0 1 A7R:U 0 2 A8R:G 0 3 A9R:G 0 4 A10R:G 0 [Edges] 0 {A6R:U -> A7R:U: adjacent_5p } 0 1 {A7R:U -> A6R:U: adjacent_3p } 0 2 {A6R:U -> A10R:G: pairing antiparallel cis XXVIII Ws/Ww } 0 3 {A10R:G -> A6R:U: pairing antiparallel cis XXVIII Ww/Ws } 0 4 {A7R:U -> A8R:G: adjacent_5p } 0 5 {A8R:G -> A7R:U: adjacent_3p } 0 6 {A8R:G -> A9R:G: adjacent_5p } 0 7 {A9R:G -> A8R:G: adjacent_3p } 0 8 {A9R:G -> A10R:G: adjacent_5p } 0 9 {A10R:G -> A9R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A29R:G 0 1 A30R:A 0 2 A31R:A 0 [Edges] 0 {A29R:G -> A30R:A: adjacent_5p } 0 1 {A30R:A -> A29R:G: adjacent_3p } 0 2 {A29R:G -> A31R:A: pairing parallel trans X Ss/Ww } 0 3 {A31R:A -> A29R:G: pairing parallel trans X Ww/Ss } 0 4 {A30R:A -> A31R:A: adjacent_5p } 0 5 {A31R:A -> A30R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 T54R:U 0 1 T55R:U 0 2 T56R:C 0 3 T57R:A 0 4 T58R:A 0 [Edges] 0 {T54R:U -> T55R:U: adjacent_5p upward } 0 1 {T55R:U -> T54R:U: adjacent_3p downward } 0 2 {T54R:U -> T58R:A: pairing antiparallel trans XXIV Ws/Hh } 0 3 {T58R:A -> T54R:U: pairing antiparallel trans XXIV Hh/Ws } 0 4 {T55R:U -> T56R:C: adjacent_5p } 0 5 {T56R:C -> T55R:U: adjacent_3p } 0 6 {T56R:C -> T57R:A: adjacent_5p upward } 0 7 {T57R:A -> T56R:C: adjacent_3p downward } 0 8 {T57R:A -> T58R:A: adjacent_5p } 0 9 {T58R:A -> T57R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A13R:U 0 1 A14R:C 0 2 A15R:A 0 [Edges] 0 {A13R:U -> A14R:C: adjacent_5p } 0 1 {A14R:C -> A13R:U: adjacent_3p } 0 2 {A13R:U -> A15R:A: pairing parallel cis one_hbond 47 Ws/Hw } 0 3 {A15R:A -> A13R:U: pairing parallel cis one_hbond 47 Hw/Ws } 0 4 {A14R:C -> A15R:A: adjacent_5p upward } 0 5 {A15R:A -> A14R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 7R:G 0 1 8R:G 0 2 9R:A 0 3 10R:A 0 4 11R:G 0 [Edges] 0 {7R:G -> 8R:G: adjacent_5p upward } 0 1 {8R:G -> 7R:G: adjacent_3p downward } 0 2 {7R:G -> 11R:G: pairing antiparallel trans VII Ww/Hh } 0 3 {11R:G -> 7R:G: pairing antiparallel trans VII Hh/Ww } 0 4 {8R:G -> 9R:A: adjacent_5p } 0 5 {9R:A -> 8R:G: adjacent_3p } 0 6 {9R:A -> 10R:A: adjacent_5p upward } 0 7 {10R:A -> 9R:A: adjacent_3p downward } 0 8 {10R:A -> 11R:G: adjacent_5p } 0 9 {11R:G -> 10R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 4R:G 0 1 5R:C 0 2 6R:U 0 [Edges] 0 {4R:G -> 5R:C: adjacent_5p upward } 0 1 {5R:C -> 4R:G: adjacent_3p downward } 0 2 {4R:G -> 6R:U: pairing antiparallel trans one_hbond Sw/Wh } 0 3 {6R:U -> 4R:G: pairing antiparallel trans one_hbond Wh/Sw } 0 4 {5R:C -> 6R:U: adjacent_5p } 0 5 {6R:U -> 5R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 T9R:G 0 1 T10R:C 0 2 T11R:C 0 3 T12R:C 0 4 T13R:G 0 [Edges] 0 {T9R:G -> T10R:C: adjacent_5p } 0 1 {T10R:C -> T9R:G: adjacent_3p } 0 2 {T9R:G -> T13R:G: pairing antiparallel trans VII Hh/Ww } 0 3 {T13R:G -> T9R:G: pairing antiparallel trans VII Ww/Hh } 0 4 {T10R:C -> T11R:C: adjacent_5p upward } 0 5 {T11R:C -> T10R:C: adjacent_3p downward } 0 6 {T11R:C -> T12R:C: adjacent_5p } 0 7 {T12R:C -> T11R:C: adjacent_3p } 0 8 {T12R:C -> T13R:G: adjacent_5p upward } 0 9 {T13R:G -> T12R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 R141R:C 0 1 R142R:A 0 2 R143R:A 0 [Edges] 0 {R141R:C -> R142R:A: adjacent_5p } 0 1 {R142R:A -> R141R:C: adjacent_3p } 0 2 {R141R:C -> R143R:A: pairing parallel cis one_hbond 80 Ws/Hw } 0 3 {R143R:A -> R141R:C: pairing parallel cis one_hbond 80 Hw/Ws } 0 4 {R142R:A -> R143R:A: adjacent_5p upward } 0 5 {R143R:A -> R142R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A10R:G 0 1 A11R:C 0 2 A12R:A 0 3 A13R:U 0 4 A14R:A 0 [Edges] 0 {A10R:G -> A11R:C: adjacent_5p } 0 1 {A11R:C -> A10R:G: adjacent_3p } 0 2 {A10R:G -> A14R:A: pairing antiparallel trans one_hbond 63 Ss/Wh } 0 3 {A14R:A -> A10R:G: pairing antiparallel trans one_hbond 63 Wh/Ss } 0 4 {A11R:C -> A12R:A: adjacent_5p } 0 5 {A12R:A -> A11R:C: adjacent_3p } 0 6 {A12R:A -> A13R:U: adjacent_5p } 0 7 {A13R:U -> A12R:A: adjacent_3p } 0 8 {A12R:A -> A14R:A: upward } 0 9 {A14R:A -> A12R:A: downward } 0 10 {A13R:U -> A14R:A: adjacent_5p } 0 11 {A14R:A -> A13R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 8 3 . . 7 . 10 4 3 . 9 11 . MOLECULE: [GraphModel] [Vertices] 0 A9R:A 0 1 A10R:A 0 2 A11R:C 0 3 A12R:A 0 4 A13R:A 0 [Edges] 0 {A9R:A -> A10R:A: adjacent_5p } 0 1 {A10R:A -> A9R:A: adjacent_3p } 0 2 {A9R:A -> A13R:A: pairing antiparallel trans V Hh/Ww } 0 3 {A13R:A -> A9R:A: pairing antiparallel trans V Ww/Hh } 0 4 {A10R:A -> A11R:C: adjacent_5p upward } 0 5 {A11R:C -> A10R:A: adjacent_3p downward } 0 6 {A11R:C -> A12R:A: adjacent_5p upward } 0 7 {A12R:A -> A11R:C: adjacent_3p downward } 0 8 {A12R:A -> A13R:A: adjacent_5p upward } 0 9 {A13R:A -> A12R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . [GraphModel] [Vertices] 0 A54R:U 0 1 A55R:U 0 2 A56R:C 0 3 A57R:G 0 4 A58R:A 0 [Edges] 0 {A54R:U -> A55R:U: adjacent_5p upward } 0 1 {A55R:U -> A54R:U: adjacent_3p downward } 0 2 {A54R:U -> A58R:A: pairing antiparallel trans one_hbond Ws/Hw } 0 3 {A58R:A -> A54R:U: pairing antiparallel trans one_hbond Hw/Ws } 0 4 {A55R:U -> A56R:C: adjacent_5p } 0 5 {A56R:C -> A55R:U: adjacent_3p } 0 6 {A56R:C -> A57R:G: adjacent_5p upward } 0 7 {A57R:G -> A56R:C: adjacent_3p downward } 0 8 {A57R:G -> A58R:A: adjacent_5p } 0 9 {A58R:A -> A57R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 B338R:G 0 1 B339R:G 0 2 B340R:A 0 [Edges] 0 {B338R:G -> B339R:G: adjacent_5p } 0 1 {B339R:G -> B338R:G: adjacent_3p } 0 2 {B338R:G -> B340R:A: pairing antiparallel cis one_hbond Sw/Hh } 0 3 {B340R:A -> B338R:G: pairing antiparallel cis one_hbond Hh/Sw } 0 4 {B339R:G -> B340R:A: adjacent_5p } 0 5 {B340R:A -> B339R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A47R:U 0 1 A48R:U 0 2 A49R:U 0 3 A50R:C 0 4 A51R:U 0 [Edges] 0 {A47R:U -> A48R:U: adjacent_5p } 0 1 {A48R:U -> A47R:U: adjacent_3p } 0 2 {A47R:U -> A51R:U: pairing antiparallel trans one_hbond 81 Ww/Hw } 0 3 {A51R:U -> A47R:U: pairing antiparallel trans one_hbond 81 Hw/Ww } 0 4 {A48R:U -> A49R:U: adjacent_5p } 0 5 {A49R:U -> A48R:U: adjacent_3p } 0 6 {A49R:U -> A50R:C: adjacent_5p } 0 7 {A50R:C -> A49R:U: adjacent_3p } 0 8 {A50R:C -> A51R:U: adjacent_5p upward } 0 9 {A51R:U -> A50R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 A164R:C 0 1 A165R:A 0 2 A166R:A 0 [Edges] 0 {A164R:C -> A165R:A: adjacent_5p } 0 1 {A165R:A -> A164R:C: adjacent_3p } 0 2 {A164R:C -> A166R:A: pairing parallel cis one_hbond Ss/Hw } 0 3 {A166R:A -> A164R:C: pairing parallel cis one_hbond Hw/Ss } 0 4 {A165R:A -> A166R:A: adjacent_5p } 0 5 {A166R:A -> A165R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 A219R:C 0 1 A220R:A 0 2 A221R:C 0 [Edges] 0 {A219R:C -> A220R:A: adjacent_5p } 0 1 {A220R:A -> A219R:C: adjacent_3p } 0 2 {A219R:C -> A221R:C: pairing parallel cis one_hbond Ss/Hw } 0 3 {A221R:C -> A219R:C: pairing parallel cis one_hbond Hw/Ss } 0 4 {A220R:A -> A221R:C: adjacent_5p } 0 5 {A221R:C -> A220R:A: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A33R:G 0 1 A34R:C 0 2 A35R:C 0 [Edges] 0 {A33R:G -> A34R:C: adjacent_5p } 0 1 {A34R:C -> A33R:G: adjacent_3p } 0 2 {A33R:G -> A35R:C: pairing antiparallel cis one_hbond 116 Hh/Hw } 0 3 {A35R:C -> A33R:G: pairing antiparallel cis one_hbond 116 Hw/Hh } 0 4 {A34R:C -> A35R:C: adjacent_5p } 0 5 {A35R:C -> A34R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 B23R:U 0 1 B24R:C 0 2 B25R:U 0 3 B26R:G 0 4 B27R:A 0 [Edges] 0 {B23R:U -> B24R:C: adjacent_5p } 0 1 {B24R:C -> B23R:U: adjacent_3p } 0 2 {B23R:U -> B27R:A: pairing parallel cis XXIII Ww/Hh } 0 3 {B27R:A -> B23R:U: pairing parallel cis XXIII Hh/Ww } 0 4 {B24R:C -> B25R:U: adjacent_5p } 0 5 {B25R:U -> B24R:C: adjacent_3p } 0 6 {B25R:U -> B26R:G: adjacent_5p } 0 7 {B26R:G -> B25R:U: adjacent_3p } 0 8 {B26R:G -> B27R:A: adjacent_5p upward } 0 9 {B27R:A -> B26R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 5R:G 0 1 6R:G 0 2 7R:G 0 3 8R:G 0 4 9R:C 0 [Edges] 0 {5R:G -> 6R:G: adjacent_5p } 0 1 {6R:G -> 5R:G: adjacent_3p } 0 2 {5R:G -> 9R:C: pairing parallel trans 119 Ss/Ww } 0 3 {9R:C -> 5R:G: pairing parallel trans 119 Ww/Ss } 0 4 {6R:G -> 7R:G: adjacent_5p } 0 5 {7R:G -> 6R:G: adjacent_3p } 0 6 {7R:G -> 8R:G: adjacent_5p } 0 7 {8R:G -> 7R:G: adjacent_3p } 0 8 {8R:G -> 9R:C: adjacent_5p } 0 9 {9R:C -> 8R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 3 4 0 . 0 . . 2 1 1 . 4 . . 2 . 5 . 6 . 3 . . 7 . 8 4 3 . . 9 . MOLECULE: [GraphModel] [Vertices] 0 '0'184R:G 0 1 '0'185R:G 0 2 '0'186R:A 0 [Edges] 0 {'0'184R:G -> '0'185R:G: adjacent_5p upward } 0 1 {'0'185R:G -> '0'184R:G: adjacent_3p downward } 0 2 {'0'184R:G -> '0'186R:A: pairing antiparallel cis one_hbond Sw/Ss } 0 3 {'0'186R:A -> '0'184R:G: pairing antiparallel cis one_hbond Ss/Sw } 0 4 {'0'185R:G -> '0'186R:A: adjacent_5p } 0 5 {'0'186R:A -> '0'185R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 '0'1967R:U 0 1 '0'1968R:A 0 2 '0'1969R:A 0 [Edges] 0 {'0'1967R:U -> '0'1968R:A: adjacent_5p } 0 1 {'0'1968R:A -> '0'1967R:U: adjacent_3p } 0 2 {'0'1967R:U -> '0'1969R:A: pairing parallel cis one_hbond 47 Ws/Hw } 0 3 {'0'1969R:A -> '0'1967R:U: pairing parallel cis one_hbond 47 Hw/Ws } 0 4 {'0'1968R:A -> '0'1969R:A: adjacent_5p upward } 0 5 {'0'1969R:A -> '0'1968R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 '0'1981R:A 0 1 '0'1982R:C 0 2 '0'1983R:C 0 [Edges] 0 {'0'1981R:A -> '0'1982R:C: adjacent_5p } 0 1 {'0'1982R:C -> '0'1981R:A: adjacent_3p } 0 2 {'0'1981R:A -> '0'1983R:C: pairing parallel trans one_hbond 73 Ss/Wh } 0 3 {'0'1983R:C -> '0'1981R:A: pairing parallel trans one_hbond 73 Wh/Ss } 0 4 {'0'1982R:C -> '0'1983R:C: adjacent_5p upward } 0 5 {'0'1983R:C -> '0'1982R:C: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 '0'2116R:U 0 1 '0'2117R:U 0 2 '0'2118R:A 0 [Edges] 0 {'0'2116R:U -> '0'2117R:U: adjacent_5p } 0 1 {'0'2117R:U -> '0'2116R:U: adjacent_3p } 0 2 {'0'2116R:U -> '0'2118R:A: pairing parallel cis XXIII Ww/Hh } 0 3 {'0'2118R:A -> '0'2116R:U: pairing parallel cis XXIII Hh/Ww } 0 4 {'0'2117R:U -> '0'2118R:A: adjacent_5p } 0 5 {'0'2118R:A -> '0'2117R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 '0'2289R:G 0 1 '0'2290R:U 0 2 '0'2291R:A 0 [Edges] 0 {'0'2289R:G -> '0'2290R:U: adjacent_5p upward } 0 1 {'0'2290R:U -> '0'2289R:G: adjacent_3p downward } 0 2 {'0'2289R:G -> '0'2291R:A: pairing parallel trans one_hbond Sw/Ww } 0 3 {'0'2291R:A -> '0'2289R:G: pairing parallel trans one_hbond Ww/Sw } 0 4 {'0'2290R:U -> '0'2291R:A: adjacent_5p } 0 5 {'0'2291R:A -> '0'2290R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 '0'2525R:G 0 1 '0'2526R:C 0 2 '0'2527R:U 0 [Edges] 0 {'0'2525R:G -> '0'2526R:C: adjacent_5p } 0 1 {'0'2526R:C -> '0'2525R:G: adjacent_3p } 0 2 {'0'2525R:G -> '0'2527R:U: pairing parallel cis one_hbond 89 Sw/Hw } 0 3 {'0'2527R:U -> '0'2525R:G: pairing parallel cis one_hbond 89 Hw/Sw } 0 4 {'0'2526R:C -> '0'2527R:U: adjacent_5p } 0 5 {'0'2527R:U -> '0'2526R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 '0'2554R:U 0 1 '0'2555R:C 0 2 '0'2556R:C 0 [Edges] 0 {'0'2554R:U -> '0'2555R:C: adjacent_5p } 0 1 {'0'2555R:C -> '0'2554R:U: adjacent_3p } 0 2 {'0'2554R:U -> '0'2556R:C: pairing parallel cis one_hbond 99 Ws/Hw } 0 3 {'0'2556R:C -> '0'2554R:U: pairing parallel cis one_hbond 99 Hw/Ws } 0 4 {'0'2555R:C -> '0'2556R:C: adjacent_5p } 0 5 {'0'2556R:C -> '0'2555R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 '0'2718R:C 0 1 '0'2719R:A 0 2 '0'2720R:C 0 [Edges] 0 {'0'2718R:C -> '0'2719R:A: adjacent_5p } 0 1 {'0'2719R:A -> '0'2718R:C: adjacent_3p } 0 2 {'0'2718R:C -> '0'2720R:C: pairing parallel cis one_hbond 134 Bs/Hw } 0 3 {'0'2720R:C -> '0'2718R:C: pairing parallel cis one_hbond 134 Hw/Bs } 0 4 {'0'2719R:A -> '0'2720R:C: adjacent_5p upward } 0 5 {'0'2720R:C -> '0'2719R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 '0'2791R:U 0 1 '0'2792R:A 0 2 '0'2793R:A 0 [Edges] 0 {'0'2791R:U -> '0'2792R:A: adjacent_5p } 0 1 {'0'2792R:A -> '0'2791R:U: adjacent_3p } 0 2 {'0'2791R:U -> '0'2793R:A: pairing parallel cis XXIII Ww/Hh } 0 3 {'0'2793R:A -> '0'2791R:U: pairing parallel cis XXIII Hh/Ww } 0 4 {'0'2792R:A -> '0'2793R:A: adjacent_5p upward } 0 5 {'0'2793R:A -> '0'2792R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 '9'3054R:A 0 1 '9'3055R:U 0 2 '9'3056R:A 0 [Edges] 0 {'9'3054R:A -> '9'3055R:U: adjacent_5p upward } 0 1 {'9'3055R:U -> '9'3054R:A: adjacent_3p downward } 0 2 {'9'3054R:A -> '9'3056R:A: pairing parallel cis one_hbond Ss/Hw } 0 3 {'9'3056R:A -> '9'3054R:A: pairing parallel cis one_hbond Hw/Ss } 0 4 {'9'3055R:U -> '9'3056R:A: adjacent_5p } 0 5 {'9'3056R:A -> '9'3055R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 '9'3065R:A 0 1 '9'3066R:G 0 2 '9'3067R:C 0 [Edges] 0 {'9'3065R:A -> '9'3066R:G: adjacent_5p } 0 1 {'9'3066R:G -> '9'3065R:A: adjacent_3p } 0 2 {'9'3065R:A -> '9'3067R:C: pairing parallel cis one_hbond Ss/Hw } 0 3 {'9'3067R:C -> '9'3065R:A: pairing parallel cis one_hbond Hw/Ss } 0 4 {'9'3066R:G -> '9'3067R:C: adjacent_5p upward } 0 5 {'9'3067R:C -> '9'3066R:G: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A115R:G 0 1 A116R:A 0 2 A117R:G 0 [Edges] 0 {A115R:G -> A116R:A: adjacent_5p } 0 1 {A116R:A -> A115R:G: adjacent_3p } 0 2 {A115R:G -> A117R:G: pairing parallel cis one_hbond 114 Sw/Wh } 0 3 {A117R:G -> A115R:G: pairing parallel cis one_hbond 114 Wh/Sw } 0 4 {A116R:A -> A117R:G: adjacent_5p upward } 0 5 {A117R:G -> A116R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 A429R:U 0 1 A430R:A 0 2 A431R:A 0 [Edges] 0 {A429R:U -> A430R:A: adjacent_5p } 0 1 {A430R:A -> A429R:U: adjacent_3p } 0 2 {A429R:U -> A431R:A: pairing parallel cis XXIII Ww/Hh } 0 3 {A431R:A -> A429R:U: pairing parallel cis XXIII Hh/Ww } 0 4 {A430R:A -> A431R:A: adjacent_5p upward } 0 5 {A431R:A -> A430R:A: adjacent_3p downward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 A991R:U 0 1 A992R:U 0 2 A993R:G 0 [Edges] 0 {A991R:U -> A992R:U: adjacent_5p } 0 1 {A992R:U -> A991R:U: adjacent_3p } 0 2 {A991R:U -> A993R:G: pairing parallel cis one_hbond Ss/C8 } 0 3 {A993R:G -> A991R:U: pairing parallel cis one_hbond C8/Ss } 0 4 {A992R:U -> A993R:G: adjacent_5p } 0 5 {A993R:G -> A992R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 A1379R:G 0 1 A1380R:U 0 2 A1381R:U 0 [Edges] 0 {A1379R:G -> A1380R:U: adjacent_5p upward } 0 1 {A1380R:U -> A1379R:G: adjacent_3p downward } 0 2 {A1379R:G -> A1381R:U: pairing parallel cis one_hbond 89 Sw/Hw } 0 3 {A1381R:U -> A1379R:G: pairing parallel cis one_hbond 89 Hw/Sw } 0 4 {A1380R:U -> A1381R:U: adjacent_5p } 0 5 {A1381R:U -> A1380R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A184R:U 0 1 A185R:U 0 2 A186R:A 0 [Edges] 0 {A184R:U -> A185R:U: adjacent_5p } 0 1 {A185R:U -> A184R:U: adjacent_3p } 0 2 {A184R:U -> A186R:A: pairing parallel trans one_hbond Ss/Bs } 0 3 {A186R:A -> A184R:U: pairing parallel trans one_hbond Bs/Ss } 0 4 {A185R:U -> A186R:A: adjacent_5p inward } 0 5 {A186R:A -> A185R:U: adjacent_3p inward } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 '2'15R:C 0 1 '2'16R:U 0 2 '2'17R:C 0 [Edges] 0 {'2'15R:C -> '2'16R:U: adjacent_5p upward } 0 1 {'2'16R:U -> '2'15R:C: adjacent_3p downward } 0 2 {'2'15R:C -> '2'17R:C: pairing antiparallel trans one_hbond Ws/Hw } 0 3 {'2'17R:C -> '2'15R:C: pairing antiparallel trans one_hbond Hw/Ws } 0 4 {'2'16R:U -> '2'17R:C: adjacent_5p pairing antiparallel trans 97 Bs/Hh } 0 5 {'2'17R:C -> '2'16R:U: adjacent_3p pairing antiparallel trans 97 Hh/Bs } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 C32R:C 0 1 C33R:U 0 2 C34R:C 0 [Edges] 0 {C32R:C -> C33R:U: adjacent_5p upward } 0 1 {C33R:U -> C32R:C: adjacent_3p downward } 0 2 {C32R:C -> C34R:C: pairing parallel trans one_hbond 134 Ws/Hw } 0 3 {C34R:C -> C32R:C: pairing parallel trans one_hbond 134 Hw/Ws } 0 4 {C33R:U -> C34R:C: adjacent_5p } 0 5 {C34R:C -> C33R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . [GraphModel] [Vertices] 0 D32R:C 0 1 D33R:U 0 2 D34R:C 0 [Edges] 0 {D32R:C -> D33R:U: adjacent_5p upward } 0 1 {D33R:U -> D32R:C: adjacent_3p downward } 0 2 {D32R:C -> D34R:C: pairing parallel cis one_hbond 134 Ws/Hw } 0 3 {D34R:C -> D32R:C: pairing parallel cis one_hbond 134 Hw/Ws } 0 4 {D33R:U -> D34R:C: adjacent_5p } 0 5 {D34R:C -> D33R:U: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A10R:G 0 1 A11R:C 0 2 A12R:G 0 [Edges] 0 {A10R:G -> A11R:C: adjacent_5p } 0 1 {A11R:C -> A10R:G: adjacent_3p } 0 2 {A10R:G -> A12R:G: pairing parallel cis one_hbond 113 Ws/Hw } 0 3 {A12R:G -> A10R:G: pairing parallel cis one_hbond 113 Hw/Ws } 0 4 {A11R:C -> A12R:G: adjacent_5p } 0 5 {A12R:G -> A11R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 B198R:G 0 1 B199R:C 0 2 B200R:A 0 [Edges] 0 {B198R:G -> B199R:C: adjacent_5p } 0 1 {B199R:C -> B198R:G: adjacent_3p } 0 2 {B198R:G -> B200R:A: pairing parallel trans X Ss/Ww } 0 3 {B200R:A -> B198R:G: pairing parallel trans X Ww/Ss } 0 4 {B199R:C -> B200R:A: adjacent_5p } 0 5 {B200R:A -> B199R:C: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 . MOLECULE: [GraphModel] [Vertices] 0 A88R:C 0 1 A89R:G 0 2 A89.AR:A 0 [Edges] 0 {A88R:C -> A89R:G: adjacent_5p } 0 1 {A89R:G -> A88R:C: adjacent_3p } 0 2 {A88R:C -> A89.AR:A: pairing parallel trans one_hbond Hh/Ww } 0 3 {A89.AR:A -> A88R:C: pairing parallel trans one_hbond Ww/Hh } 0 4 {A89R:G -> A89.AR:A: adjacent_5p } 0 5 {A89.AR:A -> A89R:G: adjacent_3p } 0 [Adjacency matrix] 0 1 2 0 . 0 2 1 1 . 4 2 3 5 .